RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
ATG4B-202ENST00000400771 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
ATG4B-202ENST00000400771 ABCC9O60706 1549 aa33.66■■■□□ 2.98
ATG4B-202ENST00000400771 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
ATG4B-202ENST00000400771 NACADO15069 1562 aa32.27■■■□□ 2.76
ATG4B-202ENST00000400771 ZCCHC6Q5VYS8 1495 aaKnown RBP32.05■■■□□ 2.72
ATG4B-202ENST00000400771 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
ATG4B-202ENST00000400771 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
ATG4B-202ENST00000400771 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
ATG4B-202ENST00000400771 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
ATG4B-202ENST00000400771 BICRAQ9NZM4 1560 aa31.52■■■□□ 2.64
ATG4B-202ENST00000400771 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
ATG4B-202ENST00000400771 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
ATG4B-202ENST00000400771 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
ATG4B-202ENST00000400771 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
ATG4B-202ENST00000400771 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
ATG4B-202ENST00000400771 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
ATG4B-202ENST00000400771 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.44
ATG4B-202ENST00000400771 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
ATG4B-202ENST00000400771 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
ATG4B-202ENST00000400771 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
ATG4B-202ENST00000400771 NCAPD3P42695 1498 aa29.73■■■□□ 2.35
ATG4B-202ENST00000400771 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
ATG4B-202ENST00000400771 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
ATG4B-202ENST00000400771 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
ATG4B-202ENST00000400771 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
ATG4B-202ENST00000400771 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
ATG4B-202ENST00000400771 WIZO95785 1651 aa29.37■■■□□ 2.29
ATG4B-202ENST00000400771 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
ATG4B-202ENST00000400771 NESP48681 1621 aa29.13■■■□□ 2.25
ATG4B-202ENST00000400771 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
ATG4B-202ENST00000400771 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
ATG4B-202ENST00000400771 ERCC6Q03468 1493 aa28.96■■■□□ 2.23
ATG4B-202ENST00000400771 KIF21AQ7Z4S6 1674 aa28.95■■■□□ 2.22
ATG4B-202ENST00000400771 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
ATG4B-202ENST00000400771 CUX2O14529 1486 aa28.83■■■□□ 2.21
ATG4B-202ENST00000400771 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
ATG4B-202ENST00000400771 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
ATG4B-202ENST00000400771 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
ATG4B-202ENST00000400771 CFTRP13569 1480 aa28.66■■■□□ 2.18
ATG4B-202ENST00000400771 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
ATG4B-202ENST00000400771 WDR62O43379 1518 aa28.53■■■□□ 2.16
ATG4B-202ENST00000400771 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
ATG4B-202ENST00000400771 FANCD2Q9BXW9 1451 aa28.52■■■□□ 2.16
ATG4B-202ENST00000400771 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
ATG4B-202ENST00000400771 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
ATG4B-202ENST00000400771 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
ATG4B-202ENST00000400771 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
ATG4B-202ENST00000400771 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
ATG4B-202ENST00000400771 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
ATG4B-202ENST00000400771 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
ATG4B-202ENST00000400771 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
ATG4B-202ENST00000400771 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
ATG4B-202ENST00000400771 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
ATG4B-202ENST00000400771 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
ATG4B-202ENST00000400771 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
ATG4B-202ENST00000400771 CUX1P39880 1505 aa27.84■■■□□ 2.05
ATG4B-202ENST00000400771 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
ATG4B-202ENST00000400771 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
ATG4B-202ENST00000400771 RAD54L2Q9Y4B4 1467 aa27.67■■■□□ 2.02
ATG4B-202ENST00000400771 BIVM-ERCC5R4GMW8 1640 aa27.64■■■□□ 2.02
ATG4B-202ENST00000400771 CHD1O14646 1710 aa27.58■■■□□ 2.01
ATG4B-202ENST00000400771 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.012e-7■■■□□ 18.4
ATG4B-202ENST00000400771 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
ATG4B-202ENST00000400771 SOGA1O94964 1423 aa27.58■■■□□ 2
ATG4B-202ENST00000400771 TOP2BQ02880 1626 aa27.56■■■□□ 2
ATG4B-202ENST00000400771 PBRM1Q86U86 1689 aa27.52■■■□□ 2
ATG4B-202ENST00000400771 ABCA5Q8WWZ7 1642 aa27.5■■□□□ 1.99
ATG4B-202ENST00000400771 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
ATG4B-202ENST00000400771 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
ATG4B-202ENST00000400771 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
ATG4B-202ENST00000400771 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
ATG4B-202ENST00000400771 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
ATG4B-202ENST00000400771 GRIN2BQ13224 1484 aa27.35■■□□□ 1.97
ATG4B-202ENST00000400771 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
ATG4B-202ENST00000400771 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
ATG4B-202ENST00000400771 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
ATG4B-202ENST00000400771 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
ATG4B-202ENST00000400771 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
ATG4B-202ENST00000400771 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
ATG4B-202ENST00000400771 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
ATG4B-202ENST00000400771 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
ATG4B-202ENST00000400771 ARHGEF11O15085 1522 aa27.19■■□□□ 1.94
ATG4B-202ENST00000400771 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
ATG4B-202ENST00000400771 FBLN2P98095 1184 aa27.08■■□□□ 1.93
ATG4B-202ENST00000400771 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
ATG4B-202ENST00000400771 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
ATG4B-202ENST00000400771 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
ATG4B-202ENST00000400771 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
ATG4B-202ENST00000400771 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
ATG4B-202ENST00000400771 NUP160Q12769 1436 aa26.95■■□□□ 1.9
ATG4B-202ENST00000400771 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
ATG4B-202ENST00000400771 CUL7Q14999 1698 aa26.92■■□□□ 1.9
ATG4B-202ENST00000400771 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
ATG4B-202ENST00000400771 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
ATG4B-202ENST00000400771 KIF27Q86VH2 1401 aa26.85■■□□□ 1.89
ATG4B-202ENST00000400771 ERCC6L2Q5T890 1561 aa26.82■■□□□ 1.88
ATG4B-202ENST00000400771 IGF1RP08069 1367 aa26.76■■□□□ 1.87
ATG4B-202ENST00000400771 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
ATG4B-202ENST00000400771 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms