RNA–Protein interactions for RNA: ENST00000334497.6

TREX2-202, Transcript of three prime repair exonuclease 2, humanhuman

TSL 1 (best) BASIC

Gene TREX2, Length 1,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-202ENST00000334497 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
TREX2-202ENST00000334497 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
TREX2-202ENST00000334497 ZCCHC6Q5VYS8 1495 aaKnown RBP39.78■■■■□ 3.96
TREX2-202ENST00000334497 ABCC9O60706 1549 aa39.72■■■■□ 3.95
TREX2-202ENST00000334497 DCAF8L2P0C7V8 631 aa39.37■■■■□ 3.89
TREX2-202ENST00000334497 DCAF1Q9Y4B6 1507 aa39.23■■■■□ 3.87
TREX2-202ENST00000334497 MYO15BQ96JP2 1530 aa38.93■■■■□ 3.82
TREX2-202ENST00000334497 NACADO15069 1562 aa38.83■■■■□ 3.81
TREX2-202ENST00000334497 RB1CC1Q8TDY2 1594 aa38.62■■■■□ 3.77
TREX2-202ENST00000334497 SHROOM4Q9ULL8 1493 aa38.44■■■■□ 3.74
TREX2-202ENST00000334497 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
TREX2-202ENST00000334497 UNC13AQ9UPW8 1703 aa37.81■■■■□ 3.64
TREX2-202ENST00000334497 BICRAQ9NZM4 1560 aa37.43■■■■□ 3.58
TREX2-202ENST00000334497 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
TREX2-202ENST00000334497 CECR2Q9BXF3 1484 aa36.91■■■■□ 3.5
TREX2-202ENST00000334497 SUPT5HO00267 1087 aaKnown RBP36.77■■■■□ 3.48
TREX2-202ENST00000334497 BAZ1AQ9NRL2 1556 aaPredicted RBP36.69■■■■□ 3.46
TREX2-202ENST00000334497 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
TREX2-202ENST00000334497 RSF1Q96T23 1441 aaPredicted RBP36.64■■■■□ 3.46
TREX2-202ENST00000334497 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
TREX2-202ENST00000334497 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
TREX2-202ENST00000334497 WIZO95785 1651 aa36.34■■■■□ 3.41
TREX2-202ENST00000334497 PEG3Q9GZU2 1588 aa36.14■■■■□ 3.38
TREX2-202ENST00000334497 ATAD2BQ9ULI0 1458 aa36.08■■■■□ 3.37
TREX2-202ENST00000334497 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
TREX2-202ENST00000334497 TOP2AP11388 1531 aaKnown RBP35.95■■■■□ 3.34
TREX2-202ENST00000334497 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
TREX2-202ENST00000334497 BAZ1BQ9UIG0 1483 aaKnown RBP35.87■■■■□ 3.33
TREX2-202ENST00000334497 NCAPD3P42695 1498 aa35.83■■■■□ 3.33
TREX2-202ENST00000334497 HMGXB3Q12766 1538 aa35.76■■■■□ 3.31
TREX2-202ENST00000334497 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
TREX2-202ENST00000334497 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
TREX2-202ENST00000334497 CHIC1Q5VXU3 224 aa34.94■■■■□ 3.18
TREX2-202ENST00000334497 CFTRP13569 1480 aa34.93■■■■□ 3.18
TREX2-202ENST00000334497 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
TREX2-202ENST00000334497 PRDM2Q13029 1718 aa34.74■■■■□ 3.15
TREX2-202ENST00000334497 NESP48681 1621 aa34.73■■■■□ 3.15
TREX2-202ENST00000334497 LAMC3Q9Y6N6 1575 aa34.7■■■■□ 3.15
TREX2-202ENST00000334497 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
TREX2-202ENST00000334497 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
TREX2-202ENST00000334497 WRNQ14191 1432 aaPredicted RBP eCLIP34.52■■■■□ 3.12
TREX2-202ENST00000334497 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
TREX2-202ENST00000334497 PDS5BQ9NTI5 1447 aa34.45■■■■□ 3.11
TREX2-202ENST00000334497 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
TREX2-202ENST00000334497 CEP164Q9UPV0 1460 aa34.35■■■■□ 3.09
TREX2-202ENST00000334497 KIF21AQ7Z4S6 1674 aa34.32■■■■□ 3.08
TREX2-202ENST00000334497 CUX1P39880 1505 aa34.3■■■■□ 3.08
TREX2-202ENST00000334497 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
TREX2-202ENST00000334497 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
TREX2-202ENST00000334497 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
TREX2-202ENST00000334497 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
TREX2-202ENST00000334497 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
TREX2-202ENST00000334497 TOPBP1Q92547 1522 aa34.1■■■■□ 3.05
TREX2-202ENST00000334497 MRC2Q9UBG0 1479 aa34.03■■■■□ 3.04
TREX2-202ENST00000334497 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
TREX2-202ENST00000334497 FAM9AQ8IZU1 332 aaPredicted RBP33.96■■■■□ 3.03
TREX2-202ENST00000334497 SOGA1O94964 1423 aa33.95■■■■□ 3.02
TREX2-202ENST00000334497 POLA1P09884 1462 aaPredicted RBP33.9■■■■□ 3.02
TREX2-202ENST00000334497 WDR62O43379 1518 aa33.87■■■■□ 3.01
TREX2-202ENST00000334497 THOC2Q8NI27 1593 aaKnown RBP33.86■■■■□ 3.01
TREX2-202ENST00000334497 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
TREX2-202ENST00000334497 EEA1Q15075 1411 aa33.79■■■■□ 3
TREX2-202ENST00000334497 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
TREX2-202ENST00000334497 CUX2O14529 1486 aa33.71■■■□□ 2.99
TREX2-202ENST00000334497 KIF27Q86VH2 1401 aa33.69■■■□□ 2.98
TREX2-202ENST00000334497 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
TREX2-202ENST00000334497 CSRNP3Q8WYN3 585 aa33.65■■■□□ 2.98
TREX2-202ENST00000334497 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
TREX2-202ENST00000334497 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
TREX2-202ENST00000334497 LOC105371045A0A1W2PR82 267 aa33.6■■■□□ 2.97
TREX2-202ENST00000334497 IFT140Q96RY7 1462 aa33.54■■■□□ 2.96
TREX2-202ENST00000334497 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.96
TREX2-202ENST00000334497 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
TREX2-202ENST00000334497 ABCA5Q8WWZ7 1642 aa33.45■■■□□ 2.95
TREX2-202ENST00000334497 IGF1RP08069 1367 aa33.42■■■□□ 2.94
TREX2-202ENST00000334497 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
TREX2-202ENST00000334497 KIF21BO75037 1637 aa33.39■■■□□ 2.93
TREX2-202ENST00000334497 ZNF608Q9ULD9 1512 aaPredicted RBP33.38■■■□□ 2.93
TREX2-202ENST00000334497 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.931e-6■■■■□ 21.8
TREX2-202ENST00000334497 PRXQ9BXM0 1461 aa33.34■■■□□ 2.93
TREX2-202ENST00000334497 GOLGA3Q08378 1498 aa33.32■■■□□ 2.92
TREX2-202ENST00000334497 ERICH3Q5RHP9 1530 aa33.29■■■□□ 2.92
TREX2-202ENST00000334497 RAPGEF2Q9Y4G8 1499 aa33.28■■■□□ 2.92
TREX2-202ENST00000334497 EIF4G3O43432 1585 aaKnown RBP33.27■■■□□ 2.92
TREX2-202ENST00000334497 PBRM1Q86U86 1689 aa33.26■■■□□ 2.91
TREX2-202ENST00000334497 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
TREX2-202ENST00000334497 CUL7Q14999 1698 aa33.22■■■□□ 2.91
TREX2-202ENST00000334497 GRIN2BQ13224 1484 aa33.21■■■□□ 2.91
TREX2-202ENST00000334497 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
TREX2-202ENST00000334497 TNIKQ9UKE5 1360 aa33.12■■■□□ 2.89
TREX2-202ENST00000334497 ADAMTS12P58397 1594 aa33.05■■■□□ 2.88
TREX2-202ENST00000334497 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
TREX2-202ENST00000334497 FHAD1B1AJZ9 1412 aa33.03■■■□□ 2.88
TREX2-202ENST00000334497 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
TREX2-202ENST00000334497 CEP162Q5TB80 1403 aa32.92■■■□□ 2.86
TREX2-202ENST00000334497 SYNJ2O15056 1496 aa32.86■■■□□ 2.85
TREX2-202ENST00000334497 RANGAP1P46060 587 aaPredicted RBP32.81■■■□□ 2.84
TREX2-202ENST00000334497 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
TREX2-202ENST00000334497 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
TREX2-202ENST00000334497 CTTNBP2Q8WZ74 1663 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms