RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
LIN7A-201ENST00000261203 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
LIN7A-201ENST00000261203 ABCC9O60706 1549 aa20.33■□□□□ 0.85
LIN7A-201ENST00000261203 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
LIN7A-201ENST00000261203 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
LIN7A-201ENST00000261203 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
LIN7A-201ENST00000261203 NACADO15069 1562 aa19.41■□□□□ 0.7
LIN7A-201ENST00000261203 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
LIN7A-201ENST00000261203 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
LIN7A-201ENST00000261203 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
LIN7A-201ENST00000261203 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
LIN7A-201ENST00000261203 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
LIN7A-201ENST00000261203 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
LIN7A-201ENST00000261203 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
LIN7A-201ENST00000261203 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
LIN7A-201ENST00000261203 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
LIN7A-201ENST00000261203 SCRIBQ14160 1630 aa18.71■□□□□ 0.58
LIN7A-201ENST00000261203 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
LIN7A-201ENST00000261203 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
LIN7A-201ENST00000261203 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.53
LIN7A-201ENST00000261203 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
LIN7A-201ENST00000261203 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
LIN7A-201ENST00000261203 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
LIN7A-201ENST00000261203 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
LIN7A-201ENST00000261203 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
LIN7A-201ENST00000261203 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
LIN7A-201ENST00000261203 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
LIN7A-201ENST00000261203 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
LIN7A-201ENST00000261203 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
LIN7A-201ENST00000261203 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
LIN7A-201ENST00000261203 CUX2O14529 1486 aa17.64■□□□□ 0.41
LIN7A-201ENST00000261203 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
LIN7A-201ENST00000261203 NESP48681 1621 aa17.5■□□□□ 0.39
LIN7A-201ENST00000261203 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
LIN7A-201ENST00000261203 WIZO95785 1651 aa17.48■□□□□ 0.39
LIN7A-201ENST00000261203 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
LIN7A-201ENST00000261203 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
LIN7A-201ENST00000261203 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
LIN7A-201ENST00000261203 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
LIN7A-201ENST00000261203 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
LIN7A-201ENST00000261203 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
LIN7A-201ENST00000261203 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
LIN7A-201ENST00000261203 CFTRP13569 1480 aa17.18■□□□□ 0.34
LIN7A-201ENST00000261203 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
LIN7A-201ENST00000261203 WDR62O43379 1518 aa17.16■□□□□ 0.34
LIN7A-201ENST00000261203 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
LIN7A-201ENST00000261203 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
LIN7A-201ENST00000261203 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
LIN7A-201ENST00000261203 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
LIN7A-201ENST00000261203 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
LIN7A-201ENST00000261203 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
LIN7A-201ENST00000261203 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
LIN7A-201ENST00000261203 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
LIN7A-201ENST00000261203 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
LIN7A-201ENST00000261203 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
LIN7A-201ENST00000261203 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
LIN7A-201ENST00000261203 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
LIN7A-201ENST00000261203 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LIN7A-201ENST00000261203 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
LIN7A-201ENST00000261203 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
LIN7A-201ENST00000261203 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
LIN7A-201ENST00000261203 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
LIN7A-201ENST00000261203 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
LIN7A-201ENST00000261203 CUX1P39880 1505 aa16.6■□□□□ 0.25
LIN7A-201ENST00000261203 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
LIN7A-201ENST00000261203 SOGA1O94964 1423 aa16.59■□□□□ 0.25
LIN7A-201ENST00000261203 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
LIN7A-201ENST00000261203 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
LIN7A-201ENST00000261203 CHD1O14646 1710 aa16.56■□□□□ 0.24
LIN7A-201ENST00000261203 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
LIN7A-201ENST00000261203 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
LIN7A-201ENST00000261203 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
LIN7A-201ENST00000261203 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
LIN7A-201ENST00000261203 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
LIN7A-201ENST00000261203 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
LIN7A-201ENST00000261203 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
LIN7A-201ENST00000261203 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
LIN7A-201ENST00000261203 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
LIN7A-201ENST00000261203 FBLN2P98095 1184 aa16.44■□□□□ 0.22
LIN7A-201ENST00000261203 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
LIN7A-201ENST00000261203 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
LIN7A-201ENST00000261203 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
LIN7A-201ENST00000261203 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
LIN7A-201ENST00000261203 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
LIN7A-201ENST00000261203 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
LIN7A-201ENST00000261203 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
LIN7A-201ENST00000261203 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
LIN7A-201ENST00000261203 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
LIN7A-201ENST00000261203 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
LIN7A-201ENST00000261203 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
LIN7A-201ENST00000261203 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
LIN7A-201ENST00000261203 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
LIN7A-201ENST00000261203 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
LIN7A-201ENST00000261203 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
LIN7A-201ENST00000261203 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
LIN7A-201ENST00000261203 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
LIN7A-201ENST00000261203 NUP160Q12769 1436 aa16.18■□□□□ 0.18
LIN7A-201ENST00000261203 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
LIN7A-201ENST00000261203 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
LIN7A-201ENST00000261203 KIF27Q86VH2 1401 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms