Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.58■□□□□ 0.89
TRGV3P03979 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV3P03979 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV3P03979 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRGV3P03979 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.57■□□□□ 0.88
TRGV3P03979 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV3P03979 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRGV3P03979 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRGV3P03979 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.56■□□□□ 0.88
TRGV3P03979 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV3P03979 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV3P03979 AC010864.1-201ENST00000609407 1511 ntBASIC20.56■□□□□ 0.88
TRGV3P03979 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.55■□□□□ 0.88
TRGV3P03979 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV3P03979 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRGV3P03979 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV3P03979 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV3P03979 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV3P03979 RPS2P35-201ENST00000443417 897 ntBASIC20.54■□□□□ 0.88
TRGV3P03979 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.54■□□□□ 0.88
TRGV3P03979 AC087741.3-201ENST00000624270 1347 ntBASIC20.53■□□□□ 0.88
TRGV3P03979 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV3P03979 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.53■□□□□ 0.88
TRGV3P03979 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV3P03979 ST7-AS1-201ENST00000456775 1889 ntBASIC20.52■□□□□ 0.88
TRGV3P03979 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TRGV3P03979 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRGV3P03979 AC044849.2-201ENST00000606596 710 ntBASIC20.51■□□□□ 0.87
TRGV3P03979 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV3P03979 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV3P03979 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV3P03979 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV3P03979 ABCB10P1-201ENST00000614297 2181 ntBASIC20.5■□□□□ 0.87
TRGV3P03979 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV3P03979 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRGV3P03979 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV3P03979 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV3P03979 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV3P03979 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV3P03979 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV3P03979 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.48■□□□□ 0.87
TRGV3P03979 AC108673.1-201ENST00000510422 1159 ntBASIC20.48■□□□□ 0.87
TRGV3P03979 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRGV3P03979 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV3P03979 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.47■□□□□ 0.87
TRGV3P03979 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV3P03979 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.46■□□□□ 0.87
TRGV3P03979 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV3P03979 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV3P03979 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV3P03979 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV3P03979 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV3P03979 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRGV3P03979 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV3P03979 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.45■□□□□ 0.86
TRGV3P03979 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.44■□□□□ 0.86
TRGV3P03979 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV3P03979 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV3P03979 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRGV3P03979 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV3P03979 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV3P03979 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.42■□□□□ 0.86
TRGV3P03979 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV3P03979 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.41■□□□□ 0.86
TRGV3P03979 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV3P03979 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV3P03979 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TRGV3P03979 MIR6090-201ENST00000622481 60 ntBASIC20.4■□□□□ 0.86
TRGV3P03979 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRGV3P03979 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRGV3P03979 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRGV3P03979 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRGV3P03979 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.39■□□□□ 0.85
TRGV3P03979 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.38■□□□□ 0.85
TRGV3P03979 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TRGV3P03979 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV3P03979 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV3P03979 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV3P03979 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV3P03979 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV3P03979 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV3P03979 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.37■□□□□ 0.85
TRGV3P03979 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV3P03979 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV3P03979 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.36■□□□□ 0.85
TRGV3P03979 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV3P03979 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.36■□□□□ 0.85
TRGV3P03979 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV3P03979 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRGV3P03979 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.34■□□□□ 0.85
TRGV3P03979 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV3P03979 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.33■□□□□ 0.85
TRGV3P03979 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV3P03979 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV3P03979 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms