RNA–Protein interactions for RNA: ENST00000449589.5

GAS5-220, Transcript of growth arrest specific 5, humanhuman

TSL 3

Gene GAS5, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-220ENST00000449589 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
GAS5-220ENST00000449589 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
GAS5-220ENST00000449589 ABCC9O60706 1549 aa17.11■□□□□ 0.33
GAS5-220ENST00000449589 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
GAS5-220ENST00000449589 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
GAS5-220ENST00000449589 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
GAS5-220ENST00000449589 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
GAS5-220ENST00000449589 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
GAS5-220ENST00000449589 NACADO15069 1562 aa16.09■□□□□ 0.17
GAS5-220ENST00000449589 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
GAS5-220ENST00000449589 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
GAS5-220ENST00000449589 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
GAS5-220ENST00000449589 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
GAS5-220ENST00000449589 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
GAS5-220ENST00000449589 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
GAS5-220ENST00000449589 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
GAS5-220ENST00000449589 BICRAQ9NZM4 1560 aa15.5■□□□□ 0.07
GAS5-220ENST00000449589 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
GAS5-220ENST00000449589 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
GAS5-220ENST00000449589 CC2D2AQ9P2K1 1620 aa15.37■□□□□ 0.05
GAS5-220ENST00000449589 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
GAS5-220ENST00000449589 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
GAS5-220ENST00000449589 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
GAS5-220ENST00000449589 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
GAS5-220ENST00000449589 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
GAS5-220ENST00000449589 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
GAS5-220ENST00000449589 NCAPD3P42695 1498 aa14.83□□□□□ -0.03
GAS5-220ENST00000449589 CUX2O14529 1486 aa14.82□□□□□ -0.04
GAS5-220ENST00000449589 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
GAS5-220ENST00000449589 BAZ1BQ9UIG0 1483 aaKnown RBP14.81□□□□□ -0.04
GAS5-220ENST00000449589 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
GAS5-220ENST00000449589 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
GAS5-220ENST00000449589 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
GAS5-220ENST00000449589 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
GAS5-220ENST00000449589 WIZO95785 1651 aa14.65□□□□□ -0.06
GAS5-220ENST00000449589 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
GAS5-220ENST00000449589 NESP48681 1621 aa14.54□□□□□ -0.08
GAS5-220ENST00000449589 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
GAS5-220ENST00000449589 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
GAS5-220ENST00000449589 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
GAS5-220ENST00000449589 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.1
GAS5-220ENST00000449589 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
GAS5-220ENST00000449589 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
GAS5-220ENST00000449589 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
GAS5-220ENST00000449589 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
GAS5-220ENST00000449589 CFTRP13569 1480 aa14.33□□□□□ -0.12
GAS5-220ENST00000449589 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
GAS5-220ENST00000449589 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
GAS5-220ENST00000449589 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
GAS5-220ENST00000449589 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
GAS5-220ENST00000449589 WDR62O43379 1518 aa14.14□□□□□ -0.15
GAS5-220ENST00000449589 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
GAS5-220ENST00000449589 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
GAS5-220ENST00000449589 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
GAS5-220ENST00000449589 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
GAS5-220ENST00000449589 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
GAS5-220ENST00000449589 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
GAS5-220ENST00000449589 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
GAS5-220ENST00000449589 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
GAS5-220ENST00000449589 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
GAS5-220ENST00000449589 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
GAS5-220ENST00000449589 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
GAS5-220ENST00000449589 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
GAS5-220ENST00000449589 CYB5RLQ6IPT4 315 aa13.93□□□□□ -0.18
GAS5-220ENST00000449589 ARHGEF11O15085 1522 aa13.93□□□□□ -0.18
GAS5-220ENST00000449589 SOGA1O94964 1423 aa13.92□□□□□ -0.18
GAS5-220ENST00000449589 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
GAS5-220ENST00000449589 CUX1P39880 1505 aa13.91□□□□□ -0.18
GAS5-220ENST00000449589 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
GAS5-220ENST00000449589 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
GAS5-220ENST00000449589 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
GAS5-220ENST00000449589 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.19
GAS5-220ENST00000449589 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.22e-21■■■■■ 41.8
GAS5-220ENST00000449589 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
GAS5-220ENST00000449589 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
GAS5-220ENST00000449589 FBLN2P98095 1184 aa13.8□□□□□ -0.2
GAS5-220ENST00000449589 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
GAS5-220ENST00000449589 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
GAS5-220ENST00000449589 WDR97A6NE52 1622 aa13.77□□□□□ -0.21
GAS5-220ENST00000449589 ARAP1Q96P48 1450 aa13.77□□□□□ -0.21
GAS5-220ENST00000449589 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
GAS5-220ENST00000449589 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
GAS5-220ENST00000449589 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
GAS5-220ENST00000449589 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
GAS5-220ENST00000449589 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
GAS5-220ENST00000449589 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
GAS5-220ENST00000449589 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
GAS5-220ENST00000449589 CHD1O14646 1710 aa13.68□□□□□ -0.22
GAS5-220ENST00000449589 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
GAS5-220ENST00000449589 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
GAS5-220ENST00000449589 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
GAS5-220ENST00000449589 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
GAS5-220ENST00000449589 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
GAS5-220ENST00000449589 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
GAS5-220ENST00000449589 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
GAS5-220ENST00000449589 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
GAS5-220ENST00000449589 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
GAS5-220ENST00000449589 FOXD1Q16676 465 aa13.53□□□□□ -0.24
GAS5-220ENST00000449589 IGF1RP08069 1367 aa13.52□□□□□ -0.25
GAS5-220ENST00000449589 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms