RNA–Protein interactions for RNA: ENST00000379268.6

TNFRSF18-203, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 1,179 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-203ENST00000379268 NISCHQ9Y2I1 1504 aa52.26■■■■■ 5.96
TNFRSF18-203ENST00000379268 CCDC180Q9P1Z9 1646 aa46.79■■■■■ 5.08
TNFRSF18-203ENST00000379268 ABCC9O60706 1549 aa46.41■■■■■ 5.02
TNFRSF18-203ENST00000379268 RB1CC1Q8TDY2 1594 aa44.38■■■■■ 4.69
TNFRSF18-203ENST00000379268 NACADO15069 1562 aa44.17■■■■■ 4.66
TNFRSF18-203ENST00000379268 DCAF8L2P0C7V8 631 aa43.97■■■■■ 4.63
TNFRSF18-203ENST00000379268 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
TNFRSF18-203ENST00000379268 ZCCHC6Q5VYS8 1495 aaKnown RBP43.36■■■■■ 4.53
TNFRSF18-203ENST00000379268 UNC13AQ9UPW8 1703 aa43.35■■■■■ 4.53
TNFRSF18-203ENST00000379268 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
TNFRSF18-203ENST00000379268 DNAJC5BQ9UF47 199 aa43.24■■■■■ 4.51
TNFRSF18-203ENST00000379268 DCAF1Q9Y4B6 1507 aa43.23■■■■■ 4.51
TNFRSF18-203ENST00000379268 BICRAQ9NZM4 1560 aa43.03■■■■■ 4.48
TNFRSF18-203ENST00000379268 SCRIBQ14160 1630 aa42.57■■■■■ 4.4
TNFRSF18-203ENST00000379268 SHROOM4Q9ULL8 1493 aa42.56■■■■■ 4.4
TNFRSF18-203ENST00000379268 CC2D2AQ9P2K1 1620 aa41.97■■■■■ 4.31
TNFRSF18-203ENST00000379268 EIF4G1Q04637 1599 aaKnown RBP41.96■■■■■ 4.31
TNFRSF18-203ENST00000379268 CECR2Q9BXF3 1484 aa41.8■■■■■ 4.28
TNFRSF18-203ENST00000379268 NCAPD3P42695 1498 aa40.77■■■■■ 4.12
TNFRSF18-203ENST00000379268 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
TNFRSF18-203ENST00000379268 ATAD2BQ9ULI0 1458 aa40.66■■■■■ 4.1
TNFRSF18-203ENST00000379268 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
TNFRSF18-203ENST00000379268 BAZ1AQ9NRL2 1556 aaPredicted RBP40.57■■■■■ 4.08
TNFRSF18-203ENST00000379268 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
TNFRSF18-203ENST00000379268 PEG3Q9GZU2 1588 aa40.32■■■■■ 4.05
TNFRSF18-203ENST00000379268 BAZ1BQ9UIG0 1483 aaKnown RBP40.28■■■■■ 4.04
TNFRSF18-203ENST00000379268 MROH2BQ7Z745 1585 aa40.23■■■■■ 4.03
TNFRSF18-203ENST00000379268 ERCC6Q03468 1493 aa40.07■■■■■ 4.01
TNFRSF18-203ENST00000379268 NESP48681 1621 aa39.94■■■■□ 3.98
TNFRSF18-203ENST00000379268 CUX2O14529 1486 aa39.92■■■■□ 3.98
TNFRSF18-203ENST00000379268 LAMC3Q9Y6N6 1575 aa39.8■■■■□ 3.96
TNFRSF18-203ENST00000379268 WIZO95785 1651 aa39.77■■■■□ 3.96
TNFRSF18-203ENST00000379268 PDS5BQ9NTI5 1447 aa39.57■■■■□ 3.92
TNFRSF18-203ENST00000379268 DNAJC5Q9H3Z4 198 aa39.55■■■■□ 3.92
TNFRSF18-203ENST00000379268 RSF1Q96T23 1441 aaPredicted RBP39.54■■■■□ 3.92
TNFRSF18-203ENST00000379268 CADPSQ9ULU8 1353 aa39.53■■■■□ 3.92
TNFRSF18-203ENST00000379268 THOC2Q8NI27 1593 aaKnown RBP39.5■■■■□ 3.91
TNFRSF18-203ENST00000379268 KIF21AQ7Z4S6 1674 aa39.47■■■■□ 3.91
TNFRSF18-203ENST00000379268 TOP2AP11388 1531 aaKnown RBP39.31■■■■□ 3.88
TNFRSF18-203ENST00000379268 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
TNFRSF18-203ENST00000379268 CFTRP13569 1480 aa39.14■■■■□ 3.86
TNFRSF18-203ENST00000379268 CEP164Q9UPV0 1460 aa39.08■■■■□ 3.85
TNFRSF18-203ENST00000379268 FANCD2Q9BXW9 1451 aa39.06■■■■□ 3.84
TNFRSF18-203ENST00000379268 WDR62O43379 1518 aa39.05■■■■□ 3.84
TNFRSF18-203ENST00000379268 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
TNFRSF18-203ENST00000379268 PRDM2Q13029 1718 aa38.8■■■■□ 3.8
TNFRSF18-203ENST00000379268 URB2Q14146 1524 aaKnown RBP38.69■■■■□ 3.78
TNFRSF18-203ENST00000379268 ABCC8Q09428 1581 aa38.37■■■■□ 3.73
TNFRSF18-203ENST00000379268 TOPBP1Q92547 1522 aa38.36■■■■□ 3.73
TNFRSF18-203ENST00000379268 IFT140Q96RY7 1462 aa38.29■■■■□ 3.72
TNFRSF18-203ENST00000379268 DNMBPQ6XZF7 1577 aa38.25■■■■□ 3.71
TNFRSF18-203ENST00000379268 OSCARQ8IYS5 282 aa38.18■■■■□ 3.7
TNFRSF18-203ENST00000379268 ZNF608Q9ULD9 1512 aaPredicted RBP38.15■■■■□ 3.7
TNFRSF18-203ENST00000379268 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
TNFRSF18-203ENST00000379268 TARBP1Q13395 1621 aaKnown RBP37.99■■■■□ 3.67
TNFRSF18-203ENST00000379268 EIF4G3O43432 1585 aaKnown RBP37.97■■■■□ 3.67
TNFRSF18-203ENST00000379268 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
TNFRSF18-203ENST00000379268 TRIM41Q8WV44 630 aa37.89■■■■□ 3.66
TNFRSF18-203ENST00000379268 AQRO60306 1485 aaKnown RBP eCLIP37.87■■■■□ 3.65
TNFRSF18-203ENST00000379268 SOGA1O94964 1423 aa37.83■■■■□ 3.65
TNFRSF18-203ENST00000379268 RAD54L2Q9Y4B4 1467 aa37.81■■■■□ 3.64
TNFRSF18-203ENST00000379268 CUX1P39880 1505 aa37.79■■■■□ 3.64
TNFRSF18-203ENST00000379268 FGD5Q6ZNL6 1462 aa37.78■■■■□ 3.64
TNFRSF18-203ENST00000379268 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
TNFRSF18-203ENST00000379268 WDR97A6NE52 1622 aa37.68■■■■□ 3.62
TNFRSF18-203ENST00000379268 CHD1O14646 1710 aa37.64■■■■□ 3.62
TNFRSF18-203ENST00000379268 RIMBP3CA6NJZ7 1639 aa37.58■■■■□ 3.61
TNFRSF18-203ENST00000379268 RIMBP3BA6NNM3 1639 aa37.58■■■■□ 3.61
TNFRSF18-203ENST00000379268 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
TNFRSF18-203ENST00000379268 FBLN2P98095 1184 aa37.57■■■■□ 3.6
TNFRSF18-203ENST00000379268 ARHGEF11O15085 1522 aa37.51■■■■□ 3.6
TNFRSF18-203ENST00000379268 SNAPC4Q5SXM2 1469 aa37.48■■■■□ 3.59
TNFRSF18-203ENST00000379268 GRIN2BQ13224 1484 aa37.47■■■■□ 3.59
TNFRSF18-203ENST00000379268 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
TNFRSF18-203ENST00000379268 ABCA10Q8WWZ4 1543 aa37.4■■■■□ 3.58
TNFRSF18-203ENST00000379268 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
TNFRSF18-203ENST00000379268 GAPVD1Q14C86 1478 aa37.38■■■■□ 3.57
TNFRSF18-203ENST00000379268 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
TNFRSF18-203ENST00000379268 WRNQ14191 1432 aaPredicted RBP eCLIP37.32■■■■□ 3.56
TNFRSF18-203ENST00000379268 SYNJ2O15056 1496 aa37.31■■■■□ 3.56
TNFRSF18-203ENST00000379268 TOP2BQ02880 1626 aa37.3■■■■□ 3.56
TNFRSF18-203ENST00000379268 BIVM-ERCC5R4GMW8 1640 aa37.3■■■■□ 3.56
TNFRSF18-203ENST00000379268 ABCA5Q8WWZ7 1642 aa37.29■■■■□ 3.56
TNFRSF18-203ENST00000379268 SYNJ1O43426 1573 aa37.25■■■■□ 3.55
TNFRSF18-203ENST00000379268 CYB5RLQ6IPT4 315 aa37.23■■■■□ 3.55
TNFRSF18-203ENST00000379268 CLASP1Q7Z460 1538 aa37.22■■■■□ 3.55
TNFRSF18-203ENST00000379268 ARAP1Q96P48 1450 aa37.13■■■■□ 3.54
TNFRSF18-203ENST00000379268 GRIN2AQ12879 1464 aa36.98■■■■□ 3.51
TNFRSF18-203ENST00000379268 ADAMTS12P58397 1594 aa36.98■■■■□ 3.51
TNFRSF18-203ENST00000379268 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.5
TNFRSF18-203ENST00000379268 FHAD1B1AJZ9 1412 aa36.93■■■■□ 3.5
TNFRSF18-203ENST00000379268 NUP160Q12769 1436 aa36.85■■■■□ 3.49
TNFRSF18-203ENST00000379268 CEP170Q5SW79 1584 aa36.79■■■■□ 3.48
TNFRSF18-203ENST00000379268 TRHP20396 242 aaPredicted RBP36.71■■■■□ 3.47
TNFRSF18-203ENST00000379268 SHROOM2Q13796 1616 aa36.65■■■■□ 3.46
TNFRSF18-203ENST00000379268 ERCC6L2Q5T890 1561 aa36.61■■■■□ 3.45
TNFRSF18-203ENST00000379268 KIF27Q86VH2 1401 aa36.6■■■■□ 3.45
TNFRSF18-203ENST00000379268 IGF1RP08069 1367 aa36.54■■■■□ 3.44
TNFRSF18-203ENST00000379268 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
TNFRSF18-203ENST00000379268 CUL7Q14999 1698 aa36.47■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms