RNA–Protein interactions for RNA: ENST00000497363.1

LAMA5-214, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-214ENST00000497363 NISCHQ9Y2I1 1504 aa40.85■■■■■ 4.13
LAMA5-214ENST00000497363 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
LAMA5-214ENST00000497363 ABCC9O60706 1549 aa35.96■■■■□ 3.35
LAMA5-214ENST00000497363 RB1CC1Q8TDY2 1594 aa34.42■■■■□ 3.1
LAMA5-214ENST00000497363 NACADO15069 1562 aa34.32■■■■□ 3.09
LAMA5-214ENST00000497363 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
LAMA5-214ENST00000497363 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
LAMA5-214ENST00000497363 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
LAMA5-214ENST00000497363 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
LAMA5-214ENST00000497363 UNC13AQ9UPW8 1703 aa33.71■■■□□ 2.99
LAMA5-214ENST00000497363 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.97
LAMA5-214ENST00000497363 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
LAMA5-214ENST00000497363 DNAJC5BQ9UF47 199 aa33.42■■■□□ 2.94
LAMA5-214ENST00000497363 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
LAMA5-214ENST00000497363 SHROOM4Q9ULL8 1493 aa33.01■■■□□ 2.88
LAMA5-214ENST00000497363 EIF4G1Q04637 1599 aaKnown RBP32.57■■■□□ 2.8
LAMA5-214ENST00000497363 CC2D2AQ9P2K1 1620 aa32.53■■■□□ 2.8
LAMA5-214ENST00000497363 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
LAMA5-214ENST00000497363 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
LAMA5-214ENST00000497363 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
LAMA5-214ENST00000497363 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
LAMA5-214ENST00000497363 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.66
LAMA5-214ENST00000497363 SMARCA2P51531 1590 aa31.57■■■□□ 2.64
LAMA5-214ENST00000497363 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
LAMA5-214ENST00000497363 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
LAMA5-214ENST00000497363 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
LAMA5-214ENST00000497363 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
LAMA5-214ENST00000497363 WIZO95785 1651 aa31.13■■■□□ 2.57
LAMA5-214ENST00000497363 NESP48681 1621 aa31.06■■■□□ 2.56
LAMA5-214ENST00000497363 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.55
LAMA5-214ENST00000497363 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
LAMA5-214ENST00000497363 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
LAMA5-214ENST00000497363 CUX2O14529 1486 aa30.79■■■□□ 2.52
LAMA5-214ENST00000497363 CADPSQ9ULU8 1353 aa30.76■■■□□ 2.51
LAMA5-214ENST00000497363 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
LAMA5-214ENST00000497363 PDS5BQ9NTI5 1447 aa30.68■■■□□ 2.5
LAMA5-214ENST00000497363 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
LAMA5-214ENST00000497363 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
LAMA5-214ENST00000497363 CFTRP13569 1480 aa30.51■■■□□ 2.48
LAMA5-214ENST00000497363 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
LAMA5-214ENST00000497363 MRC2Q9UBG0 1479 aa30.39■■■□□ 2.46
LAMA5-214ENST00000497363 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
LAMA5-214ENST00000497363 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
LAMA5-214ENST00000497363 WDR62O43379 1518 aa30.32■■■□□ 2.44
LAMA5-214ENST00000497363 DNAJC5Q9H3Z4 198 aa30.3■■■□□ 2.44
LAMA5-214ENST00000497363 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
LAMA5-214ENST00000497363 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
LAMA5-214ENST00000497363 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
LAMA5-214ENST00000497363 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
LAMA5-214ENST00000497363 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
LAMA5-214ENST00000497363 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
LAMA5-214ENST00000497363 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
LAMA5-214ENST00000497363 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
LAMA5-214ENST00000497363 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
LAMA5-214ENST00000497363 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
LAMA5-214ENST00000497363 CUX1P39880 1505 aa29.55■■■□□ 2.32
LAMA5-214ENST00000497363 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
LAMA5-214ENST00000497363 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
LAMA5-214ENST00000497363 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
LAMA5-214ENST00000497363 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.313e-7■■■■■ 30.5
LAMA5-214ENST00000497363 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
LAMA5-214ENST00000497363 SOGA1O94964 1423 aa29.47■■■□□ 2.31
LAMA5-214ENST00000497363 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
LAMA5-214ENST00000497363 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
LAMA5-214ENST00000497363 CHD1O14646 1710 aa29.21■■■□□ 2.27
LAMA5-214ENST00000497363 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
LAMA5-214ENST00000497363 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
LAMA5-214ENST00000497363 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
LAMA5-214ENST00000497363 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
LAMA5-214ENST00000497363 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
LAMA5-214ENST00000497363 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
LAMA5-214ENST00000497363 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
LAMA5-214ENST00000497363 FBLN2P98095 1184 aa29.12■■■□□ 2.25
LAMA5-214ENST00000497363 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
LAMA5-214ENST00000497363 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
LAMA5-214ENST00000497363 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
LAMA5-214ENST00000497363 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
LAMA5-214ENST00000497363 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
LAMA5-214ENST00000497363 RIMBP3CA6NJZ7 1639 aa29.05■■■□□ 2.24
LAMA5-214ENST00000497363 RIMBP3BA6NNM3 1639 aa29.05■■■□□ 2.24
LAMA5-214ENST00000497363 RIMBP3Q9UFD9 1639 aa29.05■■■□□ 2.24
LAMA5-214ENST00000497363 CHMP7Q8WUX9 453 aaPredicted RBP29.01■■■□□ 2.23
LAMA5-214ENST00000497363 ARHGEF11O15085 1522 aa29■■■□□ 2.23
LAMA5-214ENST00000497363 SYNJ2O15056 1496 aa29■■■□□ 2.23
LAMA5-214ENST00000497363 CLASP1Q7Z460 1538 aa28.91■■■□□ 2.22
LAMA5-214ENST00000497363 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
LAMA5-214ENST00000497363 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
LAMA5-214ENST00000497363 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
LAMA5-214ENST00000497363 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
LAMA5-214ENST00000497363 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
LAMA5-214ENST00000497363 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
LAMA5-214ENST00000497363 NUP160Q12769 1436 aa28.69■■■□□ 2.18
LAMA5-214ENST00000497363 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
LAMA5-214ENST00000497363 IGF1RP08069 1367 aa28.61■■■□□ 2.17
LAMA5-214ENST00000497363 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
LAMA5-214ENST00000497363 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
LAMA5-214ENST00000497363 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
LAMA5-214ENST00000497363 CUL7Q14999 1698 aa28.46■■■□□ 2.15
LAMA5-214ENST00000497363 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
LAMA5-214ENST00000497363 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms