RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
HDAC5-202ENST00000336057 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
HDAC5-202ENST00000336057 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
HDAC5-202ENST00000336057 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
HDAC5-202ENST00000336057 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
HDAC5-202ENST00000336057 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
HDAC5-202ENST00000336057 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
HDAC5-202ENST00000336057 APLP2Q06481 763 aa24.49■■□□□ 1.51
HDAC5-202ENST00000336057 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
HDAC5-202ENST00000336057 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
HDAC5-202ENST00000336057 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
HDAC5-202ENST00000336057 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
HDAC5-202ENST00000336057 CCER1Q8TC90 406 aaPredicted RBP24.07■■□□□ 1.44
HDAC5-202ENST00000336057 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
HDAC5-202ENST00000336057 CENPBP07199 599 aaPredicted RBP23.95■■□□□ 1.43
HDAC5-202ENST00000336057 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
HDAC5-202ENST00000336057 UBTFP17480 764 aaKnown RBP23.9■■□□□ 1.42
HDAC5-202ENST00000336057 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
HDAC5-202ENST00000336057 HRCP23327 699 aa23.9■■□□□ 1.42
HDAC5-202ENST00000336057 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
HDAC5-202ENST00000336057 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
HDAC5-202ENST00000336057 ATP1B4Q9UN42 357 aaPredicted RBP23.53■■□□□ 1.36
HDAC5-202ENST00000336057 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
HDAC5-202ENST00000336057 NEFLP07196 543 aa23.17■■□□□ 1.3
HDAC5-202ENST00000336057 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
HDAC5-202ENST00000336057 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.29
HDAC5-202ENST00000336057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.09■■□□□ 1.29
HDAC5-202ENST00000336057 ITGAEP38570 1179 aa23.05■■□□□ 1.28
HDAC5-202ENST00000336057 MYT1Q01538 1121 aa23.01■■□□□ 1.27
HDAC5-202ENST00000336057 ABCC9O60706 1549 aa22.99■■□□□ 1.27
HDAC5-202ENST00000336057 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
HDAC5-202ENST00000336057 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
HDAC5-202ENST00000336057 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.244e-8■■□□□ 11.4
HDAC5-202ENST00000336057 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
HDAC5-202ENST00000336057 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
HDAC5-202ENST00000336057 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
HDAC5-202ENST00000336057 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
HDAC5-202ENST00000336057 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
HDAC5-202ENST00000336057 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
HDAC5-202ENST00000336057 GTF3C3Q9Y5Q9 886 aa22.5■■□□□ 1.19
HDAC5-202ENST00000336057 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
HDAC5-202ENST00000336057 NEUROD1Q13562 356 aa22.39■■□□□ 1.18
HDAC5-202ENST00000336057 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
HDAC5-202ENST00000336057 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
HDAC5-202ENST00000336057 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
HDAC5-202ENST00000336057 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
HDAC5-202ENST00000336057 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
HDAC5-202ENST00000336057 DAXXQ9UER7 740 aaPredicted RBP22.21■■□□□ 1.15
HDAC5-202ENST00000336057 ANP32CO43423 234 aa22.2■■□□□ 1.15
HDAC5-202ENST00000336057 BCANQ96GW7 911 aa22.14■■□□□ 1.13
HDAC5-202ENST00000336057 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
HDAC5-202ENST00000336057 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
HDAC5-202ENST00000336057 ZNF326Q5BKZ1 582 aaKnown RBP21.97■■□□□ 1.11
HDAC5-202ENST00000336057 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
HDAC5-202ENST00000336057 CDK11AQ9UQ88 783 aaPredicted RBP21.91■■□□□ 1.1
HDAC5-202ENST00000336057 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
HDAC5-202ENST00000336057 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
HDAC5-202ENST00000336057 CLIP1P30622 1438 aa21.84■■□□□ 1.09
HDAC5-202ENST00000336057 ARID3CA6NKF2 412 aa21.83■■□□□ 1.09
HDAC5-202ENST00000336057 FBLN2P98095 1184 aa21.83■■□□□ 1.09
HDAC5-202ENST00000336057 EEA1Q15075 1411 aa21.83■■□□□ 1.08
HDAC5-202ENST00000336057 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
HDAC5-202ENST00000336057 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
HDAC5-202ENST00000336057 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
HDAC5-202ENST00000336057 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
HDAC5-202ENST00000336057 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
HDAC5-202ENST00000336057 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
HDAC5-202ENST00000336057 NACADO15069 1562 aa21.74■■□□□ 1.07
HDAC5-202ENST00000336057 MIER1Q8N108 512 aa21.72■■□□□ 1.07
HDAC5-202ENST00000336057 FKBP8Q14318 412 aa21.7■■□□□ 1.06
HDAC5-202ENST00000336057 ZNF777Q9ULD5 760 aaPredicted RBP21.68■■□□□ 1.06
HDAC5-202ENST00000336057 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
HDAC5-202ENST00000336057 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
HDAC5-202ENST00000336057 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.05
HDAC5-202ENST00000336057 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
HDAC5-202ENST00000336057 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
HDAC5-202ENST00000336057 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
HDAC5-202ENST00000336057 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
HDAC5-202ENST00000336057 MTUS2Q5JR59 1369 aa21.53■■□□□ 1.04
HDAC5-202ENST00000336057 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
HDAC5-202ENST00000336057 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
HDAC5-202ENST00000336057 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
HDAC5-202ENST00000336057 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
HDAC5-202ENST00000336057 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
HDAC5-202ENST00000336057 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
HDAC5-202ENST00000336057 SOGA1O94964 1423 aa21.37■■□□□ 1.01
HDAC5-202ENST00000336057 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
HDAC5-202ENST00000336057 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
HDAC5-202ENST00000336057 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
HDAC5-202ENST00000336057 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
HDAC5-202ENST00000336057 TMC1Q8TDI8 760 aa21.32■■□□□ 1
HDAC5-202ENST00000336057 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
HDAC5-202ENST00000336057 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
HDAC5-202ENST00000336057 TSPY4P0CV99 314 aa21.27■■□□□ 1
HDAC5-202ENST00000336057 TSPY10P0CW01 314 aa21.27■■□□□ 1
HDAC5-202ENST00000336057 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
HDAC5-202ENST00000336057 NEFMP07197 916 aa21.25■□□□□ 0.99
HDAC5-202ENST00000336057 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
HDAC5-202ENST00000336057 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
HDAC5-202ENST00000336057 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms