RNA–Protein interactions for RNA: ENST00000429686.5

ARAP1-207, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARAP1, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-207ENST00000429686 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
ARAP1-207ENST00000429686 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
ARAP1-207ENST00000429686 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
ARAP1-207ENST00000429686 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
ARAP1-207ENST00000429686 ABCC9O60706 1549 aa17.06■□□□□ 0.32
ARAP1-207ENST00000429686 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
ARAP1-207ENST00000429686 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
ARAP1-207ENST00000429686 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
ARAP1-207ENST00000429686 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.29
ARAP1-207ENST00000429686 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
ARAP1-207ENST00000429686 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
ARAP1-207ENST00000429686 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
ARAP1-207ENST00000429686 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.231e-6■■□□□ 11.5
ARAP1-207ENST00000429686 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
ARAP1-207ENST00000429686 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
ARAP1-207ENST00000429686 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
ARAP1-207ENST00000429686 TTBK1Q5TCY1 1321 aaPredicted RBP16.36■□□□□ 0.21
ARAP1-207ENST00000429686 HRCP23327 699 aa16.35■□□□□ 0.21
ARAP1-207ENST00000429686 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
ARAP1-207ENST00000429686 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
ARAP1-207ENST00000429686 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
ARAP1-207ENST00000429686 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
ARAP1-207ENST00000429686 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
ARAP1-207ENST00000429686 NACADO15069 1562 aa15.91■□□□□ 0.14
ARAP1-207ENST00000429686 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
ARAP1-207ENST00000429686 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
ARAP1-207ENST00000429686 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
ARAP1-207ENST00000429686 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
ARAP1-207ENST00000429686 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
ARAP1-207ENST00000429686 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
ARAP1-207ENST00000429686 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
ARAP1-207ENST00000429686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
ARAP1-207ENST00000429686 WIZO95785 1651 aa15.63■□□□□ 0.09
ARAP1-207ENST00000429686 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
ARAP1-207ENST00000429686 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
ARAP1-207ENST00000429686 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
ARAP1-207ENST00000429686 APLP2Q06481 763 aa15.55■□□□□ 0.08
ARAP1-207ENST00000429686 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.08
ARAP1-207ENST00000429686 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
ARAP1-207ENST00000429686 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
ARAP1-207ENST00000429686 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
ARAP1-207ENST00000429686 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
ARAP1-207ENST00000429686 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
ARAP1-207ENST00000429686 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
ARAP1-207ENST00000429686 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
ARAP1-207ENST00000429686 SOGA1O94964 1423 aa15.35■□□□□ 0.05
ARAP1-207ENST00000429686 SMARCA4P51532 1647 aa15.33■□□□□ 0.05
ARAP1-207ENST00000429686 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
ARAP1-207ENST00000429686 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
ARAP1-207ENST00000429686 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
ARAP1-207ENST00000429686 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.043e-14■■■■□ 23.5
ARAP1-207ENST00000429686 ITGAEP38570 1179 aa15.24■□□□□ 0.03
ARAP1-207ENST00000429686 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
ARAP1-207ENST00000429686 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
ARAP1-207ENST00000429686 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.02
ARAP1-207ENST00000429686 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
ARAP1-207ENST00000429686 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
ARAP1-207ENST00000429686 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
ARAP1-207ENST00000429686 MYT1Q01538 1121 aa15.16■□□□□ 0.02
ARAP1-207ENST00000429686 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
ARAP1-207ENST00000429686 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
ARAP1-207ENST00000429686 FBLN2P98095 1184 aa15.13■□□□□ 0.01
ARAP1-207ENST00000429686 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
ARAP1-207ENST00000429686 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
ARAP1-207ENST00000429686 BCANQ96GW7 911 aa15.06■□□□□ 0
ARAP1-207ENST00000429686 GOLGA3Q08378 1498 aa15.05■□□□□ 0
ARAP1-207ENST00000429686 CLIP1P30622 1438 aa15.05■□□□□ -0
ARAP1-207ENST00000429686 EEA1Q15075 1411 aa15.03■□□□□ -0
ARAP1-207ENST00000429686 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
ARAP1-207ENST00000429686 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
ARAP1-207ENST00000429686 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
ARAP1-207ENST00000429686 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
ARAP1-207ENST00000429686 FAM50AQ14320 339 aaKnown RBP14.92□□□□□ -0.02
ARAP1-207ENST00000429686 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
ARAP1-207ENST00000429686 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
ARAP1-207ENST00000429686 MIER1Q8N108 512 aa14.9□□□□□ -0.02
ARAP1-207ENST00000429686 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
ARAP1-207ENST00000429686 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
ARAP1-207ENST00000429686 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
ARAP1-207ENST00000429686 CUX2O14529 1486 aa14.83□□□□□ -0.04
ARAP1-207ENST00000429686 KANK4Q5T7N3 995 aaPredicted RBP14.82□□□□□ -0.04
ARAP1-207ENST00000429686 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
ARAP1-207ENST00000429686 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
ARAP1-207ENST00000429686 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
ARAP1-207ENST00000429686 NEFLP07196 543 aa14.77□□□□□ -0.05
ARAP1-207ENST00000429686 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
ARAP1-207ENST00000429686 CARMIL1Q5VZK9 1371 aa14.74□□□□□ -0.05
ARAP1-207ENST00000429686 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
ARAP1-207ENST00000429686 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
ARAP1-207ENST00000429686 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
ARAP1-207ENST00000429686 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
ARAP1-207ENST00000429686 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
ARAP1-207ENST00000429686 CFTRP13569 1480 aa14.67□□□□□ -0.06
ARAP1-207ENST00000429686 CUX1P39880 1505 aa14.66□□□□□ -0.06
ARAP1-207ENST00000429686 NESP48681 1621 aa14.65□□□□□ -0.06
ARAP1-207ENST00000429686 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
ARAP1-207ENST00000429686 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
ARAP1-207ENST00000429686 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
ARAP1-207ENST00000429686 IGF1RP08069 1367 aa14.63□□□□□ -0.07
ARAP1-207ENST00000429686 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms