RNA–Protein interactions for RNA: ENST00000335012.2

C3orf70-201, Transcript of chromosome 3 open reading frame 70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf70, Length 5,901 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf70-201ENST00000335012 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
C3orf70-201ENST00000335012 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
C3orf70-201ENST00000335012 PELP1Q8IZL8 1130 aaKnown RBP30.49■■■□□ 2.47
C3orf70-201ENST00000335012 EHMT2Q96KQ7 1210 aa30.47■■■□□ 2.47
C3orf70-201ENST00000335012 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
C3orf70-201ENST00000335012 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
C3orf70-201ENST00000335012 APLP2Q06481 763 aa29.68■■■□□ 2.34
C3orf70-201ENST00000335012 PCGF6Q9BYE7 350 aa29.63■■■□□ 2.33
C3orf70-201ENST00000335012 TTBK1Q5TCY1 1321 aaPredicted RBP29.53■■■□□ 2.32
C3orf70-201ENST00000335012 FAM9AQ8IZU1 332 aaPredicted RBP29.45■■■□□ 2.31
C3orf70-201ENST00000335012 ERICH6Q7L0X2 663 aa29.43■■■□□ 2.3
C3orf70-201ENST00000335012 CENPBP07199 599 aaPredicted RBP29.36■■■□□ 2.29
C3orf70-201ENST00000335012 ZEB1P37275 1124 aaPredicted RBP29.11■■■□□ 2.25
C3orf70-201ENST00000335012 CCER1Q8TC90 406 aaPredicted RBP29.11■■■□□ 2.25
C3orf70-201ENST00000335012 RANGAP1P46060 587 aaPredicted RBP28.92■■■□□ 2.22
C3orf70-201ENST00000335012 YTHDC1Q96MU7 727 aaKnown RBP28.85■■■□□ 2.21
C3orf70-201ENST00000335012 MYT1Q01538 1121 aa28.79■■■□□ 2.2
C3orf70-201ENST00000335012 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
C3orf70-201ENST00000335012 NEFLP07196 543 aa28.68■■■□□ 2.18
C3orf70-201ENST00000335012 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
C3orf70-201ENST00000335012 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
C3orf70-201ENST00000335012 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
C3orf70-201ENST00000335012 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
C3orf70-201ENST00000335012 HRCP23327 699 aa28.11■■■□□ 2.09
C3orf70-201ENST00000335012 DAXXQ9UER7 740 aaPredicted RBP27.94■■■□□ 2.06
C3orf70-201ENST00000335012 POLR3GLQ9BT43 218 aa27.77■■■□□ 2.04
C3orf70-201ENST00000335012 ITGAEP38570 1179 aa27.76■■■□□ 2.03
C3orf70-201ENST00000335012 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
C3orf70-201ENST00000335012 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
C3orf70-201ENST00000335012 CNGB1Q14028 1251 aaPredicted RBP27.59■■■□□ 2.01
C3orf70-201ENST00000335012 DIEXFQ68CQ4 756 aaKnown RBP27.44■■□□□ 1.98
C3orf70-201ENST00000335012 RTL5Q5HYW3 569 aaPredicted RBP27.43■■□□□ 1.98
C3orf70-201ENST00000335012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.4■■□□□ 1.98
C3orf70-201ENST00000335012 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
C3orf70-201ENST00000335012 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
C3orf70-201ENST00000335012 MYT1LQ9UL68 1186 aa27.34■■□□□ 1.97
C3orf70-201ENST00000335012 CLSPNQ9HAW4 1339 aa27.2■■□□□ 1.94
C3orf70-201ENST00000335012 BCANQ96GW7 911 aa27.17■■□□□ 1.94
C3orf70-201ENST00000335012 GTF3C3Q9Y5Q9 886 aa27.15■■□□□ 1.94
C3orf70-201ENST00000335012 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
C3orf70-201ENST00000335012 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
C3orf70-201ENST00000335012 NEUROD1Q13562 356 aa26.91■■□□□ 1.9
C3orf70-201ENST00000335012 CDK11AQ9UQ88 783 aaPredicted RBP26.87■■□□□ 1.89
C3orf70-201ENST00000335012 TRIM52Q96A61 297 aa26.81■■□□□ 1.88
C3orf70-201ENST00000335012 ANP32CO43423 234 aa26.77■■□□□ 1.88
C3orf70-201ENST00000335012 ACIN1Q9UKV3 1341 aaKnown RBP26.64■■□□□ 1.86
C3orf70-201ENST00000335012 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
C3orf70-201ENST00000335012 ZBTB47Q9UFB7 747 aaPredicted RBP26.49■■□□□ 1.83
C3orf70-201ENST00000335012 CANXP27824 592 aaKnown RBP26.46■■□□□ 1.83
C3orf70-201ENST00000335012 ANP32AP39687 249 aaKnown RBP26.44■■□□□ 1.82
C3orf70-201ENST00000335012 BCL11AQ9H165 835 aa26.44■■□□□ 1.82
C3orf70-201ENST00000335012 NPM2Q86SE8 214 aaKnown RBP26.4■■□□□ 1.82
C3orf70-201ENST00000335012 FKBP8Q14318 412 aa26.25■■□□□ 1.79
C3orf70-201ENST00000335012 EIF5BO60841 1220 aaKnown RBP26.25■■□□□ 1.79
C3orf70-201ENST00000335012 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
C3orf70-201ENST00000335012 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
C3orf70-201ENST00000335012 NEFMP07197 916 aa26.05■■□□□ 1.76
C3orf70-201ENST00000335012 P3H3Q8IVL6 736 aa26.03■■□□□ 1.76
C3orf70-201ENST00000335012 ANP32BQ92688 251 aaKnown RBP26.01■■□□□ 1.75
C3orf70-201ENST00000335012 ARID3CA6NKF2 412 aa26■■□□□ 1.75
C3orf70-201ENST00000335012 HNRNPUQ00839 825 aaKnown RBP eCLIP25.97■■□□□ 1.75
C3orf70-201ENST00000335012 NBR1Q14596 966 aa25.97■■□□□ 1.75
C3orf70-201ENST00000335012 HSP90AA1P07900 732 aaKnown RBP25.92■■□□□ 1.74
C3orf70-201ENST00000335012 FBLN2P98095 1184 aa25.91■■□□□ 1.74
C3orf70-201ENST00000335012 FAM9BQ8IZU0 186 aa25.91■■□□□ 1.74
C3orf70-201ENST00000335012 DDX10Q13206 875 aaKnown RBP25.87■■□□□ 1.73
C3orf70-201ENST00000335012 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
C3orf70-201ENST00000335012 ZNF777Q9ULD5 760 aaPredicted RBP25.85■■□□□ 1.73
C3orf70-201ENST00000335012 TONSLQ96HA7 1378 aa25.84■■□□□ 1.73
C3orf70-201ENST00000335012 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
C3orf70-201ENST00000335012 UPF2Q9HAU5 1272 aaKnown RBP25.84■■□□□ 1.73
C3orf70-201ENST00000335012 GLIPR1L2Q4G1C9 344 aa25.83■■□□□ 1.73
C3orf70-201ENST00000335012 ABCC9O60706 1549 aa25.81■■□□□ 1.72
C3orf70-201ENST00000335012 SALL2Q9Y467 1007 aaPredicted RBP25.8■■□□□ 1.72
C3orf70-201ENST00000335012 ARXQ96QS3 562 aa25.78■■□□□ 1.72
C3orf70-201ENST00000335012 CCDC136Q96JN2 1154 aa25.76■■□□□ 1.71
C3orf70-201ENST00000335012 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
C3orf70-201ENST00000335012 IRX6P78412 446 aaPredicted RBP25.68■■□□□ 1.7
C3orf70-201ENST00000335012 MIER1Q8N108 512 aa25.62■■□□□ 1.69
C3orf70-201ENST00000335012 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
C3orf70-201ENST00000335012 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
C3orf70-201ENST00000335012 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
C3orf70-201ENST00000335012 MRS2Q9HD23 443 aa25.53■■□□□ 1.68
C3orf70-201ENST00000335012 WDR43Q15061 677 aaKnown RBP eCLIP25.47■■□□□ 1.67
C3orf70-201ENST00000335012 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.67
C3orf70-201ENST00000335012 HIRIP3Q9BW71 556 aaPredicted RBP25.45■■□□□ 1.66
C3orf70-201ENST00000335012 STAG3Q9UJ98 1225 aa25.36■■□□□ 1.65
C3orf70-201ENST00000335012 DDRGK1Q96HY6 314 aa25.34■■□□□ 1.65
C3orf70-201ENST00000335012 KDM2AQ9Y2K7 1162 aa25.34■■□□□ 1.65
C3orf70-201ENST00000335012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.33■■□□□ 1.65
C3orf70-201ENST00000335012 ANP32EQ9BTT0 268 aa25.33■■□□□ 1.64
C3orf70-201ENST00000335012 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
C3orf70-201ENST00000335012 BECN1Q14457 450 aa25.26■■□□□ 1.63
C3orf70-201ENST00000335012 TRIM44Q96DX7 344 aaPredicted RBP25.25■■□□□ 1.63
C3orf70-201ENST00000335012 MYH16Q9H6N6 1097 aa25.24■■□□□ 1.63
C3orf70-201ENST00000335012 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
C3orf70-201ENST00000335012 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
C3orf70-201ENST00000335012 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.62
C3orf70-201ENST00000335012 SENP3-EIF4A1A0A087X0R7 540 aa25.16■■□□□ 1.62
C3orf70-201ENST00000335012 NCLP19338 710 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms