RNA–Protein interactions for RNA: ENST00000470525.1

PLXNB1-211, Transcript of plexin B1, humanhuman

TSL 5

Gene PLXNB1, Length 835 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-211ENST00000470525 NISCHQ9Y2I1 1504 aa43.92■■■■■ 4.62
PLXNB1-211ENST00000470525 ABCC9O60706 1549 aa40.49■■■■■ 4.07
PLXNB1-211ENST00000470525 CCDC180Q9P1Z9 1646 aa39.85■■■■□ 3.97
PLXNB1-211ENST00000470525 DNAJC5BQ9UF47 199 aa38.64■■■■□ 3.78
PLXNB1-211ENST00000470525 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.72
PLXNB1-211ENST00000470525 NACADO15069 1562 aa37.8■■■■□ 3.64
PLXNB1-211ENST00000470525 PABPN1Q86U42 306 aaKnown RBP eCLIP37.52■■■■□ 3.62e-7■■□□□ 11.4
PLXNB1-211ENST00000470525 UNC13AQ9UPW8 1703 aa37.49■■■■□ 3.59
PLXNB1-211ENST00000470525 DCAF8L2P0C7V8 631 aa37.28■■■■□ 3.56
PLXNB1-211ENST00000470525 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
PLXNB1-211ENST00000470525 MYO15BQ96JP2 1530 aa37.03■■■■□ 3.52
PLXNB1-211ENST00000470525 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
PLXNB1-211ENST00000470525 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
PLXNB1-211ENST00000470525 CECR2Q9BXF3 1484 aa36.57■■■■□ 3.45
PLXNB1-211ENST00000470525 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.4
PLXNB1-211ENST00000470525 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.4
PLXNB1-211ENST00000470525 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
PLXNB1-211ENST00000470525 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
PLXNB1-211ENST00000470525 DNAJC5Q9H3Z4 198 aa36.08■■■■□ 3.37
PLXNB1-211ENST00000470525 CUX2O14529 1486 aa35.27■■■■□ 3.24
PLXNB1-211ENST00000470525 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
PLXNB1-211ENST00000470525 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
PLXNB1-211ENST00000470525 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
PLXNB1-211ENST00000470525 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
PLXNB1-211ENST00000470525 NESP48681 1621 aa34.56■■■■□ 3.12
PLXNB1-211ENST00000470525 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
PLXNB1-211ENST00000470525 SMARCA4P51532 1647 aa34.47■■■■□ 3.11
PLXNB1-211ENST00000470525 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.1
PLXNB1-211ENST00000470525 BAZ1BQ9UIG0 1483 aaKnown RBP34.28■■■■□ 3.08
PLXNB1-211ENST00000470525 LAMC3Q9Y6N6 1575 aa34.26■■■■□ 3.07
PLXNB1-211ENST00000470525 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
PLXNB1-211ENST00000470525 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
PLXNB1-211ENST00000470525 PEG3Q9GZU2 1588 aa34.15■■■■□ 3.06
PLXNB1-211ENST00000470525 TRIM41Q8WV44 630 aa34.14■■■■□ 3.06
PLXNB1-211ENST00000470525 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
PLXNB1-211ENST00000470525 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
PLXNB1-211ENST00000470525 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
PLXNB1-211ENST00000470525 WDR62O43379 1518 aa33.78■■■■□ 3
PLXNB1-211ENST00000470525 CADPSQ9ULU8 1353 aa33.75■■■□□ 2.99
PLXNB1-211ENST00000470525 CEP164Q9UPV0 1460 aa33.51■■■□□ 2.96
PLXNB1-211ENST00000470525 OSCARQ8IYS5 282 aa33.45■■■□□ 2.95
PLXNB1-211ENST00000470525 WIZO95785 1651 aa33.41■■■□□ 2.94
PLXNB1-211ENST00000470525 FANCD2Q9BXW9 1451 aa33.39■■■□□ 2.94
PLXNB1-211ENST00000470525 CFTRP13569 1480 aa33.23■■■□□ 2.91
PLXNB1-211ENST00000470525 RIMBP3CA6NJZ7 1639 aa33.2■■■□□ 2.91
PLXNB1-211ENST00000470525 RIMBP3BA6NNM3 1639 aa33.2■■■□□ 2.91
PLXNB1-211ENST00000470525 RIMBP3Q9UFD9 1639 aa33.2■■■□□ 2.91
PLXNB1-211ENST00000470525 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
PLXNB1-211ENST00000470525 ARHGEF11O15085 1522 aa32.98■■■□□ 2.87
PLXNB1-211ENST00000470525 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
PLXNB1-211ENST00000470525 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
PLXNB1-211ENST00000470525 ZNF608Q9ULD9 1512 aaPredicted RBP32.88■■■□□ 2.85
PLXNB1-211ENST00000470525 IFT140Q96RY7 1462 aa32.87■■■□□ 2.85
PLXNB1-211ENST00000470525 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
PLXNB1-211ENST00000470525 EIF4G3O43432 1585 aaKnown RBP32.72■■■□□ 2.83
PLXNB1-211ENST00000470525 CYB5RLQ6IPT4 315 aa32.71■■■□□ 2.83
PLXNB1-211ENST00000470525 TOPBP1Q92547 1522 aa32.68■■■□□ 2.82
PLXNB1-211ENST00000470525 CHD1O14646 1710 aa32.66■■■□□ 2.82
PLXNB1-211ENST00000470525 ARAP1Q96P48 1450 aa32.6■■■□□ 2.81
PLXNB1-211ENST00000470525 TRHP20396 242 aaPredicted RBP32.59■■■□□ 2.81
PLXNB1-211ENST00000470525 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
PLXNB1-211ENST00000470525 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
PLXNB1-211ENST00000470525 DNMBPQ6XZF7 1577 aa32.52■■■□□ 2.8
PLXNB1-211ENST00000470525 TARBP1Q13395 1621 aaKnown RBP32.5■■■□□ 2.79
PLXNB1-211ENST00000470525 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.791e-6■■■■■ 30.4
PLXNB1-211ENST00000470525 FBLN2P98095 1184 aa32.37■■■□□ 2.77
PLXNB1-211ENST00000470525 POLA1P09884 1462 aaPredicted RBP32.29■■■□□ 2.76
PLXNB1-211ENST00000470525 AEBP2Q6ZN18 517 aaPredicted RBP32.24■■■□□ 2.75
PLXNB1-211ENST00000470525 CLASP1Q7Z460 1538 aa32.22■■■□□ 2.75
PLXNB1-211ENST00000470525 RAD54L2Q9Y4B4 1467 aa32.16■■■□□ 2.74
PLXNB1-211ENST00000470525 SNAPC4Q5SXM2 1469 aa32.14■■■□□ 2.74
PLXNB1-211ENST00000470525 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
PLXNB1-211ENST00000470525 SYNJ1O43426 1573 aa32.13■■■□□ 2.73
PLXNB1-211ENST00000470525 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
PLXNB1-211ENST00000470525 SOGA1O94964 1423 aa32.1■■■□□ 2.73
PLXNB1-211ENST00000470525 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
PLXNB1-211ENST00000470525 CHMP7Q8WUX9 453 aaPredicted RBP32.02■■■□□ 2.72
PLXNB1-211ENST00000470525 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
PLXNB1-211ENST00000470525 SYNJ2O15056 1496 aa31.94■■■□□ 2.7
PLXNB1-211ENST00000470525 GRIN2BQ13224 1484 aa31.94■■■□□ 2.7
PLXNB1-211ENST00000470525 GAPVD1Q14C86 1478 aa31.9■■■□□ 2.7
PLXNB1-211ENST00000470525 PBRM1Q86U86 1689 aa31.85■■■□□ 2.69
PLXNB1-211ENST00000470525 CUX1P39880 1505 aa31.83■■■□□ 2.69
PLXNB1-211ENST00000470525 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
PLXNB1-211ENST00000470525 ERCC6L2Q5T890 1561 aa31.64■■■□□ 2.66
PLXNB1-211ENST00000470525 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
PLXNB1-211ENST00000470525 GRIN2AQ12879 1464 aa31.54■■■□□ 2.64
PLXNB1-211ENST00000470525 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
PLXNB1-211ENST00000470525 KIF13AQ9H1H9 1805 aa31.53■■■□□ 2.64
PLXNB1-211ENST00000470525 SHROOM2Q13796 1616 aa31.47■■■□□ 2.63
PLXNB1-211ENST00000470525 NUP160Q12769 1436 aa31.46■■■□□ 2.63
PLXNB1-211ENST00000470525 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
PLXNB1-211ENST00000470525 FHAD1B1AJZ9 1412 aa31.28■■■□□ 2.6
PLXNB1-211ENST00000470525 WRNQ14191 1432 aaPredicted RBP eCLIP31.27■■■□□ 2.6
PLXNB1-211ENST00000470525 PRG4Q92954 1404 aaPredicted RBP31.19■■■□□ 2.58
PLXNB1-211ENST00000470525 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
PLXNB1-211ENST00000470525 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
PLXNB1-211ENST00000470525 ABCC10Q5T3U5 1492 aa31.17■■■□□ 2.58
PLXNB1-211ENST00000470525 TOP2BQ02880 1626 aa31.14■■■□□ 2.58
PLXNB1-211ENST00000470525 FAM69CQ0P6D2 419 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms