RNA–Protein interactions for RNA: ENST00000484377.5

TMEM50B-209, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-209ENST00000484377 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
TMEM50B-209ENST00000484377 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
TMEM50B-209ENST00000484377 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
TMEM50B-209ENST00000484377 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
TMEM50B-209ENST00000484377 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
TMEM50B-209ENST00000484377 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
TMEM50B-209ENST00000484377 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
TMEM50B-209ENST00000484377 ADRA2BP18089 450 aa19.64■□□□□ 0.73
TMEM50B-209ENST00000484377 KCNA4P22459 653 aa19.52■□□□□ 0.72
TMEM50B-209ENST00000484377 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
TMEM50B-209ENST00000484377 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
TMEM50B-209ENST00000484377 FOXD1Q16676 465 aa19.2■□□□□ 0.66
TMEM50B-209ENST00000484377 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-209ENST00000484377 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
TMEM50B-209ENST00000484377 ABCC9O60706 1549 aa18.74■□□□□ 0.59
TMEM50B-209ENST00000484377 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
TMEM50B-209ENST00000484377 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
TMEM50B-209ENST00000484377 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
TMEM50B-209ENST00000484377 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
TMEM50B-209ENST00000484377 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
TMEM50B-209ENST00000484377 NACADO15069 1562 aa18.08■□□□□ 0.48
TMEM50B-209ENST00000484377 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
TMEM50B-209ENST00000484377 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
TMEM50B-209ENST00000484377 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
TMEM50B-209ENST00000484377 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
TMEM50B-209ENST00000484377 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
TMEM50B-209ENST00000484377 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
TMEM50B-209ENST00000484377 ZBTB22O15209 634 aa17.9■□□□□ 0.46
TMEM50B-209ENST00000484377 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
TMEM50B-209ENST00000484377 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
TMEM50B-209ENST00000484377 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
TMEM50B-209ENST00000484377 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
TMEM50B-209ENST00000484377 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
TMEM50B-209ENST00000484377 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.49e-8■■□□□ 11.5
TMEM50B-209ENST00000484377 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
TMEM50B-209ENST00000484377 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
TMEM50B-209ENST00000484377 RTN4Q9NQC3 1192 aaKnown RBP17.41■□□□□ 0.38
TMEM50B-209ENST00000484377 MSH5O43196 834 aa17.36■□□□□ 0.37
TMEM50B-209ENST00000484377 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
TMEM50B-209ENST00000484377 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-209ENST00000484377 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-209ENST00000484377 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
TMEM50B-209ENST00000484377 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
TMEM50B-209ENST00000484377 FKBP8Q14318 412 aa17.01■□□□□ 0.31
TMEM50B-209ENST00000484377 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
TMEM50B-209ENST00000484377 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
TMEM50B-209ENST00000484377 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
TMEM50B-209ENST00000484377 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
TMEM50B-209ENST00000484377 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
TMEM50B-209ENST00000484377 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
TMEM50B-209ENST00000484377 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
TMEM50B-209ENST00000484377 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
TMEM50B-209ENST00000484377 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
TMEM50B-209ENST00000484377 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
TMEM50B-209ENST00000484377 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
TMEM50B-209ENST00000484377 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
TMEM50B-209ENST00000484377 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
TMEM50B-209ENST00000484377 WIZO95785 1651 aa16.69■□□□□ 0.26
TMEM50B-209ENST00000484377 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
TMEM50B-209ENST00000484377 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TMEM50B-209ENST00000484377 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-209ENST00000484377 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-209ENST00000484377 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
TMEM50B-209ENST00000484377 NESP48681 1621 aa16.33■□□□□ 0.2
TMEM50B-209ENST00000484377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
TMEM50B-209ENST00000484377 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-209ENST00000484377 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
TMEM50B-209ENST00000484377 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-209ENST00000484377 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-209ENST00000484377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM50B-209ENST00000484377 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
TMEM50B-209ENST00000484377 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.18
TMEM50B-209ENST00000484377 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
TMEM50B-209ENST00000484377 CFTRP13569 1480 aa16.18■□□□□ 0.18
TMEM50B-209ENST00000484377 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
TMEM50B-209ENST00000484377 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
TMEM50B-209ENST00000484377 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
TMEM50B-209ENST00000484377 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
TMEM50B-209ENST00000484377 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
TMEM50B-209ENST00000484377 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
TMEM50B-209ENST00000484377 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
TMEM50B-209ENST00000484377 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
TMEM50B-209ENST00000484377 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
TMEM50B-209ENST00000484377 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
TMEM50B-209ENST00000484377 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
TMEM50B-209ENST00000484377 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
TMEM50B-209ENST00000484377 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
TMEM50B-209ENST00000484377 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
TMEM50B-209ENST00000484377 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
TMEM50B-209ENST00000484377 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
TMEM50B-209ENST00000484377 WDR62O43379 1518 aa15.91■□□□□ 0.14
TMEM50B-209ENST00000484377 APLP2Q06481 763 aa15.91■□□□□ 0.14
TMEM50B-209ENST00000484377 CUX2O14529 1486 aa15.84■□□□□ 0.13
TMEM50B-209ENST00000484377 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
TMEM50B-209ENST00000484377 VASPP50552 380 aaPredicted RBP15.82■□□□□ 0.12
TMEM50B-209ENST00000484377 CUX1P39880 1505 aa15.82■□□□□ 0.12
TMEM50B-209ENST00000484377 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
TMEM50B-209ENST00000484377 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
TMEM50B-209ENST00000484377 BCANQ96GW7 911 aa15.79■□□□□ 0.12
TMEM50B-209ENST00000484377 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms