RNA–Protein interactions for RNA: ENST00000456293.5

GAS5-227, Transcript of growth arrest specific 5, humanhuman

TSL 3

Gene GAS5, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-227ENST00000456293 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
GAS5-227ENST00000456293 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
GAS5-227ENST00000456293 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
GAS5-227ENST00000456293 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
GAS5-227ENST00000456293 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
GAS5-227ENST00000456293 ABCC9O60706 1549 aa15.2■□□□□ 0.02
GAS5-227ENST00000456293 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
GAS5-227ENST00000456293 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
GAS5-227ENST00000456293 NACADO15069 1562 aa14.64□□□□□ -0.07
GAS5-227ENST00000456293 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
GAS5-227ENST00000456293 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
GAS5-227ENST00000456293 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
GAS5-227ENST00000456293 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
GAS5-227ENST00000456293 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
GAS5-227ENST00000456293 FOXD1Q16676 465 aa14.31□□□□□ -0.12
GAS5-227ENST00000456293 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
GAS5-227ENST00000456293 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
GAS5-227ENST00000456293 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
GAS5-227ENST00000456293 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
GAS5-227ENST00000456293 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
GAS5-227ENST00000456293 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
GAS5-227ENST00000456293 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
GAS5-227ENST00000456293 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
GAS5-227ENST00000456293 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
GAS5-227ENST00000456293 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
GAS5-227ENST00000456293 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
GAS5-227ENST00000456293 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
GAS5-227ENST00000456293 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
GAS5-227ENST00000456293 MSH5O43196 834 aa13.47□□□□□ -0.25
GAS5-227ENST00000456293 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
GAS5-227ENST00000456293 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
GAS5-227ENST00000456293 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
GAS5-227ENST00000456293 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
GAS5-227ENST00000456293 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
GAS5-227ENST00000456293 WIZO95785 1651 aa13.34□□□□□ -0.27
GAS5-227ENST00000456293 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
GAS5-227ENST00000456293 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
GAS5-227ENST00000456293 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
GAS5-227ENST00000456293 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
GAS5-227ENST00000456293 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
GAS5-227ENST00000456293 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
GAS5-227ENST00000456293 NESP48681 1621 aa13.13□□□□□ -0.31
GAS5-227ENST00000456293 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
GAS5-227ENST00000456293 ADRA2BP18089 450 aa13.09□□□□□ -0.31
GAS5-227ENST00000456293 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
GAS5-227ENST00000456293 KIF21AQ7Z4S6 1674 aa13.06□□□□□ -0.32
GAS5-227ENST00000456293 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
GAS5-227ENST00000456293 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
GAS5-227ENST00000456293 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
GAS5-227ENST00000456293 CUX2O14529 1486 aa12.99□□□□□ -0.33
GAS5-227ENST00000456293 CFTRP13569 1480 aa12.99□□□□□ -0.33
GAS5-227ENST00000456293 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
GAS5-227ENST00000456293 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
GAS5-227ENST00000456293 CEP164Q9UPV0 1460 aa12.95□□□□□ -0.34
GAS5-227ENST00000456293 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
GAS5-227ENST00000456293 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
GAS5-227ENST00000456293 WDR62O43379 1518 aa12.87□□□□□ -0.35
GAS5-227ENST00000456293 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
GAS5-227ENST00000456293 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
GAS5-227ENST00000456293 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
GAS5-227ENST00000456293 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
GAS5-227ENST00000456293 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
GAS5-227ENST00000456293 CUX1P39880 1505 aa12.62□□□□□ -0.39
GAS5-227ENST00000456293 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
GAS5-227ENST00000456293 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
GAS5-227ENST00000456293 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
GAS5-227ENST00000456293 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
GAS5-227ENST00000456293 SOGA1O94964 1423 aa12.57□□□□□ -0.4
GAS5-227ENST00000456293 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
GAS5-227ENST00000456293 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
GAS5-227ENST00000456293 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
GAS5-227ENST00000456293 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
GAS5-227ENST00000456293 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
GAS5-227ENST00000456293 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
GAS5-227ENST00000456293 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
GAS5-227ENST00000456293 SYNJ1O43426 1573 aa12.52□□□□□ -0.4
GAS5-227ENST00000456293 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.411e-24■■■■■ 41.4
GAS5-227ENST00000456293 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
GAS5-227ENST00000456293 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
GAS5-227ENST00000456293 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
GAS5-227ENST00000456293 CHD1O14646 1710 aa12.46□□□□□ -0.41
GAS5-227ENST00000456293 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
GAS5-227ENST00000456293 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
GAS5-227ENST00000456293 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
GAS5-227ENST00000456293 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
GAS5-227ENST00000456293 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
GAS5-227ENST00000456293 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
GAS5-227ENST00000456293 FBLN2P98095 1184 aa12.37□□□□□ -0.43
GAS5-227ENST00000456293 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
GAS5-227ENST00000456293 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
GAS5-227ENST00000456293 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
GAS5-227ENST00000456293 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
GAS5-227ENST00000456293 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
GAS5-227ENST00000456293 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
GAS5-227ENST00000456293 CUL7Q14999 1698 aa12.27□□□□□ -0.45
GAS5-227ENST00000456293 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
GAS5-227ENST00000456293 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
GAS5-227ENST00000456293 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
GAS5-227ENST00000456293 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
GAS5-227ENST00000456293 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms