RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
SNHG1-207ENST00000537965 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
SNHG1-207ENST00000537965 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
SNHG1-207ENST00000537965 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
SNHG1-207ENST00000537965 FOXD1Q16676 465 aa16.54■□□□□ 0.24
SNHG1-207ENST00000537965 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
SNHG1-207ENST00000537965 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
SNHG1-207ENST00000537965 ADRA2BP18089 450 aa15.72■□□□□ 0.11
SNHG1-207ENST00000537965 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
SNHG1-207ENST00000537965 MSH5O43196 834 aa15.33■□□□□ 0.04
SNHG1-207ENST00000537965 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
SNHG1-207ENST00000537965 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SNHG1-207ENST00000537965 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-207ENST00000537965 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
SNHG1-207ENST00000537965 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
SNHG1-207ENST00000537965 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
SNHG1-207ENST00000537965 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
SNHG1-207ENST00000537965 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
SNHG1-207ENST00000537965 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
SNHG1-207ENST00000537965 KCNA4P22459 653 aa13.8□□□□□ -0.2
SNHG1-207ENST00000537965 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
SNHG1-207ENST00000537965 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
SNHG1-207ENST00000537965 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
SNHG1-207ENST00000537965 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
SNHG1-207ENST00000537965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNHG1-207ENST00000537965 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
SNHG1-207ENST00000537965 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
SNHG1-207ENST00000537965 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
SNHG1-207ENST00000537965 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
SNHG1-207ENST00000537965 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
SNHG1-207ENST00000537965 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
SNHG1-207ENST00000537965 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
SNHG1-207ENST00000537965 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-207ENST00000537965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
SNHG1-207ENST00000537965 ZBTB22O15209 634 aa12.69□□□□□ -0.38
SNHG1-207ENST00000537965 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
SNHG1-207ENST00000537965 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-207ENST00000537965 APLP2Q06481 763 aa12.6□□□□□ -0.39
SNHG1-207ENST00000537965 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
SNHG1-207ENST00000537965 CAPN15O75808 1086 aa12.55□□□□□ -0.4
SNHG1-207ENST00000537965 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
SNHG1-207ENST00000537965 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
SNHG1-207ENST00000537965 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-207ENST00000537965 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-207ENST00000537965 DSG3P32926 999 aa12.42□□□□□ -0.42
SNHG1-207ENST00000537965 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
SNHG1-207ENST00000537965 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SNHG1-207ENST00000537965 ABCB7O75027 752 aa12.28□□□□□ -0.44
SNHG1-207ENST00000537965 POLA2Q14181 598 aa12.22□□□□□ -0.45
SNHG1-207ENST00000537965 ABCC9O60706 1549 aa12.08□□□□□ -0.48
SNHG1-207ENST00000537965 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
SNHG1-207ENST00000537965 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
SNHG1-207ENST00000537965 FBLN2P98095 1184 aa11.87□□□□□ -0.51
SNHG1-207ENST00000537965 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
SNHG1-207ENST00000537965 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
SNHG1-207ENST00000537965 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
SNHG1-207ENST00000537965 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
SNHG1-207ENST00000537965 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
SNHG1-207ENST00000537965 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
SNHG1-207ENST00000537965 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
SNHG1-207ENST00000537965 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-207ENST00000537965 SSUH2Q9Y2M2 353 aa11.55□□□□□ -0.56
SNHG1-207ENST00000537965 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
SNHG1-207ENST00000537965 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
SNHG1-207ENST00000537965 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
SNHG1-207ENST00000537965 NACADO15069 1562 aa11.42□□□□□ -0.58
SNHG1-207ENST00000537965 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
SNHG1-207ENST00000537965 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNHG1-207ENST00000537965 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
SNHG1-207ENST00000537965 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
SNHG1-207ENST00000537965 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
SNHG1-207ENST00000537965 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
SNHG1-207ENST00000537965 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
SNHG1-207ENST00000537965 POTEHQ6S545 545 aa11.28□□□□□ -0.6
SNHG1-207ENST00000537965 PROM2Q8N271 834 aa11.27□□□□□ -0.61
SNHG1-207ENST00000537965 FKBP8Q14318 412 aa11.26□□□□□ -0.61
SNHG1-207ENST00000537965 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNHG1-207ENST00000537965 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
SNHG1-207ENST00000537965 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
SNHG1-207ENST00000537965 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
SNHG1-207ENST00000537965 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
SNHG1-207ENST00000537965 BICRAQ9NZM4 1560 aa11.12□□□□□ -0.63
SNHG1-207ENST00000537965 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
SNHG1-207ENST00000537965 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
SNHG1-207ENST00000537965 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SNHG1-207ENST00000537965 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
SNHG1-207ENST00000537965 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
SNHG1-207ENST00000537965 ZCCHC6Q5VYS8 1495 aaKnown RBP10.99□□□□□ -0.65
SNHG1-207ENST00000537965 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
SNHG1-207ENST00000537965 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
SNHG1-207ENST00000537965 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
SNHG1-207ENST00000537965 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
SNHG1-207ENST00000537965 HAX1O00165 279 aa10.91□□□□□ -0.66
SNHG1-207ENST00000537965 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
SNHG1-207ENST00000537965 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
SNHG1-207ENST00000537965 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
SNHG1-207ENST00000537965 MIER1Q8N108 512 aa10.88□□□□□ -0.67
SNHG1-207ENST00000537965 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
SNHG1-207ENST00000537965 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
SNHG1-207ENST00000537965 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms