Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
LNX1Q8TBB1 AC005559.1-201ENST00000589661 871 ntBASIC29.14■■■□□ 2.26
LNX1Q8TBB1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.14■■■□□ 2.26
LNX1Q8TBB1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
LNX1Q8TBB1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.13■■■□□ 2.25
LNX1Q8TBB1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
LNX1Q8TBB1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
LNX1Q8TBB1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
LNX1Q8TBB1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
LNX1Q8TBB1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
LNX1Q8TBB1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
LNX1Q8TBB1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
LNX1Q8TBB1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
LNX1Q8TBB1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
LNX1Q8TBB1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
LNX1Q8TBB1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.05■■■□□ 2.24
LNX1Q8TBB1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.05■■■□□ 2.24
LNX1Q8TBB1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
LNX1Q8TBB1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.02■■■□□ 2.24
LNX1Q8TBB1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
LNX1Q8TBB1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.02■■■□□ 2.24
LNX1Q8TBB1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.01■■■□□ 2.23
LNX1Q8TBB1 AC044849.2-201ENST00000606596 710 ntBASIC29■■■□□ 2.23
LNX1Q8TBB1 ABCB10P1-201ENST00000614297 2181 ntBASIC29■■■□□ 2.23
LNX1Q8TBB1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.98■■■□□ 2.23
LNX1Q8TBB1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
LNX1Q8TBB1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.96■■■□□ 2.23
LNX1Q8TBB1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
LNX1Q8TBB1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
LNX1Q8TBB1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
LNX1Q8TBB1 ABHD17AP4-201ENST00000411545 909 ntBASIC28.95■■■□□ 2.22
LNX1Q8TBB1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
LNX1Q8TBB1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
LNX1Q8TBB1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
LNX1Q8TBB1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.93■■■□□ 2.22
LNX1Q8TBB1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
LNX1Q8TBB1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
LNX1Q8TBB1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LNX1Q8TBB1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LNX1Q8TBB1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
LNX1Q8TBB1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.89■■■□□ 2.22
LNX1Q8TBB1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
LNX1Q8TBB1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.89■■■□□ 2.21
LNX1Q8TBB1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.88■■■□□ 2.21
LNX1Q8TBB1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
LNX1Q8TBB1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.87■■■□□ 2.21
LNX1Q8TBB1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
LNX1Q8TBB1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
LNX1Q8TBB1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
LNX1Q8TBB1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LNX1Q8TBB1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LNX1Q8TBB1 AL161658.1-201ENST00000623641 1967 ntBASIC28.84■■■□□ 2.21
LNX1Q8TBB1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
LNX1Q8TBB1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
LNX1Q8TBB1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LNX1Q8TBB1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
LNX1Q8TBB1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LNX1Q8TBB1 MIR7108-201ENST00000614319 87 ntBASIC28.82■■■□□ 2.2
LNX1Q8TBB1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
LNX1Q8TBB1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LNX1Q8TBB1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
LNX1Q8TBB1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LNX1Q8TBB1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.8■■■□□ 2.2
LNX1Q8TBB1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
LNX1Q8TBB1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LNX1Q8TBB1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
LNX1Q8TBB1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LNX1Q8TBB1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.78■■■□□ 2.2
LNX1Q8TBB1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LNX1Q8TBB1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
LNX1Q8TBB1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
LNX1Q8TBB1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
LNX1Q8TBB1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
LNX1Q8TBB1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LNX1Q8TBB1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LNX1Q8TBB1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
LNX1Q8TBB1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
LNX1Q8TBB1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.72■■■□□ 2.19
LNX1Q8TBB1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LNX1Q8TBB1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
LNX1Q8TBB1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
LNX1Q8TBB1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
LNX1Q8TBB1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LNX1Q8TBB1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms