RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
SEC13-211ENST00000431352 ABCC9O60706 1549 aa31.31■■■□□ 2.6
SEC13-211ENST00000431352 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
SEC13-211ENST00000431352 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
SEC13-211ENST00000431352 NACADO15069 1562 aa29.51■■■□□ 2.31
SEC13-211ENST00000431352 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
SEC13-211ENST00000431352 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
SEC13-211ENST00000431352 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
SEC13-211ENST00000431352 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
SEC13-211ENST00000431352 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
SEC13-211ENST00000431352 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
SEC13-211ENST00000431352 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
SEC13-211ENST00000431352 DCAF1Q9Y4B6 1507 aa28.7■■■□□ 2.19
SEC13-211ENST00000431352 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
SEC13-211ENST00000431352 SHROOM4Q9ULL8 1493 aa28.43■■■□□ 2.14
SEC13-211ENST00000431352 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
SEC13-211ENST00000431352 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
SEC13-211ENST00000431352 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
SEC13-211ENST00000431352 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
SEC13-211ENST00000431352 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
SEC13-211ENST00000431352 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
SEC13-211ENST00000431352 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
SEC13-211ENST00000431352 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
SEC13-211ENST00000431352 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
SEC13-211ENST00000431352 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
SEC13-211ENST00000431352 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
SEC13-211ENST00000431352 CUX2O14529 1486 aa26.9■■□□□ 1.9
SEC13-211ENST00000431352 NESP48681 1621 aa26.89■■□□□ 1.9
SEC13-211ENST00000431352 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
SEC13-211ENST00000431352 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
SEC13-211ENST00000431352 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
SEC13-211ENST00000431352 LAMC3Q9Y6N6 1575 aa26.64■■□□□ 1.86
SEC13-211ENST00000431352 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
SEC13-211ENST00000431352 WIZO95785 1651 aa26.55■■□□□ 1.84
SEC13-211ENST00000431352 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
SEC13-211ENST00000431352 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
SEC13-211ENST00000431352 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
SEC13-211ENST00000431352 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
SEC13-211ENST00000431352 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
SEC13-211ENST00000431352 WDR62O43379 1518 aa26.22■■□□□ 1.79
SEC13-211ENST00000431352 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
SEC13-211ENST00000431352 CEP164Q9UPV0 1460 aa26.2■■□□□ 1.78
SEC13-211ENST00000431352 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
SEC13-211ENST00000431352 CFTRP13569 1480 aa26.12■■□□□ 1.77
SEC13-211ENST00000431352 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
SEC13-211ENST00000431352 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
SEC13-211ENST00000431352 PRDM2Q13029 1718 aa25.87■■□□□ 1.73
SEC13-211ENST00000431352 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
SEC13-211ENST00000431352 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
SEC13-211ENST00000431352 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
SEC13-211ENST00000431352 ZNF608Q9ULD9 1512 aaPredicted RBP25.65■■□□□ 1.7
SEC13-211ENST00000431352 IFT140Q96RY7 1462 aa25.65■■□□□ 1.7
SEC13-211ENST00000431352 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
SEC13-211ENST00000431352 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
SEC13-211ENST00000431352 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
SEC13-211ENST00000431352 TARBP1Q13395 1621 aaKnown RBP25.42■■□□□ 1.66
SEC13-211ENST00000431352 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
SEC13-211ENST00000431352 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.668e-9■■■■■ 32.7
SEC13-211ENST00000431352 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.66
SEC13-211ENST00000431352 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.66
SEC13-211ENST00000431352 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.66
SEC13-211ENST00000431352 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
SEC13-211ENST00000431352 CHD1O14646 1710 aa25.32■■□□□ 1.64
SEC13-211ENST00000431352 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
SEC13-211ENST00000431352 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SEC13-211ENST00000431352 SOGA1O94964 1423 aa25.28■■□□□ 1.64
SEC13-211ENST00000431352 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
SEC13-211ENST00000431352 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
SEC13-211ENST00000431352 CUX1P39880 1505 aa25.24■■□□□ 1.63
SEC13-211ENST00000431352 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
SEC13-211ENST00000431352 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
SEC13-211ENST00000431352 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
SEC13-211ENST00000431352 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
SEC13-211ENST00000431352 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
SEC13-211ENST00000431352 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
SEC13-211ENST00000431352 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
SEC13-211ENST00000431352 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
SEC13-211ENST00000431352 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
SEC13-211ENST00000431352 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
SEC13-211ENST00000431352 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
SEC13-211ENST00000431352 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
SEC13-211ENST00000431352 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
SEC13-211ENST00000431352 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
SEC13-211ENST00000431352 ABCA5Q8WWZ7 1642 aa24.92■■□□□ 1.58
SEC13-211ENST00000431352 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
SEC13-211ENST00000431352 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
SEC13-211ENST00000431352 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
SEC13-211ENST00000431352 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
SEC13-211ENST00000431352 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
SEC13-211ENST00000431352 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
SEC13-211ENST00000431352 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
SEC13-211ENST00000431352 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
SEC13-211ENST00000431352 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
SEC13-211ENST00000431352 NUP160Q12769 1436 aa24.64■■□□□ 1.54
SEC13-211ENST00000431352 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
SEC13-211ENST00000431352 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
SEC13-211ENST00000431352 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
SEC13-211ENST00000431352 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
SEC13-211ENST00000431352 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
SEC13-211ENST00000431352 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms