Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.082e-9■■□□□ 11.5
PABPN1Q86U42 CCS-201ENST00000310190 942 ntTSL 5 BASIC34.92■■■■□ 3.182e-9■■□□□ 11.5
PABPN1Q86U42 CCS-205ENST00000530384 1196 ntTSL 534■■■■□ 3.032e-9■■□□□ 11.5
PABPN1Q86U42 CCS-206ENST00000530961 1214 ntTSL 529.94■■■□□ 2.382e-9■■□□□ 11.5
PABPN1Q86U42 CCS-209ENST00000534763 777 ntTSL 225.49■■□□□ 1.672e-9■■□□□ 11.5
PABPN1Q86U42 CCS-202ENST00000525435 798 ntTSL 223.84■■□□□ 1.412e-9■■□□□ 11.5
PABPN1Q86U42 PLCG1-209ENST00000483175 1084 ntTSL 227.37■■□□□ 1.972e-7■■□□□ 11.5
PABPN1Q86U42 PLCG1-208ENST00000477870 1051 ntTSL 226.77■■□□□ 1.882e-7■■□□□ 11.5
PABPN1Q86U42 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.441e-6■■□□□ 11.5
PABPN1Q86U42 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.231e-6■■□□□ 11.5
PABPN1Q86U42 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC20.08■□□□□ 0.88e-10■■□□□ 11.5
PABPN1Q86U42 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC43.69■■■■■ 4.584e-8■■□□□ 11.5
PABPN1Q86U42 GPI-208ENST00000588991 2021 ntTSL 234.61■■■■□ 3.134e-8■■□□□ 11.5
PABPN1Q86U42 GPI-204ENST00000586392 1706 ntTSL 227.91■■■□□ 2.064e-8■■□□□ 11.5
PABPN1Q86U42 GPI-205ENST00000586425 1799 ntTSL 5 BASIC26.06■■□□□ 1.764e-8■■□□□ 11.5
PABPN1Q86U42 GPI-202ENST00000415930 4000 ntTSL 2 BASIC13.36□□□□□ -0.274e-8■■□□□ 11.5
PABPN1Q86U42 ATP13A1-213ENST00000497156 715 ntTSL 231.26■■■□□ 2.594e-8■■□□□ 11.5
PABPN1Q86U42 ATP13A1-212ENST00000496082 698 ntTSL 420.75■□□□□ 0.914e-8■■□□□ 11.5
PABPN1Q86U42 DOCK6-205ENST00000586702 1249 ntTSL 240.12■■■■■ 4.015e-7■■□□□ 11.5
PABPN1Q86U42 DOCK6-208ENST00000587734 312 ntTSL 524.45■■□□□ 1.55e-7■■□□□ 11.5
PABPN1Q86U42 ACACA-239ENST00000617548 1063 ntTSL 1 (best)46.34■■■■■ 5.019e-8■■□□□ 11.5
PABPN1Q86U42 ACACA-238ENST00000616352 1626 ntTSL 1 (best)43.17■■■■■ 4.59e-8■■□□□ 11.5
PABPN1Q86U42 UNK-201ENST00000586217 651 ntTSL 342.6■■■■■ 4.419e-8■■□□□ 11.5
PABPN1Q86U42 ACACA-236ENST00000615229 1468 ntTSL 1 (best)41.66■■■■■ 4.269e-8■■□□□ 11.5
PABPN1Q86U42 RECQL5-212ENST00000580707 948 ntTSL 338.13■■■■□ 3.699e-8■■□□□ 11.5
PABPN1Q86U42 RECQL5-216ENST00000582548 709 ntTSL 534.99■■■■□ 3.199e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.869e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC32.81■■■□□ 2.849e-8■■□□□ 11.5
PABPN1Q86U42 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC30.39■■■□□ 2.469e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-206ENST00000471354 1512 ntTSL 529.44■■■□□ 2.39e-8■■□□□ 11.5
PABPN1Q86U42 HYOU1-215ENST00000543287 2464 ntTSL 228.07■■■□□ 2.089e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.99e-8■■□□□ 11.5
PABPN1Q86U42 HYOU1-207ENST00000530473 2023 ntTSL 526.74■■□□□ 1.879e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-202ENST00000434686 684 ntTSL 323.76■■□□□ 1.399e-8■■□□□ 11.5
PABPN1Q86U42 TMEM50B-201ENST00000420455 3062 ntTSL 1 (best)23.52■■□□□ 1.369e-8■■□□□ 11.5
PABPN1Q86U42 ACACA-235ENST00000614789 662 ntTSL 1 (best)23.4■■□□□ 1.349e-8■■□□□ 11.5
PABPN1Q86U42 MYO19-214ENST00000615902 559 ntTSL 323.04■■□□□ 1.289e-8■■□□□ 11.5
PABPN1Q86U42 AP1G2-224ENST00000556741 353 ntTSL 221.62■■□□□ 1.051e-10■■□□□ 11.5
PABPN1Q86U42 ACACA-246ENST00000621960 551 ntTSL 520.04■□□□□ 0.89e-8■■□□□ 11.5
PABPN1Q86U42 RECQL5-205ENST00000443199 3089 ntTSL 1 (best)19.86■□□□□ 0.779e-8■■□□□ 11.5
PABPN1Q86U42 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC19.66■□□□□ 0.749e-8■■□□□ 11.5
PABPN1Q86U42 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC19.64■□□□□ 0.739e-8■■□□□ 11.5
PABPN1Q86U42 GNB1-204ENST00000439272 602 ntTSL 518.61■□□□□ 0.579e-8■■□□□ 11.5
PABPN1Q86U42 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.579e-8■■□□□ 11.5
PABPN1Q86U42 ARHGEF1-215ENST00000598444 425 ntTSL 218.24■□□□□ 0.519e-8■■□□□ 11.5
PABPN1Q86U42 AP1G2-219ENST00000555789 318 ntTSL 317.85■□□□□ 0.451e-10■■□□□ 11.5
PABPN1Q86U42 TMEM50B-209ENST00000484377 695 ntTSL 217.54■□□□□ 0.49e-8■■□□□ 11.5
PABPN1Q86U42 AP1G2-221ENST00000555974 349 ntTSL 316.12■□□□□ 0.171e-10■■□□□ 11.5
PABPN1Q86U42 ACACA-232ENST00000614438 569 ntTSL 2 BASIC14.68□□□□□ -0.069e-8■■□□□ 11.5
PABPN1Q86U42 ACACA-224ENST00000612007 451 ntTSL 56.63□□□□□ -1.359e-8■■□□□ 11.5
PABPN1Q86U42 TMEM50B-207ENST00000470682 364 ntTSL 56.42□□□□□ -1.389e-8■■□□□ 11.5
PABPN1Q86U42 ANPEP-203ENST00000558740 573 ntTSL 230.4■■■□□ 2.463e-6■■□□□ 11.5
PABPN1Q86U42 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC47.03■■■■■ 5.125e-8■■□□□ 11.5
PABPN1Q86U42 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC43.57■■■■■ 4.575e-8■■□□□ 11.5
PABPN1Q86U42 RRP1-205ENST00000483896 805 ntTSL 331.42■■■□□ 2.622e-10■■□□□ 11.5
PABPN1Q86U42 KLF6-203ENST00000461124 764 ntTSL 531.06■■■□□ 2.561e-18■■□□□ 11.5
PABPN1Q86U42 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC30.61■■■□□ 2.495e-8■■□□□ 11.5
PABPN1Q86U42 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC28.87■■■□□ 2.215e-8■■□□□ 11.5
PABPN1Q86U42 KLF6-201ENST00000173785 925 ntTSL 226.02■■□□□ 1.761e-18■■□□□ 11.5
PABPN1Q86U42 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.031e-18■■□□□ 11.5
PABPN1Q86U42 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC17.33■□□□□ 0.361e-18■■□□□ 11.5
PABPN1Q86U42 ASL-202ENST00000362000 928 ntTSL 241.24■■■■■ 4.192e-7■■□□□ 11.5
PABPN1Q86U42 PNPLA6-218ENST00000599947 669 ntTSL 223.47■■□□□ 1.351e-6■■□□□ 11.5
PABPN1Q86U42 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC22.32■■□□□ 1.161e-6■■□□□ 11.5
PABPN1Q86U42 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 11e-6■■□□□ 11.5
PABPN1Q86U42 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.631e-6■■□□□ 11.5
PABPN1Q86U42 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC17.52■□□□□ 0.41e-6■■□□□ 11.5
PABPN1Q86U42 CARD10-206ENST00000467812 1910 ntTSL 236.48■■■■□ 3.437e-7■■□□□ 11.5
PABPN1Q86U42 GRAMD1A-205ENST00000595596 881 ntTSL 239.92■■■■□ 3.982e-6■■□□□ 11.5
PABPN1Q86U42 FANCA-207ENST00000561667 528 ntTSL 424.6■■□□□ 1.534e-7■■□□□ 11.5
PABPN1Q86U42 ILF3-221ENST00000591649 2579 ntTSL 219.43■□□□□ 0.79e-12■■□□□ 11.4
PABPN1Q86U42 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC27.45■■□□□ 1.988e-7■■□□□ 11.4
PABPN1Q86U42 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.778e-7■■□□□ 11.4
PABPN1Q86U42 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC20.32■□□□□ 0.848e-7■■□□□ 11.4
PABPN1Q86U42 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC18.21■□□□□ 0.518e-7■■□□□ 11.4
PABPN1Q86U42 SLC12A4-206ENST00000570802 3761 ntTSL 218.15■□□□□ 0.58e-7■■□□□ 11.4
PABPN1Q86U42 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC18.15■□□□□ 0.58e-7■■□□□ 11.4
PABPN1Q86U42 AKAP1-212ENST00000573326 1580 ntTSL 522.03■■□□□ 1.123e-9■■□□□ 11.4
PABPN1Q86U42 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.583e-9■■□□□ 11.4
PABPN1Q86U42 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.33e-9■■□□□ 11.4
PABPN1Q86U42 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.173e-9■■□□□ 11.4
PABPN1Q86U42 UBE2G2-211ENST00000497630 933 ntTSL 239.86■■■■□ 3.974e-8■■□□□ 11.4
PABPN1Q86U42 UBE2G2-204ENST00000477954 1034 ntTSL 333.36■■■□□ 2.934e-8■■□□□ 11.4
PABPN1Q86U42 INTS3-207ENST00000481797 5741 ntTSL 218.77■□□□□ 0.63e-6■■□□□ 11.4
PABPN1Q86U42 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.563e-6■■□□□ 11.4
PABPN1Q86U42 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.233e-6■■□□□ 11.4
PABPN1Q86U42 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC16.3■□□□□ 0.23e-6■■□□□ 11.4
PABPN1Q86U42 INTS3-209ENST00000503133 1896 ntTSL 213.95□□□□□ -0.183e-6■■□□□ 11.4
PABPN1Q86U42 INTS3-205ENST00000476843 3404 ntTSL 1 (best)11.31□□□□□ -0.63e-6■■□□□ 11.4
PABPN1Q86U42 SHC1-201ENST00000366442 780 ntTSL 348.04■■■■■ 5.284e-7■■□□□ 11.4
PABPN1Q86U42 SHC1-206ENST00000412170 692 ntTSL 548.04■■■■■ 5.284e-7■■□□□ 11.4
PABPN1Q86U42 PLXNB1-211ENST00000470525 835 ntTSL 537.52■■■■□ 3.62e-7■■□□□ 11.4
PABPN1Q86U42 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.344e-8■■□□□ 11.4
PABPN1Q86U42 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC22.77■■□□□ 1.244e-8■■□□□ 11.4
PABPN1Q86U42 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.284e-8■■□□□ 11.4
PABPN1Q86U42 ACSS2-213ENST00000480978 844 ntTSL 243.87■■■■■ 4.611e-6■■□□□ 11.4
PABPN1Q86U42 RABGGTA-206ENST00000558649 768 ntTSL 231.17■■■□□ 2.589e-10■■□□□ 11.4
PABPN1Q86U42 RABGGTA-219ENST00000560871 886 ntTSL 530.95■■■□□ 2.559e-10■■□□□ 11.4
PABPN1Q86U42 RABGGTA-211ENST00000559850 534 ntTSL 329.76■■■□□ 2.359e-10■■□□□ 11.4
PABPN1Q86U42 TBCD-205ENST00000571618 775 ntTSL 322.84■■□□□ 1.253e-6■■□□□ 11.4
Retrieved 100 of 8,254 protein–RNA pairs in 79.1 ms