RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
SEC13-202ENST00000350697 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
SEC13-202ENST00000350697 ABCC9O60706 1549 aa28.74■■■□□ 2.19
SEC13-202ENST00000350697 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
SEC13-202ENST00000350697 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
SEC13-202ENST00000350697 NACADO15069 1562 aa27.8■■■□□ 2.04
SEC13-202ENST00000350697 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
SEC13-202ENST00000350697 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
SEC13-202ENST00000350697 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
SEC13-202ENST00000350697 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
SEC13-202ENST00000350697 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
SEC13-202ENST00000350697 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
SEC13-202ENST00000350697 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
SEC13-202ENST00000350697 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
SEC13-202ENST00000350697 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
SEC13-202ENST00000350697 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
SEC13-202ENST00000350697 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
SEC13-202ENST00000350697 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
SEC13-202ENST00000350697 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
SEC13-202ENST00000350697 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
SEC13-202ENST00000350697 MROH2BQ7Z745 1585 aa25.76■■□□□ 1.71
SEC13-202ENST00000350697 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
SEC13-202ENST00000350697 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
SEC13-202ENST00000350697 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
SEC13-202ENST00000350697 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.7
SEC13-202ENST00000350697 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
SEC13-202ENST00000350697 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
SEC13-202ENST00000350697 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
SEC13-202ENST00000350697 WIZO95785 1651 aa25.49■■□□□ 1.67
SEC13-202ENST00000350697 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
SEC13-202ENST00000350697 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
SEC13-202ENST00000350697 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
SEC13-202ENST00000350697 NESP48681 1621 aa24.94■■□□□ 1.58
SEC13-202ENST00000350697 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
SEC13-202ENST00000350697 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
SEC13-202ENST00000350697 CFTRP13569 1480 aa24.81■■□□□ 1.56
SEC13-202ENST00000350697 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
SEC13-202ENST00000350697 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
SEC13-202ENST00000350697 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
SEC13-202ENST00000350697 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
SEC13-202ENST00000350697 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
SEC13-202ENST00000350697 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
SEC13-202ENST00000350697 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
SEC13-202ENST00000350697 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
SEC13-202ENST00000350697 CUX2O14529 1486 aa24.42■■□□□ 1.5
SEC13-202ENST00000350697 WDR62O43379 1518 aa24.39■■□□□ 1.5
SEC13-202ENST00000350697 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
SEC13-202ENST00000350697 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
SEC13-202ENST00000350697 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
SEC13-202ENST00000350697 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
SEC13-202ENST00000350697 CUX1P39880 1505 aa24.15■■□□□ 1.46
SEC13-202ENST00000350697 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
SEC13-202ENST00000350697 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
SEC13-202ENST00000350697 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
SEC13-202ENST00000350697 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
SEC13-202ENST00000350697 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
SEC13-202ENST00000350697 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
SEC13-202ENST00000350697 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
SEC13-202ENST00000350697 SOGA1O94964 1423 aa23.98■■□□□ 1.43
SEC13-202ENST00000350697 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
SEC13-202ENST00000350697 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
SEC13-202ENST00000350697 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
SEC13-202ENST00000350697 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.4
SEC13-202ENST00000350697 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
SEC13-202ENST00000350697 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
SEC13-202ENST00000350697 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.42e-7■■■■□ 26.2
SEC13-202ENST00000350697 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
SEC13-202ENST00000350697 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
SEC13-202ENST00000350697 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
SEC13-202ENST00000350697 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
SEC13-202ENST00000350697 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
SEC13-202ENST00000350697 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
SEC13-202ENST00000350697 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
SEC13-202ENST00000350697 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
SEC13-202ENST00000350697 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
SEC13-202ENST00000350697 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
SEC13-202ENST00000350697 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
SEC13-202ENST00000350697 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
SEC13-202ENST00000350697 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
SEC13-202ENST00000350697 FBLN2P98095 1184 aa23.48■■□□□ 1.35
SEC13-202ENST00000350697 CHD1O14646 1710 aa23.48■■□□□ 1.35
SEC13-202ENST00000350697 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
SEC13-202ENST00000350697 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
SEC13-202ENST00000350697 ADAMTS12P58397 1594 aa23.45■■□□□ 1.35
SEC13-202ENST00000350697 IGF1RP08069 1367 aa23.45■■□□□ 1.34
SEC13-202ENST00000350697 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
SEC13-202ENST00000350697 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
SEC13-202ENST00000350697 CUL7Q14999 1698 aa23.38■■□□□ 1.33
SEC13-202ENST00000350697 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SEC13-202ENST00000350697 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
SEC13-202ENST00000350697 EEA1Q15075 1411 aa23.3■■□□□ 1.32
SEC13-202ENST00000350697 NUP160Q12769 1436 aa23.25■■□□□ 1.31
SEC13-202ENST00000350697 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
SEC13-202ENST00000350697 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
SEC13-202ENST00000350697 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
SEC13-202ENST00000350697 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
SEC13-202ENST00000350697 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
SEC13-202ENST00000350697 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
SEC13-202ENST00000350697 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
SEC13-202ENST00000350697 ARHGEF11O15085 1522 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms