RNA–Protein interactions for RNA: ENST00000561667.1

FANCA-207, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-207ENST00000561667 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
FANCA-207ENST00000561667 ABCC9O60706 1549 aa26.39■■□□□ 1.82
FANCA-207ENST00000561667 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
FANCA-207ENST00000561667 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
FANCA-207ENST00000561667 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
FANCA-207ENST00000561667 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
FANCA-207ENST00000561667 NACADO15069 1562 aa24.78■■□□□ 1.56
FANCA-207ENST00000561667 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.534e-7■■□□□ 11.5
FANCA-207ENST00000561667 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
FANCA-207ENST00000561667 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
FANCA-207ENST00000561667 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
FANCA-207ENST00000561667 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
FANCA-207ENST00000561667 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
FANCA-207ENST00000561667 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
FANCA-207ENST00000561667 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
FANCA-207ENST00000561667 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
FANCA-207ENST00000561667 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
FANCA-207ENST00000561667 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
FANCA-207ENST00000561667 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
FANCA-207ENST00000561667 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
FANCA-207ENST00000561667 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
FANCA-207ENST00000561667 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
FANCA-207ENST00000561667 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
FANCA-207ENST00000561667 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
FANCA-207ENST00000561667 NESP48681 1621 aa22.7■■□□□ 1.22
FANCA-207ENST00000561667 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
FANCA-207ENST00000561667 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
FANCA-207ENST00000561667 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
FANCA-207ENST00000561667 CUX2O14529 1486 aa22.62■■□□□ 1.21
FANCA-207ENST00000561667 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
FANCA-207ENST00000561667 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
FANCA-207ENST00000561667 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
FANCA-207ENST00000561667 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
FANCA-207ENST00000561667 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
FANCA-207ENST00000561667 WIZO95785 1651 aa22.38■■□□□ 1.17
FANCA-207ENST00000561667 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
FANCA-207ENST00000561667 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
FANCA-207ENST00000561667 MRC2Q9UBG0 1479 aa22.1■■□□□ 1.13
FANCA-207ENST00000561667 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
FANCA-207ENST00000561667 WDR62O43379 1518 aa22.05■■□□□ 1.12
FANCA-207ENST00000561667 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
FANCA-207ENST00000561667 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
FANCA-207ENST00000561667 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
FANCA-207ENST00000561667 CFTRP13569 1480 aa21.95■■□□□ 1.1
FANCA-207ENST00000561667 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
FANCA-207ENST00000561667 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
FANCA-207ENST00000561667 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
FANCA-207ENST00000561667 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
FANCA-207ENST00000561667 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
FANCA-207ENST00000561667 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
FANCA-207ENST00000561667 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
FANCA-207ENST00000561667 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
FANCA-207ENST00000561667 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
FANCA-207ENST00000561667 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
FANCA-207ENST00000561667 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
FANCA-207ENST00000561667 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
FANCA-207ENST00000561667 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
FANCA-207ENST00000561667 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
FANCA-207ENST00000561667 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
FANCA-207ENST00000561667 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.024e-10■■■□□ 18.6
FANCA-207ENST00000561667 CHD1O14646 1710 aa21.38■■□□□ 1.01
FANCA-207ENST00000561667 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
FANCA-207ENST00000561667 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
FANCA-207ENST00000561667 ARHGEF11O15085 1522 aa21.32■■□□□ 1
FANCA-207ENST00000561667 FBLN2P98095 1184 aa21.28■■□□□ 1
FANCA-207ENST00000561667 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
FANCA-207ENST00000561667 SOGA1O94964 1423 aa21.25■□□□□ 0.99
FANCA-207ENST00000561667 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
FANCA-207ENST00000561667 CUX1P39880 1505 aa21.24■□□□□ 0.99
FANCA-207ENST00000561667 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
FANCA-207ENST00000561667 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
FANCA-207ENST00000561667 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
FANCA-207ENST00000561667 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
FANCA-207ENST00000561667 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
FANCA-207ENST00000561667 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
FANCA-207ENST00000561667 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
FANCA-207ENST00000561667 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
FANCA-207ENST00000561667 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
FANCA-207ENST00000561667 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
FANCA-207ENST00000561667 SYNJ1O43426 1573 aa21■□□□□ 0.95
FANCA-207ENST00000561667 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
FANCA-207ENST00000561667 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
FANCA-207ENST00000561667 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
FANCA-207ENST00000561667 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
FANCA-207ENST00000561667 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
FANCA-207ENST00000561667 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
FANCA-207ENST00000561667 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
FANCA-207ENST00000561667 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
FANCA-207ENST00000561667 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
FANCA-207ENST00000561667 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
FANCA-207ENST00000561667 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
FANCA-207ENST00000561667 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
FANCA-207ENST00000561667 NUP160Q12769 1436 aa20.7■□□□□ 0.9
FANCA-207ENST00000561667 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
FANCA-207ENST00000561667 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
FANCA-207ENST00000561667 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
FANCA-207ENST00000561667 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
FANCA-207ENST00000561667 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
FANCA-207ENST00000561667 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
FANCA-207ENST00000561667 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms