RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 NISCHQ9Y2I1 1504 aa48.3■■■■■ 5.32
CLDND1-201ENST00000341181 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
CLDND1-201ENST00000341181 ABCC9O60706 1549 aa40.76■■■■■ 4.12
CLDND1-201ENST00000341181 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
CLDND1-201ENST00000341181 DCAF8L2P0C7V8 631 aa40.06■■■■■ 4
CLDND1-201ENST00000341181 DCAF1Q9Y4B6 1507 aa39.89■■■■□ 3.98
CLDND1-201ENST00000341181 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
CLDND1-201ENST00000341181 NACADO15069 1562 aa39.63■■■■□ 3.93
CLDND1-201ENST00000341181 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
CLDND1-201ENST00000341181 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
CLDND1-201ENST00000341181 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
CLDND1-201ENST00000341181 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
CLDND1-201ENST00000341181 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
CLDND1-201ENST00000341181 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
CLDND1-201ENST00000341181 CECR2Q9BXF3 1484 aa37.63■■■■□ 3.61
CLDND1-201ENST00000341181 BAZ1AQ9NRL2 1556 aaPredicted RBP37.33■■■■□ 3.57
CLDND1-201ENST00000341181 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.57
CLDND1-201ENST00000341181 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
CLDND1-201ENST00000341181 EIF4G1Q04637 1599 aaKnown RBP37.24■■■■□ 3.55
CLDND1-201ENST00000341181 RSF1Q96T23 1441 aaPredicted RBP37.21■■■■□ 3.55
CLDND1-201ENST00000341181 SUPT5HO00267 1087 aaKnown RBP37.1■■■■□ 3.53
CLDND1-201ENST00000341181 WIZO95785 1651 aa36.99■■■■□ 3.51
CLDND1-201ENST00000341181 CC2D2AQ9P2K1 1620 aa36.86■■■■□ 3.49
CLDND1-201ENST00000341181 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
CLDND1-201ENST00000341181 ATAD2BQ9ULI0 1458 aa36.83■■■■□ 3.49
CLDND1-201ENST00000341181 SMARCA2P51531 1590 aa36.75■■■■□ 3.47
CLDND1-201ENST00000341181 NCAPD3P42695 1498 aa36.59■■■■□ 3.45
CLDND1-201ENST00000341181 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
CLDND1-201ENST00000341181 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.45
CLDND1-201ENST00000341181 TOP2AP11388 1531 aaKnown RBP36.55■■■■□ 3.44
CLDND1-201ENST00000341181 HMGXB3Q12766 1538 aa36.51■■■■□ 3.44
CLDND1-201ENST00000341181 CCDC88BA6NC98 1476 aa36.16■■■■□ 3.38
CLDND1-201ENST00000341181 CFTRP13569 1480 aa35.62■■■■□ 3.29
CLDND1-201ENST00000341181 NESP48681 1621 aa35.6■■■■□ 3.29
CLDND1-201ENST00000341181 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
CLDND1-201ENST00000341181 LAMC3Q9Y6N6 1575 aa35.46■■■■□ 3.27
CLDND1-201ENST00000341181 PRDM2Q13029 1718 aa35.39■■■■□ 3.26
CLDND1-201ENST00000341181 ABCC8Q09428 1581 aa35.25■■■■□ 3.23
CLDND1-201ENST00000341181 FANCD2Q9BXW9 1451 aa35.24■■■■□ 3.23
CLDND1-201ENST00000341181 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
CLDND1-201ENST00000341181 KIF21AQ7Z4S6 1674 aa35.16■■■■□ 3.22
CLDND1-201ENST00000341181 CHIC1Q5VXU3 224 aa35.14■■■■□ 3.22
CLDND1-201ENST00000341181 CEP164Q9UPV0 1460 aa35.08■■■■□ 3.21
CLDND1-201ENST00000341181 WRNQ14191 1432 aaPredicted RBP eCLIP35.03■■■■□ 3.2
CLDND1-201ENST00000341181 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
CLDND1-201ENST00000341181 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
CLDND1-201ENST00000341181 CUX1P39880 1505 aa34.94■■■■□ 3.18
CLDND1-201ENST00000341181 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
CLDND1-201ENST00000341181 URB2Q14146 1524 aaKnown RBP34.88■■■■□ 3.17
CLDND1-201ENST00000341181 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
CLDND1-201ENST00000341181 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
CLDND1-201ENST00000341181 MRC2Q9UBG0 1479 aa34.81■■■■□ 3.16
CLDND1-201ENST00000341181 DNMBPQ6XZF7 1577 aa34.8■■■■□ 3.16
CLDND1-201ENST00000341181 TOPBP1Q92547 1522 aa34.8■■■■□ 3.16
CLDND1-201ENST00000341181 THOC2Q8NI27 1593 aaKnown RBP34.77■■■■□ 3.16
CLDND1-201ENST00000341181 WDR62O43379 1518 aa34.68■■■■□ 3.14
CLDND1-201ENST00000341181 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
CLDND1-201ENST00000341181 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
CLDND1-201ENST00000341181 RAD54L2Q9Y4B4 1467 aa34.48■■■■□ 3.11
CLDND1-201ENST00000341181 CUX2O14529 1486 aa34.44■■■■□ 3.1
CLDND1-201ENST00000341181 SOGA1O94964 1423 aa34.42■■■■□ 3.1
CLDND1-201ENST00000341181 RUSC2Q8N2Y8 1516 aa34.35■■■■□ 3.09
CLDND1-201ENST00000341181 TARBP1Q13395 1621 aaKnown RBP34.35■■■■□ 3.09
CLDND1-201ENST00000341181 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
CLDND1-201ENST00000341181 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
CLDND1-201ENST00000341181 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
CLDND1-201ENST00000341181 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
CLDND1-201ENST00000341181 ZNF608Q9ULD9 1512 aaPredicted RBP34.19■■■■□ 3.06
CLDND1-201ENST00000341181 TDRD9Q8NDG6 1382 aaKnown RBP34.18■■■■□ 3.06
CLDND1-201ENST00000341181 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
CLDND1-201ENST00000341181 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
CLDND1-201ENST00000341181 EEA1Q15075 1411 aa34.09■■■■□ 3.05
CLDND1-201ENST00000341181 AQRO60306 1485 aaKnown RBP eCLIP34.09■■■■□ 3.051e-6■■■■□ 26.1
CLDND1-201ENST00000341181 EIF4G3O43432 1585 aaKnown RBP34.05■■■■□ 3.04
CLDND1-201ENST00000341181 GAPVD1Q14C86 1478 aa34.04■■■■□ 3.04
CLDND1-201ENST00000341181 CSRNP3Q8WYN3 585 aa33.99■■■■□ 3.03
CLDND1-201ENST00000341181 IGF1RP08069 1367 aa33.96■■■■□ 3.03
CLDND1-201ENST00000341181 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
CLDND1-201ENST00000341181 ERICH3Q5RHP9 1530 aa33.88■■■■□ 3.01
CLDND1-201ENST00000341181 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
CLDND1-201ENST00000341181 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
CLDND1-201ENST00000341181 PRXQ9BXM0 1461 aa33.82■■■■□ 3
CLDND1-201ENST00000341181 LOC105371045A0A1W2PR82 267 aa33.8■■■■□ 3
CLDND1-201ENST00000341181 SNAPC4Q5SXM2 1469 aa33.77■■■■□ 3
CLDND1-201ENST00000341181 CARMIL1Q5VZK9 1371 aa33.76■■■■□ 3
CLDND1-201ENST00000341181 KIF21BO75037 1637 aa33.76■■■□□ 2.99
CLDND1-201ENST00000341181 CUL7Q14999 1698 aa33.76■■■□□ 2.99
CLDND1-201ENST00000341181 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
CLDND1-201ENST00000341181 ADAMTS12P58397 1594 aa33.73■■■□□ 2.99
CLDND1-201ENST00000341181 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
CLDND1-201ENST00000341181 GOLGA3Q08378 1498 aa33.65■■■□□ 2.98
CLDND1-201ENST00000341181 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
CLDND1-201ENST00000341181 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
CLDND1-201ENST00000341181 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
CLDND1-201ENST00000341181 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
CLDND1-201ENST00000341181 FBLN2P98095 1184 aa33.47■■■□□ 2.95
CLDND1-201ENST00000341181 CHMP7Q8WUX9 453 aaPredicted RBP33.45■■■□□ 2.95
CLDND1-201ENST00000341181 CHD1O14646 1710 aa33.42■■■□□ 2.94
CLDND1-201ENST00000341181 TNIKQ9UKE5 1360 aa33.39■■■□□ 2.94
CLDND1-201ENST00000341181 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms