RNA–Protein interactions for RNA: ENST00000570047.2

PHKB-217, Transcript of phosphorylase kinase regulatory subunit beta, humanhuman

TSL 3

Gene PHKB, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKB-217ENST00000570047 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
PHKB-217ENST00000570047 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.04
PHKB-217ENST00000570047 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
PHKB-217ENST00000570047 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
PHKB-217ENST00000570047 ABCC9O60706 1549 aa20.33■□□□□ 0.85
PHKB-217ENST00000570047 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
PHKB-217ENST00000570047 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
PHKB-217ENST00000570047 NACADO15069 1562 aa20.11■□□□□ 0.81
PHKB-217ENST00000570047 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
PHKB-217ENST00000570047 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
PHKB-217ENST00000570047 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
PHKB-217ENST00000570047 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
PHKB-217ENST00000570047 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
PHKB-217ENST00000570047 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
PHKB-217ENST00000570047 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
PHKB-217ENST00000570047 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
PHKB-217ENST00000570047 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
PHKB-217ENST00000570047 BAZ1AQ9NRL2 1556 aaPredicted RBP19.07■□□□□ 0.64
PHKB-217ENST00000570047 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
PHKB-217ENST00000570047 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
PHKB-217ENST00000570047 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
PHKB-217ENST00000570047 WIZO95785 1651 aa18.83■□□□□ 0.61
PHKB-217ENST00000570047 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
PHKB-217ENST00000570047 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
PHKB-217ENST00000570047 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
PHKB-217ENST00000570047 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
PHKB-217ENST00000570047 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
PHKB-217ENST00000570047 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
PHKB-217ENST00000570047 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
PHKB-217ENST00000570047 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
PHKB-217ENST00000570047 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
PHKB-217ENST00000570047 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
PHKB-217ENST00000570047 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
PHKB-217ENST00000570047 CFTRP13569 1480 aa18.13■□□□□ 0.49
PHKB-217ENST00000570047 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
PHKB-217ENST00000570047 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
PHKB-217ENST00000570047 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
PHKB-217ENST00000570047 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
PHKB-217ENST00000570047 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
PHKB-217ENST00000570047 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
PHKB-217ENST00000570047 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
PHKB-217ENST00000570047 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
PHKB-217ENST00000570047 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
PHKB-217ENST00000570047 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
PHKB-217ENST00000570047 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
PHKB-217ENST00000570047 NESP48681 1621 aa17.83■□□□□ 0.45
PHKB-217ENST00000570047 CUX1P39880 1505 aa17.82■□□□□ 0.44
PHKB-217ENST00000570047 EEA1Q15075 1411 aa17.78■□□□□ 0.44
PHKB-217ENST00000570047 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
PHKB-217ENST00000570047 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
PHKB-217ENST00000570047 SOGA1O94964 1423 aa17.72■□□□□ 0.43
PHKB-217ENST00000570047 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
PHKB-217ENST00000570047 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
PHKB-217ENST00000570047 TOPBP1Q92547 1522 aa17.64■□□□□ 0.41
PHKB-217ENST00000570047 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
PHKB-217ENST00000570047 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
PHKB-217ENST00000570047 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
PHKB-217ENST00000570047 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
PHKB-217ENST00000570047 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
PHKB-217ENST00000570047 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
PHKB-217ENST00000570047 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
PHKB-217ENST00000570047 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
PHKB-217ENST00000570047 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
PHKB-217ENST00000570047 KIF21BO75037 1637 aa17.51■□□□□ 0.39
PHKB-217ENST00000570047 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
PHKB-217ENST00000570047 CUX2O14529 1486 aa17.5■□□□□ 0.39
PHKB-217ENST00000570047 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
PHKB-217ENST00000570047 WDR62O43379 1518 aa17.47■□□□□ 0.39
PHKB-217ENST00000570047 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
PHKB-217ENST00000570047 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
PHKB-217ENST00000570047 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
PHKB-217ENST00000570047 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
PHKB-217ENST00000570047 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
PHKB-217ENST00000570047 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
PHKB-217ENST00000570047 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
PHKB-217ENST00000570047 IGF1RP08069 1367 aa17.39■□□□□ 0.37
PHKB-217ENST00000570047 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
PHKB-217ENST00000570047 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
PHKB-217ENST00000570047 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
PHKB-217ENST00000570047 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
PHKB-217ENST00000570047 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
PHKB-217ENST00000570047 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
PHKB-217ENST00000570047 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PHKB-217ENST00000570047 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PHKB-217ENST00000570047 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
PHKB-217ENST00000570047 CUL7Q14999 1698 aa17.29■□□□□ 0.36
PHKB-217ENST00000570047 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
PHKB-217ENST00000570047 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
PHKB-217ENST00000570047 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
PHKB-217ENST00000570047 CLIP1P30622 1438 aa17.18■□□□□ 0.34
PHKB-217ENST00000570047 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■□□□□ 9
PHKB-217ENST00000570047 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
PHKB-217ENST00000570047 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
PHKB-217ENST00000570047 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
PHKB-217ENST00000570047 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
PHKB-217ENST00000570047 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PHKB-217ENST00000570047 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
PHKB-217ENST00000570047 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
PHKB-217ENST00000570047 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
PHKB-217ENST00000570047 ARHGAP35Q9NRY4 1499 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms