RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
TMEM50B-201ENST00000420455 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
TMEM50B-201ENST00000420455 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
TMEM50B-201ENST00000420455 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
TMEM50B-201ENST00000420455 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
TMEM50B-201ENST00000420455 ABCC9O60706 1549 aa25.02■■□□□ 1.6
TMEM50B-201ENST00000420455 NACADO15069 1562 aa24.88■■□□□ 1.57
TMEM50B-201ENST00000420455 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
TMEM50B-201ENST00000420455 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
TMEM50B-201ENST00000420455 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
TMEM50B-201ENST00000420455 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
TMEM50B-201ENST00000420455 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
TMEM50B-201ENST00000420455 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
TMEM50B-201ENST00000420455 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
TMEM50B-201ENST00000420455 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
TMEM50B-201ENST00000420455 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
TMEM50B-201ENST00000420455 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
TMEM50B-201ENST00000420455 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
TMEM50B-201ENST00000420455 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
TMEM50B-201ENST00000420455 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.369e-8■■□□□ 11.5
TMEM50B-201ENST00000420455 WIZO95785 1651 aa23.43■■□□□ 1.34
TMEM50B-201ENST00000420455 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
TMEM50B-201ENST00000420455 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
TMEM50B-201ENST00000420455 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
TMEM50B-201ENST00000420455 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
TMEM50B-201ENST00000420455 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
TMEM50B-201ENST00000420455 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
TMEM50B-201ENST00000420455 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
TMEM50B-201ENST00000420455 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
TMEM50B-201ENST00000420455 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
TMEM50B-201ENST00000420455 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
TMEM50B-201ENST00000420455 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
TMEM50B-201ENST00000420455 CFTRP13569 1480 aa22.44■■□□□ 1.18
TMEM50B-201ENST00000420455 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
TMEM50B-201ENST00000420455 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
TMEM50B-201ENST00000420455 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
TMEM50B-201ENST00000420455 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
TMEM50B-201ENST00000420455 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
TMEM50B-201ENST00000420455 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
TMEM50B-201ENST00000420455 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
TMEM50B-201ENST00000420455 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
TMEM50B-201ENST00000420455 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
TMEM50B-201ENST00000420455 CUX1P39880 1505 aa22.1■■□□□ 1.13
TMEM50B-201ENST00000420455 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
TMEM50B-201ENST00000420455 EEA1Q15075 1411 aa22.05■■□□□ 1.12
TMEM50B-201ENST00000420455 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
TMEM50B-201ENST00000420455 NESP48681 1621 aa22.03■■□□□ 1.12
TMEM50B-201ENST00000420455 SOGA1O94964 1423 aa22■■□□□ 1.11
TMEM50B-201ENST00000420455 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
TMEM50B-201ENST00000420455 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
TMEM50B-201ENST00000420455 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
TMEM50B-201ENST00000420455 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
TMEM50B-201ENST00000420455 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
TMEM50B-201ENST00000420455 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
TMEM50B-201ENST00000420455 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
TMEM50B-201ENST00000420455 TOPBP1Q92547 1522 aa21.83■■□□□ 1.08
TMEM50B-201ENST00000420455 KIF21BO75037 1637 aa21.81■■□□□ 1.08
TMEM50B-201ENST00000420455 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
TMEM50B-201ENST00000420455 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
TMEM50B-201ENST00000420455 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
TMEM50B-201ENST00000420455 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
TMEM50B-201ENST00000420455 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
TMEM50B-201ENST00000420455 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
TMEM50B-201ENST00000420455 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
TMEM50B-201ENST00000420455 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
TMEM50B-201ENST00000420455 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
TMEM50B-201ENST00000420455 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
TMEM50B-201ENST00000420455 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
TMEM50B-201ENST00000420455 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
TMEM50B-201ENST00000420455 CUX2O14529 1486 aa21.61■■□□□ 1.05
TMEM50B-201ENST00000420455 WDR62O43379 1518 aa21.61■■□□□ 1.05
TMEM50B-201ENST00000420455 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
TMEM50B-201ENST00000420455 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
TMEM50B-201ENST00000420455 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
TMEM50B-201ENST00000420455 IGF1RP08069 1367 aa21.55■■□□□ 1.04
TMEM50B-201ENST00000420455 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
TMEM50B-201ENST00000420455 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
TMEM50B-201ENST00000420455 CEP162Q5TB80 1403 aa21.48■■□□□ 1.03
TMEM50B-201ENST00000420455 CUL7Q14999 1698 aa21.46■■□□□ 1.03
TMEM50B-201ENST00000420455 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
TMEM50B-201ENST00000420455 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
TMEM50B-201ENST00000420455 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
TMEM50B-201ENST00000420455 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
TMEM50B-201ENST00000420455 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
TMEM50B-201ENST00000420455 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
TMEM50B-201ENST00000420455 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
TMEM50B-201ENST00000420455 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
TMEM50B-201ENST00000420455 CLIP1P30622 1438 aa21.29■■□□□ 1
TMEM50B-201ENST00000420455 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
TMEM50B-201ENST00000420455 ZNF608Q9ULD9 1512 aaPredicted RBP21.22■□□□□ 0.99
TMEM50B-201ENST00000420455 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
TMEM50B-201ENST00000420455 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
TMEM50B-201ENST00000420455 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
TMEM50B-201ENST00000420455 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.991e-9■■■□□ 17.5
TMEM50B-201ENST00000420455 PCGF6Q9BYE7 350 aa21.18■□□□□ 0.98
TMEM50B-201ENST00000420455 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
TMEM50B-201ENST00000420455 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
TMEM50B-201ENST00000420455 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
TMEM50B-201ENST00000420455 ARHGAP35Q9NRY4 1499 aa21.15■□□□□ 0.98
TMEM50B-201ENST00000420455 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms