RNA–Protein interactions for RNA: ENST00000599947.1

PNPLA6-218, Transcript of patatin like phospholipase domain containing 6, humanhuman

TSL 2

Gene PNPLA6, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA6-218ENST00000599947 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
PNPLA6-218ENST00000599947 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
PNPLA6-218ENST00000599947 ABCC9O60706 1549 aa25.14■■□□□ 1.62
PNPLA6-218ENST00000599947 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
PNPLA6-218ENST00000599947 NACADO15069 1562 aa24.03■■□□□ 1.44
PNPLA6-218ENST00000599947 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
PNPLA6-218ENST00000599947 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
PNPLA6-218ENST00000599947 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.38
PNPLA6-218ENST00000599947 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
PNPLA6-218ENST00000599947 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
PNPLA6-218ENST00000599947 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■■□□□ 11.5
PNPLA6-218ENST00000599947 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
PNPLA6-218ENST00000599947 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
PNPLA6-218ENST00000599947 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
PNPLA6-218ENST00000599947 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
PNPLA6-218ENST00000599947 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
PNPLA6-218ENST00000599947 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
PNPLA6-218ENST00000599947 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
PNPLA6-218ENST00000599947 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
PNPLA6-218ENST00000599947 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
PNPLA6-218ENST00000599947 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
PNPLA6-218ENST00000599947 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
PNPLA6-218ENST00000599947 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
PNPLA6-218ENST00000599947 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
PNPLA6-218ENST00000599947 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
PNPLA6-218ENST00000599947 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
PNPLA6-218ENST00000599947 BAZ1BQ9UIG0 1483 aaKnown RBP21.89■■□□□ 1.09
PNPLA6-218ENST00000599947 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
PNPLA6-218ENST00000599947 NESP48681 1621 aa21.67■■□□□ 1.06
PNPLA6-218ENST00000599947 CUX2O14529 1486 aa21.64■■□□□ 1.06
PNPLA6-218ENST00000599947 WIZO95785 1651 aa21.63■■□□□ 1.05
PNPLA6-218ENST00000599947 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
PNPLA6-218ENST00000599947 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.05
PNPLA6-218ENST00000599947 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
PNPLA6-218ENST00000599947 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
PNPLA6-218ENST00000599947 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
PNPLA6-218ENST00000599947 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
PNPLA6-218ENST00000599947 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
PNPLA6-218ENST00000599947 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
PNPLA6-218ENST00000599947 CFTRP13569 1480 aa21.32■■□□□ 1
PNPLA6-218ENST00000599947 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
PNPLA6-218ENST00000599947 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
PNPLA6-218ENST00000599947 WDR62O43379 1518 aa21.22■□□□□ 0.99
PNPLA6-218ENST00000599947 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
PNPLA6-218ENST00000599947 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
PNPLA6-218ENST00000599947 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
PNPLA6-218ENST00000599947 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
PNPLA6-218ENST00000599947 ABCC8Q09428 1581 aa20.89■□□□□ 0.94
PNPLA6-218ENST00000599947 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
PNPLA6-218ENST00000599947 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
PNPLA6-218ENST00000599947 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
PNPLA6-218ENST00000599947 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
PNPLA6-218ENST00000599947 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
PNPLA6-218ENST00000599947 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
PNPLA6-218ENST00000599947 POLA1P09884 1462 aaPredicted RBP20.66■□□□□ 0.9
PNPLA6-218ENST00000599947 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
PNPLA6-218ENST00000599947 SOGA1O94964 1423 aa20.59■□□□□ 0.89
PNPLA6-218ENST00000599947 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
PNPLA6-218ENST00000599947 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.89
PNPLA6-218ENST00000599947 CUX1P39880 1505 aa20.57■□□□□ 0.88
PNPLA6-218ENST00000599947 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
PNPLA6-218ENST00000599947 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
PNPLA6-218ENST00000599947 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
PNPLA6-218ENST00000599947 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
PNPLA6-218ENST00000599947 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
PNPLA6-218ENST00000599947 CHD1O14646 1710 aa20.38■□□□□ 0.85
PNPLA6-218ENST00000599947 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
PNPLA6-218ENST00000599947 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
PNPLA6-218ENST00000599947 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
PNPLA6-218ENST00000599947 FBLN2P98095 1184 aa20.36■□□□□ 0.85
PNPLA6-218ENST00000599947 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
PNPLA6-218ENST00000599947 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
PNPLA6-218ENST00000599947 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
PNPLA6-218ENST00000599947 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
PNPLA6-218ENST00000599947 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
PNPLA6-218ENST00000599947 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
PNPLA6-218ENST00000599947 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
PNPLA6-218ENST00000599947 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
PNPLA6-218ENST00000599947 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
PNPLA6-218ENST00000599947 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
PNPLA6-218ENST00000599947 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
PNPLA6-218ENST00000599947 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
PNPLA6-218ENST00000599947 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
PNPLA6-218ENST00000599947 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
PNPLA6-218ENST00000599947 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
PNPLA6-218ENST00000599947 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
PNPLA6-218ENST00000599947 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
PNPLA6-218ENST00000599947 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
PNPLA6-218ENST00000599947 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
PNPLA6-218ENST00000599947 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
PNPLA6-218ENST00000599947 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
PNPLA6-218ENST00000599947 NUP160Q12769 1436 aa20.06■□□□□ 0.8
PNPLA6-218ENST00000599947 CEP170Q5SW79 1584 aa19.99■□□□□ 0.79
PNPLA6-218ENST00000599947 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
PNPLA6-218ENST00000599947 IGF1RP08069 1367 aa19.95■□□□□ 0.78
PNPLA6-218ENST00000599947 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
PNPLA6-218ENST00000599947 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
PNPLA6-218ENST00000599947 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
PNPLA6-218ENST00000599947 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
PNPLA6-218ENST00000599947 CUL7Q14999 1698 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms