RNA–Protein interactions for RNA: ENST00000308831.6

RHOD-201, Transcript of ras homolog family member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOD, Length 1,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOD-201ENST00000308831 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
RHOD-201ENST00000308831 CCDC180Q9P1Z9 1646 aa46.05■■■■■ 4.96
RHOD-201ENST00000308831 ABCC9O60706 1549 aa45.48■■■■■ 4.87
RHOD-201ENST00000308831 RB1CC1Q8TDY2 1594 aa43.58■■■■■ 4.57
RHOD-201ENST00000308831 NACADO15069 1562 aa43.45■■■■■ 4.55
RHOD-201ENST00000308831 DCAF8L2P0C7V8 631 aa43.31■■■■■ 4.52
RHOD-201ENST00000308831 MYO15BQ96JP2 1530 aa43.09■■■■■ 4.49
RHOD-201ENST00000308831 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
RHOD-201ENST00000308831 DCAF1Q9Y4B6 1507 aa42.73■■■■■ 4.43
RHOD-201ENST00000308831 UNC13AQ9UPW8 1703 aa42.49■■■■■ 4.39
RHOD-201ENST00000308831 PABPN1Q86U42 306 aaKnown RBP eCLIP42.46■■■■■ 4.39
RHOD-201ENST00000308831 BICRAQ9NZM4 1560 aa42.27■■■■■ 4.36
RHOD-201ENST00000308831 DNAJC5BQ9UF47 199 aa42.2■■■■■ 4.35
RHOD-201ENST00000308831 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
RHOD-201ENST00000308831 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
RHOD-201ENST00000308831 EIF4G1Q04637 1599 aaKnown RBP41.19■■■■■ 4.18
RHOD-201ENST00000308831 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
RHOD-201ENST00000308831 CECR2Q9BXF3 1484 aa40.95■■■■■ 4.15
RHOD-201ENST00000308831 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
RHOD-201ENST00000308831 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
RHOD-201ENST00000308831 ATAD2BQ9ULI0 1458 aa40.06■■■■■ 4
RHOD-201ENST00000308831 BAZ1AQ9NRL2 1556 aaPredicted RBP40.04■■■■■ 4
RHOD-201ENST00000308831 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
RHOD-201ENST00000308831 HMGXB3Q12766 1538 aa39.85■■■■□ 3.97
RHOD-201ENST00000308831 PEG3Q9GZU2 1588 aa39.77■■■■□ 3.96
RHOD-201ENST00000308831 MROH2BQ7Z745 1585 aa39.76■■■■□ 3.96
RHOD-201ENST00000308831 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
RHOD-201ENST00000308831 WIZO95785 1651 aa39.28■■■■□ 3.88
RHOD-201ENST00000308831 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
RHOD-201ENST00000308831 NESP48681 1621 aa39.23■■■■□ 3.87
RHOD-201ENST00000308831 RSF1Q96T23 1441 aaPredicted RBP39.19■■■■□ 3.86
RHOD-201ENST00000308831 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
RHOD-201ENST00000308831 CUX2O14529 1486 aa39.02■■■■□ 3.84
RHOD-201ENST00000308831 CADPSQ9ULU8 1353 aa38.93■■■■□ 3.82
RHOD-201ENST00000308831 PDS5BQ9NTI5 1447 aa38.88■■■■□ 3.81
RHOD-201ENST00000308831 TOP2AP11388 1531 aaKnown RBP38.87■■■■□ 3.81
RHOD-201ENST00000308831 THOC2Q8NI27 1593 aaKnown RBP38.71■■■■□ 3.79
RHOD-201ENST00000308831 KIF21AQ7Z4S6 1674 aa38.7■■■■□ 3.79
RHOD-201ENST00000308831 CFTRP13569 1480 aa38.6■■■■□ 3.77
RHOD-201ENST00000308831 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
RHOD-201ENST00000308831 FANCD2Q9BXW9 1451 aa38.45■■■■□ 3.75
RHOD-201ENST00000308831 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
RHOD-201ENST00000308831 CEP164Q9UPV0 1460 aa38.43■■■■□ 3.74
RHOD-201ENST00000308831 DNAJC5Q9H3Z4 198 aa38.37■■■■□ 3.73
RHOD-201ENST00000308831 WDR62O43379 1518 aa38.36■■■■□ 3.73
RHOD-201ENST00000308831 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
RHOD-201ENST00000308831 URB2Q14146 1524 aaKnown RBP38.08■■■■□ 3.69
RHOD-201ENST00000308831 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
RHOD-201ENST00000308831 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
RHOD-201ENST00000308831 TOPBP1Q92547 1522 aa37.78■■■■□ 3.64
RHOD-201ENST00000308831 DNMBPQ6XZF7 1577 aa37.68■■■■□ 3.62
RHOD-201ENST00000308831 IFT140Q96RY7 1462 aa37.67■■■■□ 3.62
RHOD-201ENST00000308831 ZNF608Q9ULD9 1512 aaPredicted RBP37.51■■■■□ 3.59
RHOD-201ENST00000308831 POLA1P09884 1462 aaPredicted RBP37.44■■■■□ 3.58
RHOD-201ENST00000308831 TARBP1Q13395 1621 aaKnown RBP37.39■■■■□ 3.58
RHOD-201ENST00000308831 OSCARQ8IYS5 282 aa37.36■■■■□ 3.57
RHOD-201ENST00000308831 CUX1P39880 1505 aa37.32■■■■□ 3.57
RHOD-201ENST00000308831 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
RHOD-201ENST00000308831 SOGA1O94964 1423 aa37.3■■■■□ 3.56
RHOD-201ENST00000308831 FGD5Q6ZNL6 1462 aa37.27■■■■□ 3.56
RHOD-201ENST00000308831 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.56
RHOD-201ENST00000308831 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.56
RHOD-201ENST00000308831 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
RHOD-201ENST00000308831 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
RHOD-201ENST00000308831 WRNQ14191 1432 aaPredicted RBP eCLIP36.95■■■■□ 3.51
RHOD-201ENST00000308831 ABCA10Q8WWZ4 1543 aa36.91■■■■□ 3.5
RHOD-201ENST00000308831 GRIN2BQ13224 1484 aa36.91■■■■□ 3.5
RHOD-201ENST00000308831 FBLN2P98095 1184 aa36.9■■■■□ 3.5
RHOD-201ENST00000308831 TOP2BQ02880 1626 aa36.89■■■■□ 3.5
RHOD-201ENST00000308831 SNAPC4Q5SXM2 1469 aa36.88■■■■□ 3.5
RHOD-201ENST00000308831 CHD1O14646 1710 aa36.88■■■■□ 3.49
RHOD-201ENST00000308831 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
RHOD-201ENST00000308831 TRIM41Q8WV44 630 aa36.85■■■■□ 3.49
RHOD-201ENST00000308831 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
RHOD-201ENST00000308831 GAPVD1Q14C86 1478 aa36.84■■■■□ 3.49
RHOD-201ENST00000308831 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
RHOD-201ENST00000308831 ABCA5Q8WWZ7 1642 aa36.77■■■■□ 3.48
RHOD-201ENST00000308831 CHMP7Q8WUX9 453 aaPredicted RBP36.76■■■■□ 3.48
RHOD-201ENST00000308831 RIMBP3CA6NJZ7 1639 aa36.72■■■■□ 3.47
RHOD-201ENST00000308831 RIMBP3BA6NNM3 1639 aa36.72■■■■□ 3.47
RHOD-201ENST00000308831 RIMBP3Q9UFD9 1639 aa36.72■■■■□ 3.47
RHOD-201ENST00000308831 SYNJ2O15056 1496 aa36.71■■■■□ 3.47
RHOD-201ENST00000308831 PBRM1Q86U86 1689 aa36.7■■■■□ 3.47
RHOD-201ENST00000308831 ARHGEF11O15085 1522 aa36.69■■■■□ 3.46
RHOD-201ENST00000308831 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
RHOD-201ENST00000308831 ERICH3Q5RHP9 1530 aa36.46■■■■□ 3.43
RHOD-201ENST00000308831 ADAMTS12P58397 1594 aa36.44■■■■□ 3.42
RHOD-201ENST00000308831 CYB5RLQ6IPT4 315 aa36.42■■■■□ 3.42
RHOD-201ENST00000308831 GRIN2AQ12879 1464 aa36.42■■■■□ 3.42
RHOD-201ENST00000308831 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
RHOD-201ENST00000308831 ARAP1Q96P48 1450 aa36.37■■■■□ 3.41
RHOD-201ENST00000308831 NUP160Q12769 1436 aa36.29■■■■□ 3.4
RHOD-201ENST00000308831 KIF27Q86VH2 1401 aa36.23■■■■□ 3.39
RHOD-201ENST00000308831 CEP170Q5SW79 1584 aa36.23■■■■□ 3.39
RHOD-201ENST00000308831 IGF1RP08069 1367 aa36.15■■■■□ 3.38
RHOD-201ENST00000308831 SHROOM2Q13796 1616 aa36.03■■■■□ 3.36
RHOD-201ENST00000308831 CUL7Q14999 1698 aa36■■■■□ 3.35
RHOD-201ENST00000308831 ERCC6L2Q5T890 1561 aa35.98■■■■□ 3.35
RHOD-201ENST00000308831 JPH4Q96JJ6 628 aa35.95■■■■□ 3.35
RHOD-201ENST00000308831 CARMIL1Q5VZK9 1371 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms