RNA–Protein interactions for RNA: ENST00000360652.6

PCED1A-202, Transcript of PC-esterase domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1A, Length 2,016 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-202ENST00000360652 NISCHQ9Y2I1 1504 aa46.06■■■■■ 4.96
PCED1A-202ENST00000360652 CCDC180Q9P1Z9 1646 aa39.92■■■■□ 3.98
PCED1A-202ENST00000360652 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
PCED1A-202ENST00000360652 DCAF1Q9Y4B6 1507 aa38.09■■■■□ 3.69
PCED1A-202ENST00000360652 DCAF8L2P0C7V8 631 aa37.96■■■■□ 3.67
PCED1A-202ENST00000360652 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
PCED1A-202ENST00000360652 MYO15BQ96JP2 1530 aa37.49■■■■□ 3.59
PCED1A-202ENST00000360652 ABCC9O60706 1549 aa37.41■■■■□ 3.58
PCED1A-202ENST00000360652 NACADO15069 1562 aa37.11■■■■□ 3.53
PCED1A-202ENST00000360652 SCRIBQ14160 1630 aa36.78■■■■□ 3.48
PCED1A-202ENST00000360652 SUPT5HO00267 1087 aaKnown RBP36.69■■■■□ 3.46
PCED1A-202ENST00000360652 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
PCED1A-202ENST00000360652 UNC13AQ9UPW8 1703 aa35.95■■■■□ 3.35
PCED1A-202ENST00000360652 RSF1Q96T23 1441 aaPredicted RBP35.92■■■■□ 3.34
PCED1A-202ENST00000360652 CECR2Q9BXF3 1484 aa35.76■■■■□ 3.32
PCED1A-202ENST00000360652 MROH2BQ7Z745 1585 aa35.6■■■■□ 3.29
PCED1A-202ENST00000360652 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
PCED1A-202ENST00000360652 BAZ1AQ9NRL2 1556 aaPredicted RBP35.54■■■■□ 3.28
PCED1A-202ENST00000360652 PABPN1Q86U42 306 aaKnown RBP eCLIP35.4■■■■□ 3.269e-7■■■□□ 17.5
PCED1A-202ENST00000360652 CHIC1Q5VXU3 224 aa35.36■■■■□ 3.25
PCED1A-202ENST00000360652 WIZO95785 1651 aa35.33■■■■□ 3.25
PCED1A-202ENST00000360652 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
PCED1A-202ENST00000360652 TOP2AP11388 1531 aaKnown RBP34.95■■■■□ 3.19
PCED1A-202ENST00000360652 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
PCED1A-202ENST00000360652 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
PCED1A-202ENST00000360652 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
PCED1A-202ENST00000360652 ATAD2BQ9ULI0 1458 aa34.64■■■■□ 3.14
PCED1A-202ENST00000360652 EIF4G1Q04637 1599 aaKnown RBP34.52■■■■□ 3.12
PCED1A-202ENST00000360652 TRIM41Q8WV44 630 aa34.48■■■■□ 3.11
PCED1A-202ENST00000360652 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
PCED1A-202ENST00000360652 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
PCED1A-202ENST00000360652 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
PCED1A-202ENST00000360652 ABCC8Q09428 1581 aa34.03■■■■□ 3.04
PCED1A-202ENST00000360652 LOC105371045A0A1W2PR82 267 aa34.03■■■■□ 3.04
PCED1A-202ENST00000360652 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
PCED1A-202ENST00000360652 FAM9AQ8IZU1 332 aaPredicted RBP33.85■■■■□ 3.01
PCED1A-202ENST00000360652 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
PCED1A-202ENST00000360652 CFTRP13569 1480 aa33.64■■■□□ 2.98
PCED1A-202ENST00000360652 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
PCED1A-202ENST00000360652 EEA1Q15075 1411 aa33.54■■■□□ 2.96
PCED1A-202ENST00000360652 SOGA1O94964 1423 aa33.51■■■□□ 2.96
PCED1A-202ENST00000360652 TOP2BQ02880 1626 aa33.45■■■□□ 2.95
PCED1A-202ENST00000360652 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
PCED1A-202ENST00000360652 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
PCED1A-202ENST00000360652 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
PCED1A-202ENST00000360652 RUSC2Q8N2Y8 1516 aa33.35■■■□□ 2.93
PCED1A-202ENST00000360652 CSRNP3Q8WYN3 585 aa33.35■■■□□ 2.93
PCED1A-202ENST00000360652 EHMT2Q96KQ7 1210 aa33.35■■■□□ 2.93
PCED1A-202ENST00000360652 CUX1P39880 1505 aa33.25■■■□□ 2.91
PCED1A-202ENST00000360652 TNIKQ9UKE5 1360 aa33.08■■■□□ 2.89
PCED1A-202ENST00000360652 GOLGA3Q08378 1498 aa33.07■■■□□ 2.89
PCED1A-202ENST00000360652 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
PCED1A-202ENST00000360652 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
PCED1A-202ENST00000360652 KIF21BO75037 1637 aa33.05■■■□□ 2.88
PCED1A-202ENST00000360652 LAMC3Q9Y6N6 1575 aa33.02■■■□□ 2.88
PCED1A-202ENST00000360652 NESP48681 1621 aa32.98■■■□□ 2.87
PCED1A-202ENST00000360652 UBTFP17480 764 aaKnown RBP32.95■■■□□ 2.87
PCED1A-202ENST00000360652 PCGF6Q9BYE7 350 aa32.93■■■□□ 2.86
PCED1A-202ENST00000360652 CEP162Q5TB80 1403 aa32.92■■■□□ 2.86
PCED1A-202ENST00000360652 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
PCED1A-202ENST00000360652 KIF27Q86VH2 1401 aa32.91■■■□□ 2.86
PCED1A-202ENST00000360652 TRIM26Q12899 539 aaPredicted RBP32.83■■■□□ 2.85
PCED1A-202ENST00000360652 FGD5Q6ZNL6 1462 aa32.82■■■□□ 2.85
PCED1A-202ENST00000360652 DNMBPQ6XZF7 1577 aa32.81■■■□□ 2.84
PCED1A-202ENST00000360652 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
PCED1A-202ENST00000360652 PRXQ9BXM0 1461 aa32.79■■■□□ 2.84
PCED1A-202ENST00000360652 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
PCED1A-202ENST00000360652 ERICH3Q5RHP9 1530 aa32.76■■■□□ 2.84
PCED1A-202ENST00000360652 TOPBP1Q92547 1522 aa32.73■■■□□ 2.83
PCED1A-202ENST00000360652 CUX2O14529 1486 aa32.7■■■□□ 2.83
PCED1A-202ENST00000360652 POLA1P09884 1462 aaPredicted RBP32.62■■■□□ 2.81
PCED1A-202ENST00000360652 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
PCED1A-202ENST00000360652 IGF1RP08069 1367 aa32.58■■■□□ 2.81
PCED1A-202ENST00000360652 CLIP1P30622 1438 aa32.57■■■□□ 2.8
PCED1A-202ENST00000360652 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
PCED1A-202ENST00000360652 KIF21AQ7Z4S6 1674 aa32.55■■■□□ 2.8
PCED1A-202ENST00000360652 RAD54L2Q9Y4B4 1467 aa32.51■■■□□ 2.8
PCED1A-202ENST00000360652 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
PCED1A-202ENST00000360652 PPARGC1BQ86YN6 1023 aaKnown RBP32.37■■■□□ 2.77
PCED1A-202ENST00000360652 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
PCED1A-202ENST00000360652 VPS8Q8N3P4 1428 aa32.35■■■□□ 2.77
PCED1A-202ENST00000360652 HRCP23327 699 aa32.32■■■□□ 2.76
PCED1A-202ENST00000360652 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
PCED1A-202ENST00000360652 RANGAP1P46060 587 aaPredicted RBP32.27■■■□□ 2.76
PCED1A-202ENST00000360652 CUL7Q14999 1698 aa32.25■■■□□ 2.75
PCED1A-202ENST00000360652 ABCA5Q8WWZ7 1642 aa32.23■■■□□ 2.75
PCED1A-202ENST00000360652 TARBP1Q13395 1621 aaKnown RBP32.21■■■□□ 2.75
PCED1A-202ENST00000360652 ARAP1Q96P48 1450 aa32.18■■■□□ 2.74
PCED1A-202ENST00000360652 TDRD9Q8NDG6 1382 aaKnown RBP32.18■■■□□ 2.74
PCED1A-202ENST00000360652 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
PCED1A-202ENST00000360652 ARHGAP35Q9NRY4 1499 aa32.12■■■□□ 2.73
PCED1A-202ENST00000360652 WDR62O43379 1518 aa32.11■■■□□ 2.73
PCED1A-202ENST00000360652 APLP2Q06481 763 aa32.07■■■□□ 2.72
PCED1A-202ENST00000360652 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
PCED1A-202ENST00000360652 TTBK1Q5TCY1 1321 aaPredicted RBP32.01■■■□□ 2.72
PCED1A-202ENST00000360652 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
PCED1A-202ENST00000360652 CTTNBP2Q8WZ74 1663 aa31.93■■■□□ 2.7
PCED1A-202ENST00000360652 PBRM1Q86U86 1689 aa31.91■■■□□ 2.7
PCED1A-202ENST00000360652 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.72e-12■■■■■ 107.2
PCED1A-202ENST00000360652 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms