Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.721e-14■■□□□ 13.5
DDX59Q5T1V6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.543e-6■■□□□ 13.5
DDX59Q5T1V6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.113e-6■■□□□ 13.5
DDX59Q5T1V6 HPN-207ENST00000599363 1828 ntTSL 520.5■□□□□ 0.871e-10■■□□□ 13.5
DDX59Q5T1V6 HPN-208ENST00000600390 564 ntTSL 416.91■□□□□ 0.31e-10■■□□□ 13.5
DDX59Q5T1V6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.211e-10■■□□□ 13.5
DDX59Q5T1V6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.091e-10■■□□□ 13.5
DDX59Q5T1V6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.96□□□□□ -0.331e-10■■□□□ 13.5
DDX59Q5T1V6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.626e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-209ENST00000431285 1824 ntTSL 522.6■■□□□ 1.216e-7■■□□□ 13.5
DDX59Q5T1V6 AMN-202ENST00000541086 2269 ntTSL 221.89■■□□□ 1.096e-7■■□□□ 13.5
DDX59Q5T1V6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.056e-7■■□□□ 13.5
DDX59Q5T1V6 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.44■□□□□ 0.76e-7■■□□□ 13.5
DDX59Q5T1V6 SP2-204ENST00000637314 531 ntTSL 219.44■□□□□ 0.76e-7■■□□□ 13.5
DDX59Q5T1V6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.697e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-214ENST00000463180 685 ntTSL 217.61■□□□□ 0.416e-7■■□□□ 13.5
DDX59Q5T1V6 SPHK1-205ENST00000588682 858 ntTSL 317.15■□□□□ 0.347e-7■■□□□ 13.5
DDX59Q5T1V6 SPHK1-209ENST00000591762 2502 ntTSL 216.93■□□□□ 0.37e-7■■□□□ 13.5
DDX59Q5T1V6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.216e-7■■□□□ 13.5
DDX59Q5T1V6 FBRS-205ENST00000484152 510 ntTSL 315.58■□□□□ 0.086e-7■■□□□ 13.5
DDX59Q5T1V6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.026e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-212ENST00000450326 921 ntTSL 313.98□□□□□ -0.176e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-207ENST00000415650 579 ntTSL 412.98□□□□□ -0.336e-7■■□□□ 13.5
DDX59Q5T1V6 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.516e-7■■□□□ 13.5
DDX59Q5T1V6 PCSK9-202ENST00000490692 3891 ntTSL 211.52□□□□□ -0.576e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.726e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-211ENST00000443339 3478 ntTSL 210.35□□□□□ -0.756e-7■■□□□ 13.5
DDX59Q5T1V6 LIN7A-201ENST00000261203 989 ntTSL 1 (best)8.27□□□□□ -1.096e-7■■□□□ 13.5
DDX59Q5T1V6 SP2-205ENST00000637943 481 ntTSL 28.22□□□□□ -1.096e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.166e-7■■□□□ 13.5
DDX59Q5T1V6 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.296e-7■■□□□ 13.5
DDX59Q5T1V6 SETD5-221ENST00000478475 477 ntTSL 46.68□□□□□ -1.346e-7■■□□□ 13.5
DDX59Q5T1V6 LIN7A-202ENST00000549417 905 ntTSL 1 (best)5.75□□□□□ -1.496e-7■■□□□ 13.5
DDX59Q5T1V6 PCBP2-220ENST00000550910 449 ntTSL 34.44□□□□□ -1.75e-16■■□□□ 13.5
DDX59Q5T1V6 LAMA5-214ENST00000497363 579 ntTSL 314.89□□□□□ -0.033e-50■■□□□ 13.5
DDX59Q5T1V6 MIR1914-201ENST00000607800 80 ntBASIC11.32□□□□□ -0.68e-26■■□□□ 13.5
DDX59Q5T1V6 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.874e-16■■□□□ 13.4
DDX59Q5T1V6 PPP6R2-206ENST00000427222 1811 ntTSL 517.01■□□□□ 0.313e-7■■□□□ 13.4
DDX59Q5T1V6 PPP6R2-205ENST00000401672 2199 ntTSL 212.93□□□□□ -0.343e-7■■□□□ 13.4
DDX59Q5T1V6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.763e-16■■□□□ 13.4
DDX59Q5T1V6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.2■□□□□ 0.343e-16■■□□□ 13.4
DDX59Q5T1V6 PCED1A-205ENST00000474714 531 ntTSL 313.38□□□□□ -0.273e-16■■□□□ 13.4
DDX59Q5T1V6 PCED1A-206ENST00000487501 712 ntTSL 310.63□□□□□ -0.713e-16■■□□□ 13.4
DDX59Q5T1V6 AC008760.2-201ENST00000614781 1357 ntBASIC10.32□□□□□ -0.762e-13■■□□□ 13.4
DDX59Q5T1V6 FBXW11-207ENST00000519693 758 ntTSL 223.55■■□□□ 1.364e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-208ENST00000520376 686 ntTSL 221.9■■□□□ 1.14e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-212ENST00000523843 2099 ntTSL 520.71■□□□□ 0.914e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.42■□□□□ 0.864e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-210ENST00000522507 306 ntTSL 319.13■□□□□ 0.654e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-204ENST00000517395 636 ntTSL 318.57■□□□□ 0.564e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.384e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.43□□□□□ -0.424e-7■■□□□ 13.3
DDX59Q5T1V6 FBXW11-206ENST00000518752 310 ntTSL 52.41□□□□□ -2.024e-7■■□□□ 13.3
DDX59Q5T1V6 INTS6-205ENST00000461515 602 ntTSL 222.6■■□□□ 1.212e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-213ENST00000486195 555 ntTSL 421.98■■□□□ 1.112e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-217ENST00000491723 713 ntTSL 517.47■□□□□ 0.392e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-207ENST00000469430 3767 ntTSL 212.35□□□□□ -0.432e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.29□□□□□ -1.082e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-209ENST00000483288 597 ntTSL 47.97□□□□□ -1.132e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.22□□□□□ -1.252e-6■■□□□ 13.3
DDX59Q5T1V6 INTS6-212ENST00000485178 474 ntTSL 53.72□□□□□ -1.812e-6■■□□□ 13.3
DDX59Q5T1V6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.68■□□□□ 0.584e-7■■□□□ 13.3
DDX59Q5T1V6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.434e-7■■□□□ 13.3
DDX59Q5T1V6 HM13-213ENST00000469126 756 ntTSL 513.32□□□□□ -0.282e-6■■□□□ 13.3
DDX59Q5T1V6 HM13-220ENST00000492709 1248 ntTSL 513.24□□□□□ -0.292e-6■■□□□ 13.3
DDX59Q5T1V6 HM13-206ENST00000460389 1075 ntTSL 512.77□□□□□ -0.372e-6■■□□□ 13.3
DDX59Q5T1V6 HM13-222ENST00000494153 757 ntTSL 512.18□□□□□ -0.462e-6■■□□□ 13.3
DDX59Q5T1V6 HM13-212ENST00000469097 801 ntTSL 510.19□□□□□ -0.782e-6■■□□□ 13.3
DDX59Q5T1V6 HM13-214ENST00000472128 865 ntTSL 59.09□□□□□ -0.952e-6■■□□□ 13.3
DDX59Q5T1V6 SORBS2-259ENST00000492104 911 ntTSL 37.57□□□□□ -1.29e-18■■□□□ 13.3
DDX59Q5T1V6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.681e-7■■□□□ 13.3
DDX59Q5T1V6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.291e-7■■□□□ 13.3
DDX59Q5T1V6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.071e-7■■□□□ 13.3
DDX59Q5T1V6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.051e-7■■□□□ 13.3
DDX59Q5T1V6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.261e-7■■□□□ 13.3
DDX59Q5T1V6 CHRD-216ENST00000486066 546 ntTSL 416.94■□□□□ 0.32e-8■■□□□ 13.3
DDX59Q5T1V6 CHRD-214ENST00000482805 608 ntTSL 415.11■□□□□ 0.012e-8■■□□□ 13.3
DDX59Q5T1V6 CHRD-210ENST00000461684 677 ntTSL 414.17□□□□□ -0.142e-8■■□□□ 13.3
DDX59Q5T1V6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.261e-6■■□□□ 13.3
DDX59Q5T1V6 PPDPF-203ENST00000464438 373 ntTSL 217.02■□□□□ 0.328e-9■■□□□ 13.3
DDX59Q5T1V6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.07■□□□□ 0.162e-6■■□□□ 13.3
DDX59Q5T1V6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.162e-6■■□□□ 13.3
DDX59Q5T1V6 TFR2-206ENST00000465294 2763 ntTSL 213.74□□□□□ -0.212e-6■■□□□ 13.3
DDX59Q5T1V6 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.272e-6■■□□□ 13.3
DDX59Q5T1V6 USP34-204ENST00000453133 1409 ntTSL 54.74□□□□□ -1.653e-10■■□□□ 13.2
DDX59Q5T1V6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.713e-10■■□□□ 13.2
DDX59Q5T1V6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.689e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-221ENST00000483778 1103 ntTSL 316.1■□□□□ 0.179e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-225ENST00000494465 2365 ntTSL 515.75■□□□□ 0.119e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.039e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.76□□□□□ -0.059e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-201ENST00000344376 1566 ntTSL 514.47□□□□□ -0.099e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)14.32□□□□□ -0.129e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-202ENST00000400771 663 ntTSL 513.97□□□□□ -0.179e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-215ENST00000468018 721 ntTSL 513.7□□□□□ -0.229e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-209ENST00000425239 807 ntTSL 213.3□□□□□ -0.289e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-223ENST00000493618 899 ntTSL 513.11□□□□□ -0.319e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-211ENST00000429899 524 ntTSL 49.16□□□□□ -0.949e-11■■□□□ 13.2
DDX59Q5T1V6 ATG4B-212ENST00000430617 623 ntTSL 39.16□□□□□ -0.949e-11■■□□□ 13.2
Retrieved 100 of 7,289 protein–RNA pairs in 59.8 ms