Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAB42Q8N4Z0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RAB42Q8N4Z0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.56■■□□□ 1.68
RAB42Q8N4Z0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.56■■□□□ 1.68
RAB42Q8N4Z0 AC010864.1-201ENST00000609407 1511 ntBASIC25.56■■□□□ 1.68
RAB42Q8N4Z0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
RAB42Q8N4Z0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.55■■□□□ 1.68
RAB42Q8N4Z0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
RAB42Q8N4Z0 RPS2P35-201ENST00000443417 897 ntBASIC25.54■■□□□ 1.68
RAB42Q8N4Z0 AC108673.1-201ENST00000510422 1159 ntBASIC25.54■■□□□ 1.68
RAB42Q8N4Z0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RAB42Q8N4Z0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RAB42Q8N4Z0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RAB42Q8N4Z0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RAB42Q8N4Z0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.53■■□□□ 1.68
RAB42Q8N4Z0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RAB42Q8N4Z0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RAB42Q8N4Z0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.51■■□□□ 1.67
RAB42Q8N4Z0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RAB42Q8N4Z0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RAB42Q8N4Z0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
RAB42Q8N4Z0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RAB42Q8N4Z0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RAB42Q8N4Z0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RAB42Q8N4Z0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.48■■□□□ 1.67
RAB42Q8N4Z0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RAB42Q8N4Z0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RAB42Q8N4Z0 ST7-AS1-201ENST00000456775 1889 ntBASIC25.46■■□□□ 1.67
RAB42Q8N4Z0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RAB42Q8N4Z0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RAB42Q8N4Z0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RAB42Q8N4Z0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RAB42Q8N4Z0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RAB42Q8N4Z0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.43■■□□□ 1.66
RAB42Q8N4Z0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
RAB42Q8N4Z0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAB42Q8N4Z0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
RAB42Q8N4Z0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RAB42Q8N4Z0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.41■■□□□ 1.66
RAB42Q8N4Z0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.4■■□□□ 1.66
RAB42Q8N4Z0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAB42Q8N4Z0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.4■■□□□ 1.66
RAB42Q8N4Z0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAB42Q8N4Z0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
RAB42Q8N4Z0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAB42Q8N4Z0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAB42Q8N4Z0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.39■■□□□ 1.66
RAB42Q8N4Z0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.39■■□□□ 1.65
RAB42Q8N4Z0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RAB42Q8N4Z0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAB42Q8N4Z0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAB42Q8N4Z0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RAB42Q8N4Z0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RAB42Q8N4Z0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RAB42Q8N4Z0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RAB42Q8N4Z0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RAB42Q8N4Z0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RAB42Q8N4Z0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RAB42Q8N4Z0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RAB42Q8N4Z0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RAB42Q8N4Z0 MIR6090-201ENST00000622481 60 ntBASIC25.36■■□□□ 1.65
RAB42Q8N4Z0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAB42Q8N4Z0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAB42Q8N4Z0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAB42Q8N4Z0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.33■■□□□ 1.65
RAB42Q8N4Z0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAB42Q8N4Z0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAB42Q8N4Z0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.3■■□□□ 1.64
RAB42Q8N4Z0 ABCB10P1-201ENST00000614297 2181 ntBASIC25.3■■□□□ 1.64
RAB42Q8N4Z0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.3■■□□□ 1.64
RAB42Q8N4Z0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RAB42Q8N4Z0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAB42Q8N4Z0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.29■■□□□ 1.64
RAB42Q8N4Z0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAB42Q8N4Z0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAB42Q8N4Z0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
RAB42Q8N4Z0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
RAB42Q8N4Z0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.27■■□□□ 1.64
RAB42Q8N4Z0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAB42Q8N4Z0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAB42Q8N4Z0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RAB42Q8N4Z0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.26■■□□□ 1.63
RAB42Q8N4Z0 DUX4L29-201ENST00000425409 679 ntBASIC25.26■■□□□ 1.63
RAB42Q8N4Z0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAB42Q8N4Z0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
RAB42Q8N4Z0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
RAB42Q8N4Z0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAB42Q8N4Z0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.23■■□□□ 1.63
RAB42Q8N4Z0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RAB42Q8N4Z0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RAB42Q8N4Z0 AC127502.1-201ENST00000399971 1502 ntBASIC25.22■■□□□ 1.63
RAB42Q8N4Z0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms