RNA–Protein interactions for RNA: ENST00000402096.5

ATG4B-204, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 1,685 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-204ENST00000402096 NISCHQ9Y2I1 1504 aa47.12■■■■■ 5.13
ATG4B-204ENST00000402096 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
ATG4B-204ENST00000402096 ZCCHC6Q5VYS8 1495 aaKnown RBP39.51■■■■□ 3.92
ATG4B-204ENST00000402096 ABCC9O60706 1549 aa39.36■■■■□ 3.89
ATG4B-204ENST00000402096 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
ATG4B-204ENST00000402096 DCAF1Q9Y4B6 1507 aa38.93■■■■□ 3.82
ATG4B-204ENST00000402096 MYO15BQ96JP2 1530 aa38.59■■■■□ 3.77
ATG4B-204ENST00000402096 NACADO15069 1562 aa38.53■■■■□ 3.76
ATG4B-204ENST00000402096 RB1CC1Q8TDY2 1594 aa38.31■■■■□ 3.72
ATG4B-204ENST00000402096 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.71
ATG4B-204ENST00000402096 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
ATG4B-204ENST00000402096 UNC13AQ9UPW8 1703 aa37.59■■■■□ 3.61
ATG4B-204ENST00000402096 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
ATG4B-204ENST00000402096 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.52
ATG4B-204ENST00000402096 CECR2Q9BXF3 1484 aa36.64■■■■□ 3.46
ATG4B-204ENST00000402096 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
ATG4B-204ENST00000402096 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
ATG4B-204ENST00000402096 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
ATG4B-204ENST00000402096 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
ATG4B-204ENST00000402096 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
ATG4B-204ENST00000402096 WIZO95785 1651 aa36.15■■■■□ 3.38
ATG4B-204ENST00000402096 EIF4G1Q04637 1599 aaKnown RBP36.04■■■■□ 3.36
ATG4B-204ENST00000402096 PEG3Q9GZU2 1588 aa35.86■■■■□ 3.33
ATG4B-204ENST00000402096 SMARCA2P51531 1590 aa35.8■■■■□ 3.32
ATG4B-204ENST00000402096 ATAD2BQ9ULI0 1458 aa35.77■■■■□ 3.32
ATG4B-204ENST00000402096 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
ATG4B-204ENST00000402096 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
ATG4B-204ENST00000402096 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
ATG4B-204ENST00000402096 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
ATG4B-204ENST00000402096 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
ATG4B-204ENST00000402096 CCDC88BA6NC98 1476 aa35.33■■■■□ 3.25
ATG4B-204ENST00000402096 DNAJC5BQ9UF47 199 aa34.92■■■■□ 3.18
ATG4B-204ENST00000402096 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.17
ATG4B-204ENST00000402096 CFTRP13569 1480 aa34.63■■■■□ 3.13
ATG4B-204ENST00000402096 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
ATG4B-204ENST00000402096 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
ATG4B-204ENST00000402096 ABCC8Q09428 1581 aa34.53■■■■□ 3.12
ATG4B-204ENST00000402096 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
ATG4B-204ENST00000402096 NESP48681 1621 aa34.43■■■■□ 3.1
ATG4B-204ENST00000402096 LAMC3Q9Y6N6 1575 aa34.42■■■■□ 3.1
ATG4B-204ENST00000402096 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
ATG4B-204ENST00000402096 FANCD2Q9BXW9 1451 aa34.23■■■■□ 3.07
ATG4B-204ENST00000402096 SYNJ1O43426 1573 aa34.21■■■■□ 3.07
ATG4B-204ENST00000402096 PDS5BQ9NTI5 1447 aa34.14■■■■□ 3.06
ATG4B-204ENST00000402096 KIF21AQ7Z4S6 1674 aa34.1■■■■□ 3.05
ATG4B-204ENST00000402096 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
ATG4B-204ENST00000402096 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
ATG4B-204ENST00000402096 CEP164Q9UPV0 1460 aa34.08■■■■□ 3.05
ATG4B-204ENST00000402096 CUX1P39880 1505 aa34.06■■■■□ 3.04
ATG4B-204ENST00000402096 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
ATG4B-204ENST00000402096 FAM9AQ8IZU1 332 aaPredicted RBP33.85■■■■□ 3.01
ATG4B-204ENST00000402096 TOPBP1Q92547 1522 aa33.83■■■■□ 3.01
ATG4B-204ENST00000402096 URB2Q14146 1524 aaKnown RBP33.82■■■■□ 3
ATG4B-204ENST00000402096 ERCC6Q03468 1493 aa33.81■■■■□ 3
ATG4B-204ENST00000402096 FGD5Q6ZNL6 1462 aa33.76■■■■□ 3
ATG4B-204ENST00000402096 SOGA1O94964 1423 aa33.75■■■□□ 2.99
ATG4B-204ENST00000402096 MRC2Q9UBG0 1479 aa33.73■■■□□ 2.99
ATG4B-204ENST00000402096 RUSC2Q8N2Y8 1516 aa33.66■■■□□ 2.98
ATG4B-204ENST00000402096 EEA1Q15075 1411 aa33.63■■■□□ 2.97
ATG4B-204ENST00000402096 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
ATG4B-204ENST00000402096 THOC2Q8NI27 1593 aaKnown RBP33.56■■■□□ 2.96
ATG4B-204ENST00000402096 WDR62O43379 1518 aa33.56■■■□□ 2.96
ATG4B-204ENST00000402096 RAD54L2Q9Y4B4 1467 aa33.52■■■□□ 2.96
ATG4B-204ENST00000402096 LOC105371045A0A1W2PR82 267 aa33.51■■■□□ 2.95
ATG4B-204ENST00000402096 CUX2O14529 1486 aa33.48■■■□□ 2.95
ATG4B-204ENST00000402096 KIF27Q86VH2 1401 aa33.48■■■□□ 2.95
ATG4B-204ENST00000402096 CSRNP3Q8WYN3 585 aa33.47■■■□□ 2.95
ATG4B-204ENST00000402096 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
ATG4B-204ENST00000402096 EHMT2Q96KQ7 1210 aa33.42■■■□□ 2.94
ATG4B-204ENST00000402096 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
ATG4B-204ENST00000402096 TARBP1Q13395 1621 aaKnown RBP33.36■■■□□ 2.93
ATG4B-204ENST00000402096 IFT140Q96RY7 1462 aa33.26■■■□□ 2.92
ATG4B-204ENST00000402096 KIF21BO75037 1637 aa33.25■■■□□ 2.91
ATG4B-204ENST00000402096 ABCA5Q8WWZ7 1642 aa33.22■■■□□ 2.91
ATG4B-204ENST00000402096 TDRD9Q8NDG6 1382 aaKnown RBP33.22■■■□□ 2.91
ATG4B-204ENST00000402096 GOLGA3Q08378 1498 aa33.19■■■□□ 2.9
ATG4B-204ENST00000402096 GAPVD1Q14C86 1478 aa33.16■■■□□ 2.9
ATG4B-204ENST00000402096 IGF1RP08069 1367 aa33.15■■■□□ 2.9
ATG4B-204ENST00000402096 PRXQ9BXM0 1461 aa33.12■■■□□ 2.89
ATG4B-204ENST00000402096 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
ATG4B-204ENST00000402096 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
ATG4B-204ENST00000402096 ZNF608Q9ULD9 1512 aaPredicted RBP33.08■■■□□ 2.89
ATG4B-204ENST00000402096 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.89
ATG4B-204ENST00000402096 UBTFP17480 764 aaKnown RBP33.07■■■□□ 2.89
ATG4B-204ENST00000402096 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.883e-7■■■■□ 19.9
ATG4B-204ENST00000402096 CUL7Q14999 1698 aa33.06■■■□□ 2.88
ATG4B-204ENST00000402096 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
ATG4B-204ENST00000402096 CARMIL1Q5VZK9 1371 aa33.03■■■□□ 2.88
ATG4B-204ENST00000402096 TNIKQ9UKE5 1360 aa32.97■■■□□ 2.87
ATG4B-204ENST00000402096 GRIN2BQ13224 1484 aa32.95■■■□□ 2.86
ATG4B-204ENST00000402096 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
ATG4B-204ENST00000402096 CEP162Q5TB80 1403 aa32.8■■■□□ 2.84
ATG4B-204ENST00000402096 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
ATG4B-204ENST00000402096 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
ATG4B-204ENST00000402096 MAGI1Q96QZ7 1491 aaPredicted RBP32.71■■■□□ 2.83
ATG4B-204ENST00000402096 CTTNBP2Q8WZ74 1663 aa32.69■■■□□ 2.82
ATG4B-204ENST00000402096 RANGAP1P46060 587 aaPredicted RBP32.69■■■□□ 2.82
ATG4B-204ENST00000402096 CLIP1P30622 1438 aa32.63■■■□□ 2.81
ATG4B-204ENST00000402096 SYNJ2O15056 1496 aa32.58■■■□□ 2.81
ATG4B-204ENST00000402096 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms