RNA–Protein interactions for RNA: ENST00000296933.10

FBXW11-202, Transcript of F-box and WD repeat domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXW11, Length 4,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXW11-202ENST00000296933 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
FBXW11-202ENST00000296933 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
FBXW11-202ENST00000296933 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
FBXW11-202ENST00000296933 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
FBXW11-202ENST00000296933 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
FBXW11-202ENST00000296933 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
FBXW11-202ENST00000296933 PELP1Q8IZL8 1130 aaKnown RBP27.87■■■□□ 2.05
FBXW11-202ENST00000296933 ZEB1P37275 1124 aaPredicted RBP27.75■■■□□ 2.03
FBXW11-202ENST00000296933 FAM9AQ8IZU1 332 aaPredicted RBP27.68■■■□□ 2.02
FBXW11-202ENST00000296933 HRCP23327 699 aa27.54■■■□□ 2
FBXW11-202ENST00000296933 CENPBP07199 599 aaPredicted RBP27.53■■■□□ 2
FBXW11-202ENST00000296933 APLP2Q06481 763 aa27.4■■□□□ 1.98
FBXW11-202ENST00000296933 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
FBXW11-202ENST00000296933 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
FBXW11-202ENST00000296933 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
FBXW11-202ENST00000296933 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
FBXW11-202ENST00000296933 MYT1Q01538 1121 aa27.15■■□□□ 1.94
FBXW11-202ENST00000296933 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
FBXW11-202ENST00000296933 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.89
FBXW11-202ENST00000296933 LOC105371045A0A1W2PR82 267 aa26.83■■□□□ 1.89
FBXW11-202ENST00000296933 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
FBXW11-202ENST00000296933 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
FBXW11-202ENST00000296933 ERICH6Q7L0X2 663 aa26.63■■□□□ 1.85
FBXW11-202ENST00000296933 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
FBXW11-202ENST00000296933 NEFLP07196 543 aa26.46■■□□□ 1.83
FBXW11-202ENST00000296933 DIEXFQ68CQ4 756 aaKnown RBP26.24■■□□□ 1.79
FBXW11-202ENST00000296933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.22■■□□□ 1.79
FBXW11-202ENST00000296933 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.78
FBXW11-202ENST00000296933 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
FBXW11-202ENST00000296933 GTF3C3Q9Y5Q9 886 aa25.99■■□□□ 1.75
FBXW11-202ENST00000296933 ITGAEP38570 1179 aa25.82■■□□□ 1.72
FBXW11-202ENST00000296933 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
FBXW11-202ENST00000296933 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
FBXW11-202ENST00000296933 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
FBXW11-202ENST00000296933 BCANQ96GW7 911 aa25.36■■□□□ 1.65
FBXW11-202ENST00000296933 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
FBXW11-202ENST00000296933 DAXXQ9UER7 740 aaPredicted RBP25.34■■□□□ 1.65
FBXW11-202ENST00000296933 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
FBXW11-202ENST00000296933 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
FBXW11-202ENST00000296933 RTL5Q5HYW3 569 aaPredicted RBP25.24■■□□□ 1.63
FBXW11-202ENST00000296933 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
FBXW11-202ENST00000296933 CNGB1Q14028 1251 aaPredicted RBP25.19■■□□□ 1.62
FBXW11-202ENST00000296933 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
FBXW11-202ENST00000296933 FAM50AQ14320 339 aaKnown RBP25.18■■□□□ 1.62
FBXW11-202ENST00000296933 CSRNP3Q8WYN3 585 aa25.15■■□□□ 1.62
FBXW11-202ENST00000296933 ANP32CO43423 234 aa25.15■■□□□ 1.62
FBXW11-202ENST00000296933 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
FBXW11-202ENST00000296933 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
FBXW11-202ENST00000296933 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
FBXW11-202ENST00000296933 ABCC9O60706 1549 aa24.87■■□□□ 1.57
FBXW11-202ENST00000296933 FKBP8Q14318 412 aa24.85■■□□□ 1.57
FBXW11-202ENST00000296933 MIER1Q8N108 512 aa24.83■■□□□ 1.57
FBXW11-202ENST00000296933 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
FBXW11-202ENST00000296933 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
FBXW11-202ENST00000296933 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
FBXW11-202ENST00000296933 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
FBXW11-202ENST00000296933 ZNF326Q5BKZ1 582 aaKnown RBP24.57■■□□□ 1.52
FBXW11-202ENST00000296933 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
FBXW11-202ENST00000296933 HNRNPUQ00839 825 aaKnown RBP eCLIP24.56■■□□□ 1.52
FBXW11-202ENST00000296933 MYT1LQ9UL68 1186 aa24.54■■□□□ 1.52
FBXW11-202ENST00000296933 P3H3Q8IVL6 736 aa24.5■■□□□ 1.51
FBXW11-202ENST00000296933 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
FBXW11-202ENST00000296933 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
FBXW11-202ENST00000296933 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
FBXW11-202ENST00000296933 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
FBXW11-202ENST00000296933 CLIP1P30622 1438 aa24.38■■□□□ 1.49
FBXW11-202ENST00000296933 NPM2Q86SE8 214 aaKnown RBP24.37■■□□□ 1.49
FBXW11-202ENST00000296933 ANP32EQ9BTT0 268 aa24.35■■□□□ 1.49
FBXW11-202ENST00000296933 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.49
FBXW11-202ENST00000296933 EEA1Q15075 1411 aa24.3■■□□□ 1.48
FBXW11-202ENST00000296933 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
FBXW11-202ENST00000296933 CCDC136Q96JN2 1154 aa24.23■■□□□ 1.47
FBXW11-202ENST00000296933 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
FBXW11-202ENST00000296933 NBR1Q14596 966 aa24.21■■□□□ 1.47
FBXW11-202ENST00000296933 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.47
FBXW11-202ENST00000296933 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.46
FBXW11-202ENST00000296933 HIRIP3Q9BW71 556 aaPredicted RBP24.2■■□□□ 1.46
FBXW11-202ENST00000296933 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
FBXW11-202ENST00000296933 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
FBXW11-202ENST00000296933 CANXP27824 592 aaKnown RBP24.15■■□□□ 1.46
FBXW11-202ENST00000296933 EIF5BO60841 1220 aaKnown RBP24.13■■□□□ 1.45
FBXW11-202ENST00000296933 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
FBXW11-202ENST00000296933 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
FBXW11-202ENST00000296933 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.433e-6■■■■■ 42.3
FBXW11-202ENST00000296933 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
FBXW11-202ENST00000296933 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
FBXW11-202ENST00000296933 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
FBXW11-202ENST00000296933 SALL2Q9Y467 1007 aaPredicted RBP24■■□□□ 1.43
FBXW11-202ENST00000296933 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
FBXW11-202ENST00000296933 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.43
FBXW11-202ENST00000296933 MTUS2Q5JR59 1369 aa23.93■■□□□ 1.42
FBXW11-202ENST00000296933 FBLN2P98095 1184 aa23.88■■□□□ 1.41
FBXW11-202ENST00000296933 UPF2Q9HAU5 1272 aaKnown RBP23.87■■□□□ 1.41
FBXW11-202ENST00000296933 PPP4R2Q9NY27 417 aa23.83■■□□□ 1.41
FBXW11-202ENST00000296933 SIN3AQ96ST3 1273 aa23.82■■□□□ 1.4
FBXW11-202ENST00000296933 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.81■■□□□ 1.4
FBXW11-202ENST00000296933 BCL11AQ9H165 835 aa23.79■■□□□ 1.4
FBXW11-202ENST00000296933 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
FBXW11-202ENST00000296933 RRP7BPQ9NSQ0 103 aa23.77■■□□□ 1.4
FBXW11-202ENST00000296933 SOGA1O94964 1423 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms