RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
ATRN-202ENST00000446916 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
ATRN-202ENST00000446916 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
ATRN-202ENST00000446916 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
ATRN-202ENST00000446916 ABCC9O60706 1549 aa24■■□□□ 1.43
ATRN-202ENST00000446916 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
ATRN-202ENST00000446916 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
ATRN-202ENST00000446916 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
ATRN-202ENST00000446916 HRCP23327 699 aa23.54■■□□□ 1.36
ATRN-202ENST00000446916 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
ATRN-202ENST00000446916 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
ATRN-202ENST00000446916 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
ATRN-202ENST00000446916 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
ATRN-202ENST00000446916 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
ATRN-202ENST00000446916 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
ATRN-202ENST00000446916 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
ATRN-202ENST00000446916 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
ATRN-202ENST00000446916 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
ATRN-202ENST00000446916 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
ATRN-202ENST00000446916 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
ATRN-202ENST00000446916 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
ATRN-202ENST00000446916 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
ATRN-202ENST00000446916 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
ATRN-202ENST00000446916 MYT1Q01538 1121 aa22.41■■□□□ 1.18
ATRN-202ENST00000446916 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
ATRN-202ENST00000446916 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
ATRN-202ENST00000446916 NACADO15069 1562 aa22.34■■□□□ 1.17
ATRN-202ENST00000446916 APLP2Q06481 763 aa22.29■■□□□ 1.16
ATRN-202ENST00000446916 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
ATRN-202ENST00000446916 ATP1B4Q9UN42 357 aaPredicted RBP22.22■■□□□ 1.15
ATRN-202ENST00000446916 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
ATRN-202ENST00000446916 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
ATRN-202ENST00000446916 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
ATRN-202ENST00000446916 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
ATRN-202ENST00000446916 NEUROD1Q13562 356 aa22.14■■□□□ 1.13
ATRN-202ENST00000446916 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
ATRN-202ENST00000446916 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
ATRN-202ENST00000446916 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
ATRN-202ENST00000446916 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
ATRN-202ENST00000446916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
ATRN-202ENST00000446916 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
ATRN-202ENST00000446916 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
ATRN-202ENST00000446916 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
ATRN-202ENST00000446916 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
ATRN-202ENST00000446916 ITGAEP38570 1179 aa21.66■■□□□ 1.06
ATRN-202ENST00000446916 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
ATRN-202ENST00000446916 FBLN2P98095 1184 aa21.59■■□□□ 1.05
ATRN-202ENST00000446916 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.04
ATRN-202ENST00000446916 WIZO95785 1651 aa21.56■■□□□ 1.04
ATRN-202ENST00000446916 P3H3Q8IVL6 736 aa21.56■■□□□ 1.04
ATRN-202ENST00000446916 BCL11AQ9H165 835 aa21.46■■□□□ 1.03
ATRN-202ENST00000446916 ERICH6Q7L0X2 663 aa21.44■■□□□ 1.02
ATRN-202ENST00000446916 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
ATRN-202ENST00000446916 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
ATRN-202ENST00000446916 BCANQ96GW7 911 aa21.42■■□□□ 1.02
ATRN-202ENST00000446916 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
ATRN-202ENST00000446916 ABCC8Q09428 1581 aa21.3■■□□□ 1
ATRN-202ENST00000446916 SMARCA4P51532 1647 aa21.27■■□□□ 1
ATRN-202ENST00000446916 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
ATRN-202ENST00000446916 SOGA1O94964 1423 aa21.21■□□□□ 0.99
ATRN-202ENST00000446916 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
ATRN-202ENST00000446916 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
ATRN-202ENST00000446916 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
ATRN-202ENST00000446916 MIER1Q8N108 512 aa21.1■□□□□ 0.97
ATRN-202ENST00000446916 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
ATRN-202ENST00000446916 NEFLP07196 543 aa21.02■□□□□ 0.96
ATRN-202ENST00000446916 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
ATRN-202ENST00000446916 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
ATRN-202ENST00000446916 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
ATRN-202ENST00000446916 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
ATRN-202ENST00000446916 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
ATRN-202ENST00000446916 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
ATRN-202ENST00000446916 CLIP1P30622 1438 aa20.96■□□□□ 0.95
ATRN-202ENST00000446916 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
ATRN-202ENST00000446916 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
ATRN-202ENST00000446916 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
ATRN-202ENST00000446916 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
ATRN-202ENST00000446916 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
ATRN-202ENST00000446916 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
ATRN-202ENST00000446916 CUX2O14529 1486 aa20.91■□□□□ 0.94
ATRN-202ENST00000446916 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
ATRN-202ENST00000446916 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
ATRN-202ENST00000446916 EEA1Q15075 1411 aa20.86■□□□□ 0.93
ATRN-202ENST00000446916 ZNF777Q9ULD5 760 aaPredicted RBP20.82■□□□□ 0.92
ATRN-202ENST00000446916 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
ATRN-202ENST00000446916 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
ATRN-202ENST00000446916 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
ATRN-202ENST00000446916 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
ATRN-202ENST00000446916 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
ATRN-202ENST00000446916 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
ATRN-202ENST00000446916 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
ATRN-202ENST00000446916 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
ATRN-202ENST00000446916 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
ATRN-202ENST00000446916 NESP48681 1621 aa20.7■□□□□ 0.9
ATRN-202ENST00000446916 PRKCSHP14314 528 aaPredicted RBP20.69■□□□□ 0.9
ATRN-202ENST00000446916 FKBP8Q14318 412 aa20.69■□□□□ 0.9
ATRN-202ENST00000446916 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
ATRN-202ENST00000446916 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
ATRN-202ENST00000446916 CHIC2Q9UKJ5 165 aa20.66■□□□□ 0.9
ATRN-202ENST00000446916 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms