RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
SNHG1-210ENST00000539303 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
SNHG1-210ENST00000539303 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-210ENST00000539303 SENP3Q9H4L4 574 aaPredicted RBP11.65□□□□□ -0.54
SNHG1-210ENST00000539303 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
SNHG1-210ENST00000539303 FOXD1Q16676 465 aa10.79□□□□□ -0.68
SNHG1-210ENST00000539303 ADRA2BP18089 450 aa10.67□□□□□ -0.7
SNHG1-210ENST00000539303 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
SNHG1-210ENST00000539303 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-210ENST00000539303 KCNA4P22459 653 aa10.16□□□□□ -0.78
SNHG1-210ENST00000539303 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
SNHG1-210ENST00000539303 MSH5O43196 834 aa9.92□□□□□ -0.82
SNHG1-210ENST00000539303 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
SNHG1-210ENST00000539303 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
SNHG1-210ENST00000539303 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
SNHG1-210ENST00000539303 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
SNHG1-210ENST00000539303 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-210ENST00000539303 CNKSR2Q8WXI2 1034 aa9.59□□□□□ -0.87
SNHG1-210ENST00000539303 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
SNHG1-210ENST00000539303 CSRNP3Q8WYN3 585 aa9.55□□□□□ -0.88
SNHG1-210ENST00000539303 ZBTB22O15209 634 aa9.4□□□□□ -0.9
SNHG1-210ENST00000539303 DMRT2Q9Y5R5 561 aa9.34□□□□□ -0.91
SNHG1-210ENST00000539303 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-210ENST00000539303 DNAJC5BQ9UF47 199 aa9.25□□□□□ -0.93
SNHG1-210ENST00000539303 HOXD11P31277 338 aaPredicted RBP9.23□□□□□ -0.93
SNHG1-210ENST00000539303 FOXD4L1Q9NU39 408 aa9.19□□□□□ -0.94
SNHG1-210ENST00000539303 SLC4A2P04920 1241 aa9.1□□□□□ -0.95
SNHG1-210ENST00000539303 DCAF8L1A6NGE4 600 aa8.92□□□□□ -0.98
SNHG1-210ENST00000539303 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-210ENST00000539303 POTEDQ86YR6 584 aa8.82□□□□□ -1
SNHG1-210ENST00000539303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -1
SNHG1-210ENST00000539303 ATXN8OSP0DMR3 200 aa8.76□□□□□ -1.01
SNHG1-210ENST00000539303 ATF5Q9Y2D1 282 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-210ENST00000539303 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-210ENST00000539303 FKBP8Q14318 412 aa8.6□□□□□ -1.03
SNHG1-210ENST00000539303 SAMD1Q6SPF0 538 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-210ENST00000539303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-210ENST00000539303 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
SNHG1-210ENST00000539303 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
SNHG1-210ENST00000539303 ZNF219Q9P2Y4 722 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-210ENST00000539303 SPINK5Q9NQ38 1064 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-210ENST00000539303 C1QBPQ07021 282 aaKnown RBP8.43□□□□□ -1.06
SNHG1-210ENST00000539303 APLP2Q06481 763 aa8.42□□□□□ -1.06
SNHG1-210ENST00000539303 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
SNHG1-210ENST00000539303 TRHP20396 242 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-210ENST00000539303 MKRN4PQ13434 485 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-210ENST00000539303 CAPN15O75808 1086 aa8.33□□□□□ -1.08
SNHG1-210ENST00000539303 POLA2Q14181 598 aa8.31□□□□□ -1.08
SNHG1-210ENST00000539303 AMER1Q5JTC6 1135 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-210ENST00000539303 ABCB7O75027 752 aa8.26□□□□□ -1.09
SNHG1-210ENST00000539303 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
SNHG1-210ENST00000539303 FBLN2P98095 1184 aa8.2□□□□□ -1.1
SNHG1-210ENST00000539303 PROM2Q8N271 834 aa8.15□□□□□ -1.1
SNHG1-210ENST00000539303 CACNB1Q02641 598 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-210ENST00000539303 DSG3P32926 999 aa8.13□□□□□ -1.11
SNHG1-210ENST00000539303 FBXO3Q9UK99 471 aa8.08□□□□□ -1.12
SNHG1-210ENST00000539303 ZBTB12Q9Y330 459 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-210ENST00000539303 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-210ENST00000539303 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
SNHG1-210ENST00000539303 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
SNHG1-210ENST00000539303 IFNLR1Q8IU57 520 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-210ENST00000539303 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-210ENST00000539303 SSUH2Q9Y2M2 353 aa7.94□□□□□ -1.14
SNHG1-210ENST00000539303 SPDYE2BA6NHP3 402 aa7.92□□□□□ -1.14
SNHG1-210ENST00000539303 SPDYE6P0CI01 402 aa7.92□□□□□ -1.14
SNHG1-210ENST00000539303 SPDYE2Q495Y8 402 aa7.92□□□□□ -1.14
SNHG1-210ENST00000539303 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
SNHG1-210ENST00000539303 PKD2Q13563 968 aa7.87□□□□□ -1.15
SNHG1-210ENST00000539303 KLHL34Q8N239 644 aa7.82□□□□□ -1.16
SNHG1-210ENST00000539303 STAG3Q9UJ98 1225 aa7.8□□□□□ -1.16
SNHG1-210ENST00000539303 DCAF8L2P0C7V8 631 aa7.79□□□□□ -1.16
SNHG1-210ENST00000539303 PLCD3Q8N3E9 789 aa7.79□□□□□ -1.16
SNHG1-210ENST00000539303 SPOCK2Q92563 424 aa7.79□□□□□ -1.16
SNHG1-210ENST00000539303 MIER1Q8N108 512 aa7.78□□□□□ -1.16
SNHG1-210ENST00000539303 RBM42Q9BTD8 480 aaKnown RBP7.75□□□□□ -1.17
SNHG1-210ENST00000539303 ECM2O94769 699 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-210ENST00000539303 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
SNHG1-210ENST00000539303 RGL2O15211 777 aa7.68□□□□□ -1.18
SNHG1-210ENST00000539303 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
SNHG1-210ENST00000539303 NPM1P06748 294 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNHG1-210ENST00000539303 CIZ1Q9ULV3 898 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-210ENST00000539303 CLEC11AQ9Y240 323 aa7.64□□□□□ -1.19
SNHG1-210ENST00000539303 PLEKHG5O94827 1062 aa7.62□□□□□ -1.19
SNHG1-210ENST00000539303 HAP1P54257 671 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-210ENST00000539303 REM2Q8IYK8 340 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-210ENST00000539303 SPDYE1Q8NFV5 336 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-210ENST00000539303 CREBZFQ9NS37 354 aa7.6□□□□□ -1.19
SNHG1-210ENST00000539303 ZBTB47Q9UFB7 747 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-210ENST00000539303 NUBP1P53384 320 aa7.58□□□□□ -1.2
SNHG1-210ENST00000539303 PRR29P0C7W0 189 aa7.57□□□□□ -1.2
SNHG1-210ENST00000539303 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-210ENST00000539303 RNF25Q96BH1 459 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-210ENST00000539303 PITPNM1O00562 1244 aa7.55□□□□□ -1.2
SNHG1-210ENST00000539303 BBXQ8WY36 941 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-210ENST00000539303 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-210ENST00000539303 CHGAP10645 457 aaKnown RBP7.53□□□□□ -1.2
SNHG1-210ENST00000539303 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
SNHG1-210ENST00000539303 DCAF8Q5TAQ9 597 aa7.52□□□□□ -1.21
SNHG1-210ENST00000539303 RASEFQ8IZ41 740 aa7.52□□□□□ -1.21
SNHG1-210ENST00000539303 GSE1Q14687 1217 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms