Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 GPM6B-208ENST00000475307 678 ntTSL 314.91□□□□□ -0.026e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-209ENST00000493085 558 ntTSL 313.55□□□□□ -0.246e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.756e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC10.05□□□□□ -0.86e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.53□□□□□ -0.886e-9■■■□□ 17.4
DDX21Q9NR30 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.378e-8■■■□□ 17.2
DDX21Q9NR30 FAM98B-204ENST00000559431 305 ntTSL 513.18□□□□□ -0.38e-8■■■□□ 17.2
DDX21Q9NR30 SEC13-207ENST00000397105 883 ntTSL 227.05■■□□□ 1.923e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-210ENST00000428626 567 ntTSL 320.31■□□□□ 0.843e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-213ENST00000445064 669 ntTSL 520.18■□□□□ 0.823e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-206ENST00000397102 582 ntTSL 320.06■□□□□ 0.83e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.763e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.623e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-212ENST00000432213 594 ntTSL 418.63■□□□□ 0.573e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-211ENST00000431352 832 ntTSL 518.15■□□□□ 0.53e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-204ENST00000397099 555 ntTSL 418.11■□□□□ 0.493e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-205ENST00000397101 592 ntTSL 218.06■□□□□ 0.483e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.473e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC16.99■□□□□ 0.313e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.73■□□□□ 0.273e-7■■■□□ 17.1
DDX21Q9NR30 WDFY2-202ENST00000460145 395 ntTSL 510.9□□□□□ -0.663e-7■■■□□ 17.1
DDX21Q9NR30 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.773e-7■■■□□ 17.1
DDX21Q9NR30 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.112e-9■■■□□ 16.3
DDX21Q9NR30 PHKB-207ENST00000566037 1032 ntTSL 230.36■■■□□ 2.453e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-203ENST00000563376 697 ntTSL 317.76■□□□□ 0.433e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.013e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC14.69□□□□□ -0.063e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-217ENST00000570047 797 ntTSL 313.64□□□□□ -0.233e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-214ENST00000567402 1617 ntTSL 1 (best)13.14□□□□□ -0.313e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC11.82□□□□□ -0.523e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.49□□□□□ -0.893e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-210ENST00000511802 4734 ntTSL 29.19□□□□□ -0.943e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.63□□□□□ -1.033e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.23e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-206ENST00000565424 828 ntTSL 36.38□□□□□ -1.393e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-214ENST00000606497 1334 ntTSL 46.23□□□□□ -1.413e-8■■■□□ 16.1
DDX21Q9NR30 NR2F2-AS1-202ENST00000557863 515 ntTSL 320.69■□□□□ 0.96e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC15.65■□□□□ 0.16e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC13.28□□□□□ -0.286e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC12.6□□□□□ -0.396e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.75□□□□□ -1.016e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.56□□□□□ -1.686e-11■■■□□ 16
DDX21Q9NR30 SYNCRIP-203ENST00000444272 610 ntTSL 320.38■□□□□ 0.852e-7■■■□□ 15.8
DDX21Q9NR30 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.592e-7■■■□□ 15.8
DDX21Q9NR30 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.59■■■□□ 2.012e-13■■■□□ 15.8
DDX21Q9NR30 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.47■□□□□ 0.551e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-216ENST00000541416 996 ntTSL 216.22■□□□□ 0.191e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC14.79□□□□□ -0.041e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-209ENST00000538654 2768 ntTSL 210.23□□□□□ -0.771e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC9.96□□□□□ -0.821e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.27□□□□□ -1.091e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.43□□□□□ -1.221e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-207ENST00000537965 578 ntTSL 57.02□□□□□ -1.291e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.93□□□□□ -1.31e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.81□□□□□ -1.321e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-214ENST00000540865 784 ntTSL 56.32□□□□□ -1.41e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.481e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-220ENST00000544550 636 ntTSL 25.66□□□□□ -1.51e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-224ENST00000545688 610 ntTSL 35.53□□□□□ -1.521e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.45□□□□□ -1.541e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-203ENST00000537024 532 ntTSL 55.4□□□□□ -1.541e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-222ENST00000545308 646 ntTSL 25.21□□□□□ -1.581e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.15□□□□□ -1.591e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.79□□□□□ -1.641e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.01□□□□□ -1.771e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-202ENST00000535689 550 ntTSL 23.98□□□□□ -1.771e-323■■■□□ 15.6
DDX21Q9NR30 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.331e-323■■■□□ 15.6
DDX21Q9NR30 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.17■■□□□ 1.462e-6■■■□□ 15.5
DDX21Q9NR30 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.25■■□□□ 1.152e-6■■■□□ 15.5
DDX21Q9NR30 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.7■■□□□ 1.062e-6■■■□□ 15.5
DDX21Q9NR30 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.892e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.26■□□□□ 0.672e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.592e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-6■■■□□ 15.5
DDX21Q9NR30 NMU-206ENST00000515325 616 ntTSL 36.55□□□□□ -1.362e-6■■■□□ 15.5
DDX21Q9NR30 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.97■□□□□ 0.791e-14■■■□□ 14.9
DDX21Q9NR30 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.591e-14■■■□□ 14.9
DDX21Q9NR30 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.64■□□□□ 0.572e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC14.5□□□□□ -0.092e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-224ENST00000454068 688 ntTSL 5 BASIC12.7□□□□□ -0.382e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-214ENST00000436656 822 ntTSL 312.39□□□□□ -0.432e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-216ENST00000443799 897 ntTSL 512.39□□□□□ -0.432e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-203ENST00000416952 799 ntTSL 212□□□□□ -0.492e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-210ENST00000431268 1698 ntTSL 211.41□□□□□ -0.582e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-219ENST00000449289 542 ntTSL 3 BASIC10.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-220ENST00000449589 712 ntTSL 310.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-226ENST00000455838 632 ntTSL 210.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-211ENST00000432536 959 ntTSL 2 BASIC9.58□□□□□ -0.882e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-227ENST00000456293 583 ntTSL 39.33□□□□□ -0.922e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-228ENST00000456812 723 ntTSL 38.9□□□□□ -0.982e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-206ENST00000422183 745 ntTSL 27.83□□□□□ -1.162e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.71□□□□□ -1.182e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-201ENST00000412059 979 ntTSL 57.27□□□□□ -1.252e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-204ENST00000421068 1060 ntTSL 26.85□□□□□ -1.312e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-205ENST00000422008 497 ntTSL 36.07□□□□□ -1.442e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-215ENST00000442067 1114 ntTSL 26.06□□□□□ -1.442e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.94□□□□□ -1.462e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.08□□□□□ -1.62e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-213ENST00000436285 772 ntTSL 24.48□□□□□ -1.692e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-229ENST00000458220 469 ntTSL 24.44□□□□□ -1.72e-26■■■□□ 14.6
Retrieved 100 of 1,140 protein–RNA pairs in 158.7 ms