RNA–Protein interactions for RNA: ENST00000638336.1

SLC35A3-208, Transcript of solute carrier family 35 member A3, humanhuman

TSL 1 (best) BASIC

Gene SLC35A3, Length 2,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-208ENST00000638336 NISCHQ9Y2I1 1504 aa43.54■■■■■ 4.56
SLC35A3-208ENST00000638336 CCDC180Q9P1Z9 1646 aa37.09■■■■□ 3.53
SLC35A3-208ENST00000638336 SHROOM4Q9ULL8 1493 aa37.04■■■■□ 3.52
SLC35A3-208ENST00000638336 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
SLC35A3-208ENST00000638336 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
SLC35A3-208ENST00000638336 SUPT5HO00267 1087 aaKnown RBP36.17■■■■□ 3.38
SLC35A3-208ENST00000638336 DCAF1Q9Y4B6 1507 aa35.66■■■■□ 3.3
SLC35A3-208ENST00000638336 CHIC1Q5VXU3 224 aa34.94■■■■□ 3.18
SLC35A3-208ENST00000638336 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
SLC35A3-208ENST00000638336 ABCC9O60706 1549 aa34.79■■■■□ 3.16
SLC35A3-208ENST00000638336 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
SLC35A3-208ENST00000638336 NACADO15069 1562 aa34.41■■■■□ 3.1
SLC35A3-208ENST00000638336 RSF1Q96T23 1441 aaPredicted RBP34.36■■■■□ 3.09
SLC35A3-208ENST00000638336 CECR2Q9BXF3 1484 aa34.04■■■■□ 3.04
SLC35A3-208ENST00000638336 LOC105371045A0A1W2PR82 267 aa33.95■■■■□ 3.03
SLC35A3-208ENST00000638336 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
SLC35A3-208ENST00000638336 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
SLC35A3-208ENST00000638336 TRIM41Q8WV44 630 aa33.68■■■□□ 2.98
SLC35A3-208ENST00000638336 WIZO95785 1651 aa33.65■■■□□ 2.98
SLC35A3-208ENST00000638336 PCGF6Q9BYE7 350 aa33.58■■■□□ 2.97
SLC35A3-208ENST00000638336 FAM9AQ8IZU1 332 aaPredicted RBP33.46■■■□□ 2.95
SLC35A3-208ENST00000638336 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
SLC35A3-208ENST00000638336 UNC13AQ9UPW8 1703 aa33.37■■■□□ 2.93
SLC35A3-208ENST00000638336 HRCP23327 699 aa33.28■■■□□ 2.92
SLC35A3-208ENST00000638336 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
SLC35A3-208ENST00000638336 EHMT2Q96KQ7 1210 aa33.24■■■□□ 2.91
SLC35A3-208ENST00000638336 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
SLC35A3-208ENST00000638336 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
SLC35A3-208ENST00000638336 BICRAQ9NZM4 1560 aa33.03■■■□□ 2.88
SLC35A3-208ENST00000638336 CCDC88BA6NC98 1476 aa33■■■□□ 2.87
SLC35A3-208ENST00000638336 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
SLC35A3-208ENST00000638336 TRIM26Q12899 539 aaPredicted RBP32.96■■■□□ 2.87
SLC35A3-208ENST00000638336 SMARCA2P51531 1590 aa32.91■■■□□ 2.86
SLC35A3-208ENST00000638336 ABCC8Q09428 1581 aa32.82■■■□□ 2.85
SLC35A3-208ENST00000638336 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
SLC35A3-208ENST00000638336 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
SLC35A3-208ENST00000638336 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
SLC35A3-208ENST00000638336 SOGA1O94964 1423 aa32.47■■■□□ 2.79
SLC35A3-208ENST00000638336 BAZ1BQ9UIG0 1483 aaKnown RBP32.39■■■□□ 2.78
SLC35A3-208ENST00000638336 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
SLC35A3-208ENST00000638336 WRNQ14191 1432 aaPredicted RBP eCLIP32.3■■■□□ 2.76
SLC35A3-208ENST00000638336 CSRNP3Q8WYN3 585 aa32.25■■■□□ 2.75
SLC35A3-208ENST00000638336 EEA1Q15075 1411 aa32.16■■■□□ 2.74
SLC35A3-208ENST00000638336 UBTFP17480 764 aaKnown RBP32.16■■■□□ 2.74
SLC35A3-208ENST00000638336 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
SLC35A3-208ENST00000638336 SYNJ1O43426 1573 aa32.13■■■□□ 2.73
SLC35A3-208ENST00000638336 TNIKQ9UKE5 1360 aa32.09■■■□□ 2.73
SLC35A3-208ENST00000638336 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
SLC35A3-208ENST00000638336 ZEB1P37275 1124 aaPredicted RBP32.03■■■□□ 2.72
SLC35A3-208ENST00000638336 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
SLC35A3-208ENST00000638336 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
SLC35A3-208ENST00000638336 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.68
SLC35A3-208ENST00000638336 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
SLC35A3-208ENST00000638336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.78■■■□□ 2.68
SLC35A3-208ENST00000638336 TOP2BQ02880 1626 aa31.73■■■□□ 2.67
SLC35A3-208ENST00000638336 KIF21BO75037 1637 aa31.72■■■□□ 2.67
SLC35A3-208ENST00000638336 RANGAP1P46060 587 aaPredicted RBP31.69■■■□□ 2.66
SLC35A3-208ENST00000638336 RAPGEF2Q9Y4G8 1499 aa31.68■■■□□ 2.66
SLC35A3-208ENST00000638336 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
SLC35A3-208ENST00000638336 CLIP1P30622 1438 aa31.63■■■□□ 2.65
SLC35A3-208ENST00000638336 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
SLC35A3-208ENST00000638336 CFTRP13569 1480 aa31.55■■■□□ 2.64
SLC35A3-208ENST00000638336 CUX1P39880 1505 aa31.54■■■□□ 2.64
SLC35A3-208ENST00000638336 VPS8Q8N3P4 1428 aa31.42■■■□□ 2.62
SLC35A3-208ENST00000638336 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
SLC35A3-208ENST00000638336 APLP2Q06481 763 aa31.35■■■□□ 2.61
SLC35A3-208ENST00000638336 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
SLC35A3-208ENST00000638336 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
SLC35A3-208ENST00000638336 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
SLC35A3-208ENST00000638336 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
SLC35A3-208ENST00000638336 HNRNPUL2Q1KMD3 747 aaKnown RBP31.26■■■□□ 2.6
SLC35A3-208ENST00000638336 PRDM2Q13029 1718 aa31.14■■■□□ 2.58
SLC35A3-208ENST00000638336 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
SLC35A3-208ENST00000638336 CUX2O14529 1486 aa31.13■■■□□ 2.57
SLC35A3-208ENST00000638336 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
SLC35A3-208ENST00000638336 IGF1RP08069 1367 aa31.03■■■□□ 2.56
SLC35A3-208ENST00000638336 KANK4Q5T7N3 995 aaPredicted RBP30.99■■■□□ 2.55
SLC35A3-208ENST00000638336 FANCD2Q9BXW9 1451 aa30.99■■■□□ 2.55
SLC35A3-208ENST00000638336 ARHGAP35Q9NRY4 1499 aa30.93■■■□□ 2.54
SLC35A3-208ENST00000638336 NESP48681 1621 aa30.91■■■□□ 2.54
SLC35A3-208ENST00000638336 CARMIL1Q5VZK9 1371 aa30.9■■■□□ 2.54
SLC35A3-208ENST00000638336 DIEXFQ68CQ4 756 aaKnown RBP30.82■■■□□ 2.52
SLC35A3-208ENST00000638336 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
SLC35A3-208ENST00000638336 DNMBPQ6XZF7 1577 aa30.74■■■□□ 2.51
SLC35A3-208ENST00000638336 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
SLC35A3-208ENST00000638336 POLA1P09884 1462 aaPredicted RBP30.72■■■□□ 2.51
SLC35A3-208ENST00000638336 DNAJC5BQ9UF47 199 aa30.69■■■□□ 2.5
SLC35A3-208ENST00000638336 P3H3Q8IVL6 736 aa30.68■■■□□ 2.5
SLC35A3-208ENST00000638336 ZNF316A6NFI3 1004 aaPredicted RBP30.66■■■□□ 2.5
SLC35A3-208ENST00000638336 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
SLC35A3-208ENST00000638336 RRBP1Q9P2E9 1410 aaKnown RBP30.61■■■□□ 2.49
SLC35A3-208ENST00000638336 ITGAEP38570 1179 aa30.61■■■□□ 2.49
SLC35A3-208ENST00000638336 CCNB3Q8WWL7 1395 aa30.56■■■□□ 2.48
SLC35A3-208ENST00000638336 ATP1B4Q9UN42 357 aaPredicted RBP30.56■■■□□ 2.48
SLC35A3-208ENST00000638336 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
SLC35A3-208ENST00000638336 LAMC3Q9Y6N6 1575 aa30.53■■■□□ 2.48
SLC35A3-208ENST00000638336 DHX57Q6P158 1386 aaKnown RBP30.51■■■□□ 2.47
SLC35A3-208ENST00000638336 TIAM1Q13009 1591 aa30.5■■■□□ 2.47
SLC35A3-208ENST00000638336 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
SLC35A3-208ENST00000638336 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms