RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
SNHG1-203ENST00000537024 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
SNHG1-203ENST00000537024 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
SNHG1-203ENST00000537024 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
SNHG1-203ENST00000537024 FOXD1Q16676 465 aa14.5□□□□□ -0.09
SNHG1-203ENST00000537024 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
SNHG1-203ENST00000537024 MSH5O43196 834 aa13.63□□□□□ -0.23
SNHG1-203ENST00000537024 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
SNHG1-203ENST00000537024 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
SNHG1-203ENST00000537024 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
SNHG1-203ENST00000537024 ADRA2BP18089 450 aa13.27□□□□□ -0.29
SNHG1-203ENST00000537024 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-203ENST00000537024 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
SNHG1-203ENST00000537024 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
SNHG1-203ENST00000537024 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
SNHG1-203ENST00000537024 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
SNHG1-203ENST00000537024 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
SNHG1-203ENST00000537024 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
SNHG1-203ENST00000537024 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
SNHG1-203ENST00000537024 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
SNHG1-203ENST00000537024 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
SNHG1-203ENST00000537024 C1QBPQ07021 282 aaKnown RBP11.43□□□□□ -0.58
SNHG1-203ENST00000537024 KCNA4P22459 653 aa11.4□□□□□ -0.58
SNHG1-203ENST00000537024 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
SNHG1-203ENST00000537024 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
SNHG1-203ENST00000537024 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
SNHG1-203ENST00000537024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNHG1-203ENST00000537024 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
SNHG1-203ENST00000537024 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
SNHG1-203ENST00000537024 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
SNHG1-203ENST00000537024 DSG3P32926 999 aa10.8□□□□□ -0.68
SNHG1-203ENST00000537024 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
SNHG1-203ENST00000537024 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
SNHG1-203ENST00000537024 POTEHQ6S545 545 aa10.78□□□□□ -0.68
SNHG1-203ENST00000537024 CAPN15O75808 1086 aa10.75□□□□□ -0.69
SNHG1-203ENST00000537024 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
SNHG1-203ENST00000537024 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
SNHG1-203ENST00000537024 ABCB7O75027 752 aa10.5□□□□□ -0.73
SNHG1-203ENST00000537024 ZBTB22O15209 634 aa10.47□□□□□ -0.73
SNHG1-203ENST00000537024 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
SNHG1-203ENST00000537024 APLP2Q06481 763 aa10.46□□□□□ -0.73
SNHG1-203ENST00000537024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-203ENST00000537024 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
SNHG1-203ENST00000537024 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
SNHG1-203ENST00000537024 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-203ENST00000537024 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
SNHG1-203ENST00000537024 POLA2Q14181 598 aa10.19□□□□□ -0.78
SNHG1-203ENST00000537024 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
SNHG1-203ENST00000537024 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
SNHG1-203ENST00000537024 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
SNHG1-203ENST00000537024 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
SNHG1-203ENST00000537024 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
SNHG1-203ENST00000537024 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-203ENST00000537024 REM2Q8IYK8 340 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-203ENST00000537024 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-203ENST00000537024 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
SNHG1-203ENST00000537024 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
SNHG1-203ENST00000537024 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
SNHG1-203ENST00000537024 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
SNHG1-203ENST00000537024 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNHG1-203ENST00000537024 ABCC9O60706 1549 aa9.77□□□□□ -0.84
SNHG1-203ENST00000537024 HAX1O00165 279 aa9.77□□□□□ -0.85
SNHG1-203ENST00000537024 FKBP8Q14318 412 aa9.77□□□□□ -0.85
SNHG1-203ENST00000537024 EVX2Q03828 476 aa9.69□□□□□ -0.86
SNHG1-203ENST00000537024 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-203ENST00000537024 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
SNHG1-203ENST00000537024 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
SNHG1-203ENST00000537024 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
SNHG1-203ENST00000537024 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
SNHG1-203ENST00000537024 FBLN2P98095 1184 aa9.55□□□□□ -0.88
SNHG1-203ENST00000537024 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
SNHG1-203ENST00000537024 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-203ENST00000537024 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-203ENST00000537024 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
SNHG1-203ENST00000537024 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
SNHG1-203ENST00000537024 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
SNHG1-203ENST00000537024 SLC24A1O60721 1099 aa9.46□□□□□ -0.9
SNHG1-203ENST00000537024 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-203ENST00000537024 GABBR2O75899 941 aa9.42□□□□□ -0.9
SNHG1-203ENST00000537024 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
SNHG1-203ENST00000537024 CHADLQ6NUI6 762 aa9.38□□□□□ -0.91
SNHG1-203ENST00000537024 LHX8Q68G74 356 aa9.35□□□□□ -0.91
SNHG1-203ENST00000537024 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
SNHG1-203ENST00000537024 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
SNHG1-203ENST00000537024 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
SNHG1-203ENST00000537024 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNHG1-203ENST00000537024 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
SNHG1-203ENST00000537024 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
SNHG1-203ENST00000537024 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
SNHG1-203ENST00000537024 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-203ENST00000537024 PROM2Q8N271 834 aa9.19□□□□□ -0.94
SNHG1-203ENST00000537024 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-203ENST00000537024 CLCN6P51797 869 aa9.13□□□□□ -0.95
SNHG1-203ENST00000537024 ZNF579Q8NAF0 562 aaKnown RBP9.07□□□□□ -0.96
SNHG1-203ENST00000537024 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
SNHG1-203ENST00000537024 IFNLR1Q8IU57 520 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-203ENST00000537024 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
SNHG1-203ENST00000537024 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
SNHG1-203ENST00000537024 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
SNHG1-203ENST00000537024 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms