RNA–Protein interactions for RNA: ENST00000470682.5

TMEM50B-207, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 364 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-207ENST00000470682 CHIC1Q5VXU3 224 aa8.72□□□□□ -1.01
TMEM50B-207ENST00000470682 AEBP2Q6ZN18 517 aaPredicted RBP8.5□□□□□ -1.05
TMEM50B-207ENST00000470682 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
TMEM50B-207ENST00000470682 PHF23Q9BUL5 403 aaPredicted RBP7.69□□□□□ -1.18
TMEM50B-207ENST00000470682 PLPPR3Q6T4P5 718 aa7.28□□□□□ -1.24
TMEM50B-207ENST00000470682 SENP3Q9H4L4 574 aaPredicted RBP7.2□□□□□ -1.26
TMEM50B-207ENST00000470682 CCDC180Q9P1Z9 1646 aa6.93□□□□□ -1.3
TMEM50B-207ENST00000470682 ABCC9O60706 1549 aa6.87□□□□□ -1.31
TMEM50B-207ENST00000470682 EHMT2Q96KQ7 1210 aa6.78□□□□□ -1.32
TMEM50B-207ENST00000470682 ADRA2BP18089 450 aa6.76□□□□□ -1.33
TMEM50B-207ENST00000470682 KCNA4P22459 653 aa6.74□□□□□ -1.33
TMEM50B-207ENST00000470682 PPP6R1Q9UPN7 881 aa6.64□□□□□ -1.35
TMEM50B-207ENST00000470682 FOXD1Q16676 465 aa6.6□□□□□ -1.35
TMEM50B-207ENST00000470682 DCAF8L2P0C7V8 631 aa6.59□□□□□ -1.35
TMEM50B-207ENST00000470682 RB1CC1Q8TDY2 1594 aa6.53□□□□□ -1.36
TMEM50B-207ENST00000470682 SLC4A1APQ9BWU0 796 aaKnown RBP6.51□□□□□ -1.37
TMEM50B-207ENST00000470682 NACADO15069 1562 aa6.51□□□□□ -1.37
TMEM50B-207ENST00000470682 ZCCHC6Q5VYS8 1495 aaKnown RBP6.5□□□□□ -1.37
TMEM50B-207ENST00000470682 CSRNP3Q8WYN3 585 aa6.49□□□□□ -1.37
TMEM50B-207ENST00000470682 PPP4R3CPQ6ZMV5 832 aa6.44□□□□□ -1.38
TMEM50B-207ENST00000470682 UNC13AQ9UPW8 1703 aa6.43□□□□□ -1.38
TMEM50B-207ENST00000470682 NCBP3Q53F19 620 aaKnown RBP6.43□□□□□ -1.38
TMEM50B-207ENST00000470682 PABPN1Q86U42 306 aaKnown RBP eCLIP6.42□□□□□ -1.389e-8■■□□□ 11.5
TMEM50B-207ENST00000470682 MYO15BQ96JP2 1530 aa6.41□□□□□ -1.38
TMEM50B-207ENST00000470682 DCAF1Q9Y4B6 1507 aa6.4□□□□□ -1.38
TMEM50B-207ENST00000470682 SCRIBQ14160 1630 aa6.39□□□□□ -1.39
TMEM50B-207ENST00000470682 BICRAQ9NZM4 1560 aa6.37□□□□□ -1.39
TMEM50B-207ENST00000470682 PIAS4Q8N2W9 510 aaPredicted RBP6.35□□□□□ -1.39
TMEM50B-207ENST00000470682 DNAJC5BQ9UF47 199 aa6.32□□□□□ -1.4
TMEM50B-207ENST00000470682 NPM3O75607 178 aaKnown RBP6.3□□□□□ -1.4
TMEM50B-207ENST00000470682 SHROOM4Q9ULL8 1493 aa6.24□□□□□ -1.41
TMEM50B-207ENST00000470682 ZBTB22O15209 634 aa6.2□□□□□ -1.42
TMEM50B-207ENST00000470682 EIF4G1Q04637 1599 aaKnown RBP6.19□□□□□ -1.42
TMEM50B-207ENST00000470682 CC2D2AQ9P2K1 1620 aa6.19□□□□□ -1.42
TMEM50B-207ENST00000470682 CNKSR2Q8WXI2 1034 aa6.19□□□□□ -1.42
TMEM50B-207ENST00000470682 SCAF1Q9H7N4 1312 aaKnown RBP6.16□□□□□ -1.42
TMEM50B-207ENST00000470682 CECR2Q9BXF3 1484 aa6.14□□□□□ -1.43
TMEM50B-207ENST00000470682 SLC24A1O60721 1099 aa6.13□□□□□ -1.43
TMEM50B-207ENST00000470682 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
TMEM50B-207ENST00000470682 SMARCA4P51532 1647 aa6.07□□□□□ -1.44
TMEM50B-207ENST00000470682 AMER1Q5JTC6 1135 aaPredicted RBP6.07□□□□□ -1.44
TMEM50B-207ENST00000470682 MROH2BQ7Z745 1585 aa6.05□□□□□ -1.44
TMEM50B-207ENST00000470682 RTN4Q9NQC3 1192 aaKnown RBP6.04□□□□□ -1.44
TMEM50B-207ENST00000470682 BAZ1AQ9NRL2 1556 aaPredicted RBP6.04□□□□□ -1.44
TMEM50B-207ENST00000470682 ATAD2BQ9ULI0 1458 aa6.03□□□□□ -1.44
TMEM50B-207ENST00000470682 NCAPD3P42695 1498 aa6.01□□□□□ -1.45
TMEM50B-207ENST00000470682 SMARCA2P51531 1590 aa6□□□□□ -1.45
TMEM50B-207ENST00000470682 WIZO95785 1651 aa5.99□□□□□ -1.45
TMEM50B-207ENST00000470682 BAZ1BQ9UIG0 1483 aaKnown RBP5.98□□□□□ -1.45
TMEM50B-207ENST00000470682 HMGXB3Q12766 1538 aa5.98□□□□□ -1.45
TMEM50B-207ENST00000470682 MSH5O43196 834 aa5.97□□□□□ -1.45
TMEM50B-207ENST00000470682 RNF216Q9NWF9 866 aaPredicted RBP5.97□□□□□ -1.45
TMEM50B-207ENST00000470682 PEG3Q9GZU2 1588 aa5.97□□□□□ -1.45
TMEM50B-207ENST00000470682 RSF1Q96T23 1441 aaPredicted RBP5.94□□□□□ -1.46
TMEM50B-207ENST00000470682 NESP48681 1621 aa5.94□□□□□ -1.46
TMEM50B-207ENST00000470682 MAPK8IP2Q13387 824 aaPredicted RBP5.92□□□□□ -1.46
TMEM50B-207ENST00000470682 TOP2AP11388 1531 aaKnown RBP5.89□□□□□ -1.47
TMEM50B-207ENST00000470682 ERCC6Q03468 1493 aa5.89□□□□□ -1.47
TMEM50B-207ENST00000470682 ATXN8OSP0DMR3 200 aa5.88□□□□□ -1.47
TMEM50B-207ENST00000470682 KIF21AQ7Z4S6 1674 aa5.86□□□□□ -1.47
TMEM50B-207ENST00000470682 FKBP8Q14318 412 aa5.86□□□□□ -1.47
TMEM50B-207ENST00000470682 LAMC3Q9Y6N6 1575 aa5.85□□□□□ -1.47
TMEM50B-207ENST00000470682 CADPSQ9ULU8 1353 aa5.84□□□□□ -1.47
TMEM50B-207ENST00000470682 SUPT5HO00267 1087 aaKnown RBP5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 MYCNP04198 464 aaPredicted RBP5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 SLC4A2P04920 1241 aa5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 HOXD11P31277 338 aaPredicted RBP5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 THOC2Q8NI27 1593 aaKnown RBP5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 CCDC88BA6NC98 1476 aa5.83□□□□□ -1.48
TMEM50B-207ENST00000470682 PDS5BQ9NTI5 1447 aa5.81□□□□□ -1.48
TMEM50B-207ENST00000470682 CFTRP13569 1480 aa5.8□□□□□ -1.48
TMEM50B-207ENST00000470682 DMRT2Q9Y5R5 561 aa5.8□□□□□ -1.48
TMEM50B-207ENST00000470682 CUX2O14529 1486 aa5.79□□□□□ -1.48
TMEM50B-207ENST00000470682 FANCD2Q9BXW9 1451 aa5.79□□□□□ -1.48
TMEM50B-207ENST00000470682 MRC2Q9UBG0 1479 aa5.78□□□□□ -1.48
TMEM50B-207ENST00000470682 CEP164Q9UPV0 1460 aa5.78□□□□□ -1.48
TMEM50B-207ENST00000470682 PRDM2Q13029 1718 aa5.77□□□□□ -1.49
TMEM50B-207ENST00000470682 WDR62O43379 1518 aa5.76□□□□□ -1.49
TMEM50B-207ENST00000470682 URB2Q14146 1524 aaKnown RBP5.75□□□□□ -1.49
TMEM50B-207ENST00000470682 TOPBP1Q92547 1522 aa5.71□□□□□ -1.5
TMEM50B-207ENST00000470682 DNMBPQ6XZF7 1577 aa5.68□□□□□ -1.5
TMEM50B-207ENST00000470682 ZNF608Q9ULD9 1512 aaPredicted RBP5.68□□□□□ -1.5
TMEM50B-207ENST00000470682 RAD54L2Q9Y4B4 1467 aa5.66□□□□□ -1.5
TMEM50B-207ENST00000470682 CUX1P39880 1505 aa5.66□□□□□ -1.5
TMEM50B-207ENST00000470682 DNAJC5Q9H3Z4 198 aa5.66□□□□□ -1.5
TMEM50B-207ENST00000470682 POLA1P09884 1462 aaPredicted RBP5.65□□□□□ -1.5
TMEM50B-207ENST00000470682 FGD5Q6ZNL6 1462 aa5.65□□□□□ -1.5
TMEM50B-207ENST00000470682 ABCC8Q09428 1581 aa5.65□□□□□ -1.5
TMEM50B-207ENST00000470682 IFT140Q96RY7 1462 aa5.64□□□□□ -1.51
TMEM50B-207ENST00000470682 EIF4G3O43432 1585 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-207ENST00000470682 TARBP1Q13395 1621 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-207ENST00000470682 AQRO60306 1485 aaKnown RBP eCLIP5.64□□□□□ -1.51
TMEM50B-207ENST00000470682 SYNJ1O43426 1573 aa5.63□□□□□ -1.51
TMEM50B-207ENST00000470682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.62□□□□□ -1.51
TMEM50B-207ENST00000470682 HNRNPUL2Q1KMD3 747 aaKnown RBP5.62□□□□□ -1.51
TMEM50B-207ENST00000470682 TDRD9Q8NDG6 1382 aaKnown RBP5.62□□□□□ -1.51
TMEM50B-207ENST00000470682 SOGA1O94964 1423 aa5.62□□□□□ -1.51
TMEM50B-207ENST00000470682 SAMD1Q6SPF0 538 aaPredicted RBP5.61□□□□□ -1.51
TMEM50B-207ENST00000470682 WDR97A6NE52 1622 aa5.6□□□□□ -1.51
TMEM50B-207ENST00000470682 WRNQ14191 1432 aaPredicted RBP eCLIP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms