RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 NISCHQ9Y2I1 1504 aa40.01■■■■□ 3.99
CHRD-210ENST00000461684 ABCC9O60706 1549 aa36.11■■■■□ 3.37
CHRD-210ENST00000461684 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
CHRD-210ENST00000461684 RB1CC1Q8TDY2 1594 aa34.36■■■■□ 3.09
CHRD-210ENST00000461684 NACADO15069 1562 aa34.08■■■■□ 3.05
CHRD-210ENST00000461684 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
CHRD-210ENST00000461684 DCAF8L2P0C7V8 631 aa33.83■■■■□ 3.01
CHRD-210ENST00000461684 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
CHRD-210ENST00000461684 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.972e-7■■■■□ 22.4
CHRD-210ENST00000461684 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
CHRD-210ENST00000461684 BICRAQ9NZM4 1560 aa33.32■■■□□ 2.92
CHRD-210ENST00000461684 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
CHRD-210ENST00000461684 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
CHRD-210ENST00000461684 SHROOM4Q9ULL8 1493 aa32.9■■■□□ 2.86
CHRD-210ENST00000461684 SCRIBQ14160 1630 aa32.77■■■□□ 2.84
CHRD-210ENST00000461684 CC2D2AQ9P2K1 1620 aa32.65■■■□□ 2.82
CHRD-210ENST00000461684 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
CHRD-210ENST00000461684 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
CHRD-210ENST00000461684 NCAPD3P42695 1498 aa31.44■■■□□ 2.62
CHRD-210ENST00000461684 DNAJC5Q9H3Z4 198 aa31.37■■■□□ 2.61
CHRD-210ENST00000461684 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
CHRD-210ENST00000461684 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
CHRD-210ENST00000461684 SMARCA2P51531 1590 aa31.26■■■□□ 2.59
CHRD-210ENST00000461684 CUX2O14529 1486 aa31.22■■■□□ 2.59
CHRD-210ENST00000461684 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
CHRD-210ENST00000461684 HMGXB3Q12766 1538 aa31.2■■■□□ 2.59
CHRD-210ENST00000461684 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
CHRD-210ENST00000461684 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.56
CHRD-210ENST00000461684 NESP48681 1621 aa30.97■■■□□ 2.55
CHRD-210ENST00000461684 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
CHRD-210ENST00000461684 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
CHRD-210ENST00000461684 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
CHRD-210ENST00000461684 THOC2Q8NI27 1593 aaKnown RBP30.72■■■□□ 2.51
CHRD-210ENST00000461684 KIF21AQ7Z4S6 1674 aa30.64■■■□□ 2.5
CHRD-210ENST00000461684 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
CHRD-210ENST00000461684 WIZO95785 1651 aa30.47■■■□□ 2.47
CHRD-210ENST00000461684 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
CHRD-210ENST00000461684 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
CHRD-210ENST00000461684 WDR62O43379 1518 aa30.27■■■□□ 2.44
CHRD-210ENST00000461684 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
CHRD-210ENST00000461684 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
CHRD-210ENST00000461684 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
CHRD-210ENST00000461684 CFTRP13569 1480 aa30.09■■■□□ 2.41
CHRD-210ENST00000461684 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
CHRD-210ENST00000461684 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
CHRD-210ENST00000461684 PRDM2Q13029 1718 aa29.89■■■□□ 2.38
CHRD-210ENST00000461684 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
CHRD-210ENST00000461684 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
CHRD-210ENST00000461684 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
CHRD-210ENST00000461684 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
CHRD-210ENST00000461684 TOPBP1Q92547 1522 aa29.54■■■□□ 2.32
CHRD-210ENST00000461684 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
CHRD-210ENST00000461684 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
CHRD-210ENST00000461684 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
CHRD-210ENST00000461684 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
CHRD-210ENST00000461684 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
CHRD-210ENST00000461684 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
CHRD-210ENST00000461684 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
CHRD-210ENST00000461684 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
CHRD-210ENST00000461684 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
CHRD-210ENST00000461684 CHD1O14646 1710 aa29.25■■■□□ 2.27
CHRD-210ENST00000461684 AQRO60306 1485 aaKnown RBP eCLIP29.24■■■□□ 2.273e-7■■□□□ 11.6
CHRD-210ENST00000461684 POLA1P09884 1462 aaPredicted RBP29.22■■■□□ 2.27
CHRD-210ENST00000461684 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
CHRD-210ENST00000461684 FBLN2P98095 1184 aa29.1■■■□□ 2.25
CHRD-210ENST00000461684 SOGA1O94964 1423 aa29.1■■■□□ 2.25
CHRD-210ENST00000461684 CYB5RLQ6IPT4 315 aa29.07■■■□□ 2.24
CHRD-210ENST00000461684 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
CHRD-210ENST00000461684 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
CHRD-210ENST00000461684 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
CHRD-210ENST00000461684 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
CHRD-210ENST00000461684 CUX1P39880 1505 aa28.95■■■□□ 2.23
CHRD-210ENST00000461684 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
CHRD-210ENST00000461684 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
CHRD-210ENST00000461684 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
CHRD-210ENST00000461684 SYNJ1O43426 1573 aa28.87■■■□□ 2.21
CHRD-210ENST00000461684 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
CHRD-210ENST00000461684 CLASP1Q7Z460 1538 aa28.85■■■□□ 2.21
CHRD-210ENST00000461684 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
CHRD-210ENST00000461684 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
CHRD-210ENST00000461684 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
CHRD-210ENST00000461684 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
CHRD-210ENST00000461684 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
CHRD-210ENST00000461684 ABCA5Q8WWZ7 1642 aa28.68■■■□□ 2.18
CHRD-210ENST00000461684 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
CHRD-210ENST00000461684 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
CHRD-210ENST00000461684 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
CHRD-210ENST00000461684 GRIN2AQ12879 1464 aa28.49■■■□□ 2.15
CHRD-210ENST00000461684 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
CHRD-210ENST00000461684 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
CHRD-210ENST00000461684 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
CHRD-210ENST00000461684 NUP160Q12769 1436 aa28.39■■■□□ 2.14
CHRD-210ENST00000461684 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
CHRD-210ENST00000461684 ERCC6L2Q5T890 1561 aa28.37■■■□□ 2.13
CHRD-210ENST00000461684 ERICH3Q5RHP9 1530 aa28.34■■■□□ 2.13
CHRD-210ENST00000461684 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
CHRD-210ENST00000461684 PRG4Q92954 1404 aaPredicted RBP28.13■■■□□ 2.09
CHRD-210ENST00000461684 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
CHRD-210ENST00000461684 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
CHRD-210ENST00000461684 RUSC2Q8N2Y8 1516 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms