RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 NISCHQ9Y2I1 1504 aa51.94■■■■■ 5.91
ACACA-236ENST00000615229 CCDC180Q9P1Z9 1646 aa46.07■■■■■ 4.96
ACACA-236ENST00000615229 ABCC9O60706 1549 aa44.56■■■■■ 4.72
ACACA-236ENST00000615229 ZCCHC6Q5VYS8 1495 aaKnown RBP43.4■■■■■ 4.54
ACACA-236ENST00000615229 NACADO15069 1562 aa43.09■■■■■ 4.49
ACACA-236ENST00000615229 DCAF8L2P0C7V8 631 aa43.09■■■■■ 4.49
ACACA-236ENST00000615229 RB1CC1Q8TDY2 1594 aa43.05■■■■■ 4.48
ACACA-236ENST00000615229 DCAF1Q9Y4B6 1507 aa42.96■■■■■ 4.47
ACACA-236ENST00000615229 MYO15BQ96JP2 1530 aa42.94■■■■■ 4.46
ACACA-236ENST00000615229 UNC13AQ9UPW8 1703 aa42.36■■■■■ 4.37
ACACA-236ENST00000615229 SCRIBQ14160 1630 aa42.1■■■■■ 4.33
ACACA-236ENST00000615229 BICRAQ9NZM4 1560 aa41.83■■■■■ 4.29
ACACA-236ENST00000615229 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.269e-8■■□□□ 11.5
ACACA-236ENST00000615229 SHROOM4Q9ULL8 1493 aa41.34■■■■■ 4.21
ACACA-236ENST00000615229 EIF4G1Q04637 1599 aaKnown RBP40.64■■■■■ 4.1
ACACA-236ENST00000615229 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
ACACA-236ENST00000615229 DNAJC5BQ9UF47 199 aa40.44■■■■■ 4.06
ACACA-236ENST00000615229 CC2D2AQ9P2K1 1620 aa40.38■■■■■ 4.05
ACACA-236ENST00000615229 SMARCA4P51532 1647 aa40.29■■■■■ 4.04
ACACA-236ENST00000615229 BAZ1AQ9NRL2 1556 aaPredicted RBP40.22■■■■■ 4.03
ACACA-236ENST00000615229 MROH2BQ7Z745 1585 aa40.09■■■■■ 4.01
ACACA-236ENST00000615229 ATAD2BQ9ULI0 1458 aa39.85■■■■□ 3.97
ACACA-236ENST00000615229 PEG3Q9GZU2 1588 aa39.83■■■■□ 3.97
ACACA-236ENST00000615229 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
ACACA-236ENST00000615229 WIZO95785 1651 aa39.76■■■■□ 3.96
ACACA-236ENST00000615229 RSF1Q96T23 1441 aaPredicted RBP39.72■■■■□ 3.95
ACACA-236ENST00000615229 NCAPD3P42695 1498 aa39.71■■■■□ 3.95
ACACA-236ENST00000615229 HMGXB3Q12766 1538 aa39.63■■■■□ 3.94
ACACA-236ENST00000615229 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
ACACA-236ENST00000615229 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
ACACA-236ENST00000615229 SUPT5HO00267 1087 aaKnown RBP39.03■■■■□ 3.84
ACACA-236ENST00000615229 CCDC88BA6NC98 1476 aa38.77■■■■□ 3.8
ACACA-236ENST00000615229 NESP48681 1621 aa38.75■■■■□ 3.79
ACACA-236ENST00000615229 LAMC3Q9Y6N6 1575 aa38.66■■■■□ 3.78
ACACA-236ENST00000615229 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
ACACA-236ENST00000615229 PRDM2Q13029 1718 aa38.48■■■■□ 3.75
ACACA-236ENST00000615229 CFTRP13569 1480 aa38.47■■■■□ 3.75
ACACA-236ENST00000615229 KIF21AQ7Z4S6 1674 aa38.42■■■■□ 3.74
ACACA-236ENST00000615229 ERCC6Q03468 1493 aa38.32■■■■□ 3.72
ACACA-236ENST00000615229 PDS5BQ9NTI5 1447 aa38.28■■■■□ 3.72
ACACA-236ENST00000615229 FANCD2Q9BXW9 1451 aa38.18■■■■□ 3.7
ACACA-236ENST00000615229 THOC2Q8NI27 1593 aaKnown RBP38.12■■■■□ 3.69
ACACA-236ENST00000615229 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
ACACA-236ENST00000615229 MRC2Q9UBG0 1479 aa37.94■■■■□ 3.66
ACACA-236ENST00000615229 WDR62O43379 1518 aa37.85■■■■□ 3.65
ACACA-236ENST00000615229 URB2Q14146 1524 aaKnown RBP37.83■■■■□ 3.65
ACACA-236ENST00000615229 CUX2O14529 1486 aa37.73■■■■□ 3.63
ACACA-236ENST00000615229 DNMBPQ6XZF7 1577 aa37.68■■■■□ 3.62
ACACA-236ENST00000615229 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
ACACA-236ENST00000615229 ABCC8Q09428 1581 aa37.61■■■■□ 3.61
ACACA-236ENST00000615229 CUX1P39880 1505 aa37.59■■■■□ 3.61
ACACA-236ENST00000615229 SYNJ1O43426 1573 aa37.45■■■■□ 3.59
ACACA-236ENST00000615229 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
ACACA-236ENST00000615229 WRNQ14191 1432 aaPredicted RBP eCLIP37.43■■■■□ 3.58
ACACA-236ENST00000615229 TOP2BQ02880 1626 aa37.38■■■■□ 3.58
ACACA-236ENST00000615229 POLA1P09884 1462 aaPredicted RBP37.37■■■■□ 3.57
ACACA-236ENST00000615229 FGD5Q6ZNL6 1462 aa37.35■■■■□ 3.57
ACACA-236ENST00000615229 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
ACACA-236ENST00000615229 IFT140Q96RY7 1462 aa37.24■■■■□ 3.55
ACACA-236ENST00000615229 RAD54L2Q9Y4B4 1467 aa37.22■■■■□ 3.55
ACACA-236ENST00000615229 WDR97A6NE52 1622 aa37.17■■■■□ 3.54
ACACA-236ENST00000615229 SOGA1O94964 1423 aa37.14■■■■□ 3.54
ACACA-236ENST00000615229 ZNF608Q9ULD9 1512 aaPredicted RBP37.12■■■■□ 3.53
ACACA-236ENST00000615229 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
ACACA-236ENST00000615229 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
ACACA-236ENST00000615229 AQRO60306 1485 aaKnown RBP eCLIP36.92■■■■□ 3.55e-6■■■■■ 28
ACACA-236ENST00000615229 TDRD9Q8NDG6 1382 aaKnown RBP36.9■■■■□ 3.5
ACACA-236ENST00000615229 ABCA5Q8WWZ7 1642 aa36.9■■■■□ 3.5
ACACA-236ENST00000615229 PBRM1Q86U86 1689 aa36.85■■■■□ 3.49
ACACA-236ENST00000615229 TRIM41Q8WV44 630 aa36.77■■■■□ 3.48
ACACA-236ENST00000615229 GAPVD1Q14C86 1478 aa36.76■■■■□ 3.48
ACACA-236ENST00000615229 CHIC1Q5VXU3 224 aa36.69■■■■□ 3.46
ACACA-236ENST00000615229 GRIN2BQ13224 1484 aa36.67■■■■□ 3.46
ACACA-236ENST00000615229 SNAPC4Q5SXM2 1469 aa36.63■■■■□ 3.45
ACACA-236ENST00000615229 CHD1O14646 1710 aa36.58■■■■□ 3.45
ACACA-236ENST00000615229 KIF27Q86VH2 1401 aa36.57■■■■□ 3.44
ACACA-236ENST00000615229 ERICH3Q5RHP9 1530 aa36.55■■■■□ 3.44
ACACA-236ENST00000615229 MAGI1Q96QZ7 1491 aaPredicted RBP36.54■■■■□ 3.44
ACACA-236ENST00000615229 RUSC2Q8N2Y8 1516 aa36.53■■■■□ 3.44
ACACA-236ENST00000615229 ADAMTS12P58397 1594 aa36.51■■■■□ 3.43
ACACA-236ENST00000615229 SYNJ2O15056 1496 aa36.4■■■■□ 3.42
ACACA-236ENST00000615229 CUL7Q14999 1698 aa36.37■■■■□ 3.41
ACACA-236ENST00000615229 IGF1RP08069 1367 aa36.37■■■■□ 3.41
ACACA-236ENST00000615229 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
ACACA-236ENST00000615229 FBLN2P98095 1184 aa36.31■■■■□ 3.4
ACACA-236ENST00000615229 CHMP7Q8WUX9 453 aaPredicted RBP36.24■■■■□ 3.39
ACACA-236ENST00000615229 GRIN2AQ12879 1464 aa36.24■■■■□ 3.39
ACACA-236ENST00000615229 CARMIL1Q5VZK9 1371 aa36.16■■■■□ 3.38
ACACA-236ENST00000615229 EEA1Q15075 1411 aa36.15■■■■□ 3.38
ACACA-236ENST00000615229 OSCARQ8IYS5 282 aa36.15■■■■□ 3.38
ACACA-236ENST00000615229 CEP170Q5SW79 1584 aa36.13■■■■□ 3.37
ACACA-236ENST00000615229 FAM9AQ8IZU1 332 aaPredicted RBP36.09■■■■□ 3.37
ACACA-236ENST00000615229 CLASP1Q7Z460 1538 aa36.08■■■■□ 3.37
ACACA-236ENST00000615229 NUP160Q12769 1436 aa36.05■■■■□ 3.36
ACACA-236ENST00000615229 PRXQ9BXM0 1461 aa36.04■■■■□ 3.36
ACACA-236ENST00000615229 RAPGEF2Q9Y4G8 1499 aa36.02■■■■□ 3.36
ACACA-236ENST00000615229 CSRNP3Q8WYN3 585 aa36.01■■■■□ 3.36
ACACA-236ENST00000615229 DNAJC5Q9H3Z4 198 aa35.95■■■■□ 3.35
ACACA-236ENST00000615229 KIF21BO75037 1637 aa35.9■■■■□ 3.34
ACACA-236ENST00000615229 CTTNBP2Q8WZ74 1663 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms