RNA–Protein interactions for RNA: ENST00000425346.5

CYB561D2-205, Transcript of cytochrome b561 family member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-205ENST00000425346 NISCHQ9Y2I1 1504 aa53.56■■■■■ 6.16
CYB561D2-205ENST00000425346 ABCC9O60706 1549 aa48.12■■■■■ 5.29
CYB561D2-205ENST00000425346 CCDC180Q9P1Z9 1646 aa47.91■■■■■ 5.26
CYB561D2-205ENST00000425346 RB1CC1Q8TDY2 1594 aa45.65■■■■■ 4.9
CYB561D2-205ENST00000425346 NACADO15069 1562 aa45.34■■■■■ 4.85
CYB561D2-205ENST00000425346 DNAJC5BQ9UF47 199 aa45.33■■■■■ 4.85
CYB561D2-205ENST00000425346 DCAF8L2P0C7V8 631 aa45.29■■■■■ 4.84
CYB561D2-205ENST00000425346 PABPN1Q86U42 306 aaKnown RBP eCLIP44.89■■■■■ 4.78
CYB561D2-205ENST00000425346 MYO15BQ96JP2 1530 aa44.71■■■■■ 4.75
CYB561D2-205ENST00000425346 UNC13AQ9UPW8 1703 aa44.69■■■■■ 4.74
CYB561D2-205ENST00000425346 BICRAQ9NZM4 1560 aa44.47■■■■■ 4.71
CYB561D2-205ENST00000425346 ZCCHC6Q5VYS8 1495 aaKnown RBP44.37■■■■■ 4.69
CYB561D2-205ENST00000425346 DCAF1Q9Y4B6 1507 aa44.16■■■■■ 4.66
CYB561D2-205ENST00000425346 SCRIBQ14160 1630 aa43.79■■■■■ 4.6
CYB561D2-205ENST00000425346 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
CYB561D2-205ENST00000425346 CC2D2AQ9P2K1 1620 aa43.41■■■■■ 4.54
CYB561D2-205ENST00000425346 EIF4G1Q04637 1599 aaKnown RBP43.31■■■■■ 4.52
CYB561D2-205ENST00000425346 CECR2Q9BXF3 1484 aa43.3■■■■■ 4.52
CYB561D2-205ENST00000425346 NCAPD3P42695 1498 aa41.95■■■■■ 4.31
CYB561D2-205ENST00000425346 ATAD2BQ9ULI0 1458 aa41.84■■■■■ 4.29
CYB561D2-205ENST00000425346 SMARCA4P51532 1647 aa41.74■■■■■ 4.27
CYB561D2-205ENST00000425346 SMARCA2P51531 1590 aa41.61■■■■■ 4.25
CYB561D2-205ENST00000425346 HMGXB3Q12766 1538 aa41.55■■■■■ 4.24
CYB561D2-205ENST00000425346 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
CYB561D2-205ENST00000425346 DNAJC5Q9H3Z4 198 aa41.48■■■■■ 4.23
CYB561D2-205ENST00000425346 ERCC6Q03468 1493 aa41.44■■■■■ 4.22
CYB561D2-205ENST00000425346 NESP48681 1621 aa41.38■■■■■ 4.22
CYB561D2-205ENST00000425346 BAZ1BQ9UIG0 1483 aaKnown RBP41.37■■■■■ 4.21
CYB561D2-205ENST00000425346 CUX2O14529 1486 aa41.34■■■■■ 4.21
CYB561D2-205ENST00000425346 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
CYB561D2-205ENST00000425346 PEG3Q9GZU2 1588 aa41.32■■■■■ 4.21
CYB561D2-205ENST00000425346 LAMC3Q9Y6N6 1575 aa40.91■■■■■ 4.14
CYB561D2-205ENST00000425346 THOC2Q8NI27 1593 aaKnown RBP40.84■■■■■ 4.13
CYB561D2-205ENST00000425346 WIZO95785 1651 aa40.81■■■■■ 4.12
CYB561D2-205ENST00000425346 KIF21AQ7Z4S6 1674 aa40.73■■■■■ 4.11
CYB561D2-205ENST00000425346 PDS5BQ9NTI5 1447 aa40.7■■■■■ 4.11
CYB561D2-205ENST00000425346 CADPSQ9ULU8 1353 aa40.69■■■■■ 4.1
CYB561D2-205ENST00000425346 RSF1Q96T23 1441 aaPredicted RBP40.48■■■■■ 4.07
CYB561D2-205ENST00000425346 MRC2Q9UBG0 1479 aa40.38■■■■■ 4.05
CYB561D2-205ENST00000425346 WDR62O43379 1518 aa40.27■■■■■ 4.04
CYB561D2-205ENST00000425346 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
CYB561D2-205ENST00000425346 CFTRP13569 1480 aa40.21■■■■■ 4.03
CYB561D2-205ENST00000425346 FANCD2Q9BXW9 1451 aa40.21■■■■■ 4.03
CYB561D2-205ENST00000425346 CEP164Q9UPV0 1460 aa40.19■■■■■ 4.02
CYB561D2-205ENST00000425346 URB2Q14146 1524 aaKnown RBP39.93■■■■□ 3.98
CYB561D2-205ENST00000425346 CCDC88BA6NC98 1476 aa39.86■■■■□ 3.97
CYB561D2-205ENST00000425346 TRIM41Q8WV44 630 aa39.65■■■■□ 3.94
CYB561D2-205ENST00000425346 PRDM2Q13029 1718 aa39.64■■■■□ 3.94
CYB561D2-205ENST00000425346 OSCARQ8IYS5 282 aa39.55■■■■□ 3.92
CYB561D2-205ENST00000425346 ZNF608Q9ULD9 1512 aaPredicted RBP39.47■■■■□ 3.91
CYB561D2-205ENST00000425346 TOPBP1Q92547 1522 aa39.45■■■■□ 3.91
CYB561D2-205ENST00000425346 IFT140Q96RY7 1462 aa39.4■■■■□ 3.9
CYB561D2-205ENST00000425346 ABCC8Q09428 1581 aa39.24■■■■□ 3.87
CYB561D2-205ENST00000425346 DNMBPQ6XZF7 1577 aa39.24■■■■□ 3.87
CYB561D2-205ENST00000425346 EIF4G3O43432 1585 aaKnown RBP39.13■■■■□ 3.85
CYB561D2-205ENST00000425346 AQRO60306 1485 aaKnown RBP eCLIP39.11■■■■□ 3.856e-8■■■□□ 16
CYB561D2-205ENST00000425346 TARBP1Q13395 1621 aaKnown RBP39.1■■■■□ 3.85
CYB561D2-205ENST00000425346 POLA1P09884 1462 aaPredicted RBP39.06■■■■□ 3.84
CYB561D2-205ENST00000425346 RIMBP3CA6NJZ7 1639 aa39■■■■□ 3.83
CYB561D2-205ENST00000425346 RIMBP3BA6NNM3 1639 aa39■■■■□ 3.83
CYB561D2-205ENST00000425346 RIMBP3Q9UFD9 1639 aa39■■■■□ 3.83
CYB561D2-205ENST00000425346 RAD54L2Q9Y4B4 1467 aa38.99■■■■□ 3.83
CYB561D2-205ENST00000425346 ARHGEF11O15085 1522 aa38.89■■■■□ 3.82
CYB561D2-205ENST00000425346 SOGA1O94964 1423 aa38.89■■■■□ 3.82
CYB561D2-205ENST00000425346 TDRD9Q8NDG6 1382 aaKnown RBP38.88■■■■□ 3.81
CYB561D2-205ENST00000425346 CHD1O14646 1710 aa38.83■■■■□ 3.81
CYB561D2-205ENST00000425346 FBLN2P98095 1184 aa38.82■■■■□ 3.8
CYB561D2-205ENST00000425346 FGD5Q6ZNL6 1462 aa38.81■■■■□ 3.8
CYB561D2-205ENST00000425346 CUX1P39880 1505 aa38.8■■■■□ 3.8
CYB561D2-205ENST00000425346 SUPT5HO00267 1087 aaKnown RBP38.72■■■■□ 3.79
CYB561D2-205ENST00000425346 CYB5RLQ6IPT4 315 aa38.69■■■■□ 3.78
CYB561D2-205ENST00000425346 SNAPC4Q5SXM2 1469 aa38.64■■■■□ 3.78
CYB561D2-205ENST00000425346 ARAP1Q96P48 1450 aa38.55■■■■□ 3.76
CYB561D2-205ENST00000425346 WDR97A6NE52 1622 aa38.54■■■■□ 3.76
CYB561D2-205ENST00000425346 CHMP7Q8WUX9 453 aaPredicted RBP38.5■■■■□ 3.75
CYB561D2-205ENST00000425346 GRIN2BQ13224 1484 aa38.5■■■■□ 3.75
CYB561D2-205ENST00000425346 MAGI1Q96QZ7 1491 aaPredicted RBP38.46■■■■□ 3.75
CYB561D2-205ENST00000425346 CLASP1Q7Z460 1538 aa38.42■■■■□ 3.74
CYB561D2-205ENST00000425346 GAPVD1Q14C86 1478 aa38.38■■■■□ 3.73
CYB561D2-205ENST00000425346 SYNJ2O15056 1496 aa38.37■■■■□ 3.73
CYB561D2-205ENST00000425346 ABCA10Q8WWZ4 1543 aa38.34■■■■□ 3.73
CYB561D2-205ENST00000425346 SYNJ1O43426 1573 aa38.31■■■■□ 3.72
CYB561D2-205ENST00000425346 PBRM1Q86U86 1689 aa38.29■■■■□ 3.72
CYB561D2-205ENST00000425346 ABCA5Q8WWZ7 1642 aa38.27■■■■□ 3.72
CYB561D2-205ENST00000425346 TRHP20396 242 aaPredicted RBP38.19■■■■□ 3.7
CYB561D2-205ENST00000425346 WRNQ14191 1432 aaPredicted RBP eCLIP38.18■■■■□ 3.7
CYB561D2-205ENST00000425346 TOP2BQ02880 1626 aa38.11■■■■□ 3.69
CYB561D2-205ENST00000425346 BIVM-ERCC5R4GMW8 1640 aa38.09■■■■□ 3.69
CYB561D2-205ENST00000425346 GRIN2AQ12879 1464 aa38.01■■■■□ 3.68
CYB561D2-205ENST00000425346 ADAMTS12P58397 1594 aa37.97■■■■□ 3.67
CYB561D2-205ENST00000425346 ERCC6L2Q5T890 1561 aa37.94■■■■□ 3.66
CYB561D2-205ENST00000425346 CEP170Q5SW79 1584 aa37.92■■■■□ 3.66
CYB561D2-205ENST00000425346 NUP160Q12769 1436 aa37.91■■■■□ 3.66
CYB561D2-205ENST00000425346 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.65
CYB561D2-205ENST00000425346 ERICH3Q5RHP9 1530 aa37.81■■■■□ 3.64
CYB561D2-205ENST00000425346 SHROOM2Q13796 1616 aa37.71■■■■□ 3.63
CYB561D2-205ENST00000425346 JPH4Q96JJ6 628 aa37.58■■■■□ 3.61
CYB561D2-205ENST00000425346 PRG4Q92954 1404 aaPredicted RBP37.56■■■■□ 3.6
CYB561D2-205ENST00000425346 IGF1RP08069 1367 aa37.48■■■■□ 3.59
CYB561D2-205ENST00000425346 RUSC2Q8N2Y8 1516 aa37.43■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms