Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 UBE2I-216ENST00000567383 538 ntTSL 415.13■□□□□ 0.015e-6■■■□□ 16.9
LSM11P83369 UBE2I-210ENST00000562482 735 ntTSL 214.23□□□□□ -0.135e-6■■■□□ 16.9
LSM11P83369 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.182e-8■■■□□ 16.9
LSM11P83369 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.185e-6■■■□□ 16.9
LSM11P83369 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.285e-6■■■□□ 16.9
LSM11P83369 ALDH16A1-207ENST00000599652 3995 ntTSL 213.3□□□□□ -0.282e-8■■■□□ 16.9
LSM11P83369 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.325e-6■■■□□ 16.9
LSM11P83369 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.385e-6■■■□□ 16.9
LSM11P83369 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.442e-7■■■□□ 16.9
LSM11P83369 U1.30-201ENST00000622285 165 ntBASIC9□□□□□ -0.972e-8■■■□□ 16.9
LSM11P83369 TCIRG1-203ENST00000524870 830 ntTSL 1 (best)18.6■□□□□ 0.573e-8■■■□□ 16.9
LSM11P83369 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.192e-6■■■□□ 16.9
LSM11P83369 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.192e-6■■■□□ 16.9
LSM11P83369 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.112e-6■■■□□ 16.9
LSM11P83369 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-6■■■□□ 16.9
LSM11P83369 DDX56-205ENST00000433257 1682 ntTSL 513.69□□□□□ -0.222e-6■■■□□ 16.9
LSM11P83369 DDX56-208ENST00000467318 1665 ntTSL 513.21□□□□□ -0.32e-6■■■□□ 16.9
LSM11P83369 DDX56-212ENST00000485367 1781 ntTSL 59.48□□□□□ -0.892e-6■■■□□ 16.9
LSM11P83369 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.07■■□□□ 1.62e-9■■■□□ 16.9
LSM11P83369 FTCD-212ENST00000498355 1936 ntTSL 224.67■■□□□ 1.542e-9■■■□□ 16.9
LSM11P83369 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.382e-9■■■□□ 16.9
LSM11P83369 FTCD-206ENST00000460011 1260 ntTSL 1 (best)16.64■□□□□ 0.252e-9■■■□□ 16.9
LSM11P83369 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.79□□□□□ -0.521e-6■■■□□ 16.9
LSM11P83369 DRD4-202ENST00000528733 361 ntTSL 313.58□□□□□ -0.242e-10■■■□□ 16.9
LSM11P83369 MICALL2-208ENST00000472100 5248 ntTSL 216.09■□□□□ 0.175e-9■■■□□ 16.8
LSM11P83369 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.15e-9■■■□□ 16.8
LSM11P83369 ATXN2L-221ENST00000566946 2162 ntTSL 1 (best)18.95■□□□□ 0.621e-12■■■□□ 16.8
LSM11P83369 ATXN2L-208ENST00000562583 1933 ntTSL 1 (best)16.29■□□□□ 0.21e-12■■■□□ 16.8
LSM11P83369 ATXN2L-213ENST00000564162 770 ntTSL 515.38■□□□□ 0.051e-12■■■□□ 16.8
LSM11P83369 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)14.09□□□□□ -0.151e-12■■■□□ 16.8
LSM11P83369 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.211e-12■■■□□ 16.8
LSM11P83369 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.231e-12■■■□□ 16.8
LSM11P83369 ATXN2L-211ENST00000563314 4574 ntTSL 513.34□□□□□ -0.271e-12■■■□□ 16.8
LSM11P83369 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.41e-12■■■□□ 16.8
LSM11P83369 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.41e-12■■■□□ 16.8
LSM11P83369 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.451e-12■■■□□ 16.8
LSM11P83369 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.521e-12■■■□□ 16.8
LSM11P83369 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.84□□□□□ -0.675e-6■■■□□ 16.8
LSM11P83369 CUX1-210ENST00000497815 947 ntTSL 210.67□□□□□ -0.75e-6■■■□□ 16.8
LSM11P83369 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.52□□□□□ -0.735e-6■■■□□ 16.8
LSM11P83369 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.28□□□□□ -0.765e-6■■■□□ 16.8
LSM11P83369 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.06□□□□□ -0.85e-6■■■□□ 16.8
LSM11P83369 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.06□□□□□ -0.85e-6■■■□□ 16.8
LSM11P83369 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.03□□□□□ -0.965e-6■■■□□ 16.8
LSM11P83369 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.035e-6■■■□□ 16.8
LSM11P83369 LINC01089-206ENST00000537157 479 ntTSL 220.05■□□□□ 0.87e-10■■■□□ 16.8
LSM11P83369 RHOF-207ENST00000546227 1219 ntTSL 519.53■□□□□ 0.724e-10■■■□□ 16.7
LSM11P83369 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.171e-7■■■□□ 16.7
LSM11P83369 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.77□□□□□ -0.211e-7■■■□□ 16.7
LSM11P83369 SFXN3-205ENST00000470252 2541 ntTSL 212.45□□□□□ -0.421e-7■■■□□ 16.7
LSM11P83369 CHTF18-213ENST00000498439 673 ntTSL 215.99■□□□□ 0.155e-11■■■□□ 16.7
LSM11P83369 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.112e-7■■■□□ 16.7
LSM11P83369 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.012e-7■■■□□ 16.7
LSM11P83369 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.062e-7■■■□□ 16.7
LSM11P83369 CHTF18-207ENST00000464728 4088 ntTSL 213.23□□□□□ -0.292e-7■■■□□ 16.7
LSM11P83369 CHTF18-208ENST00000471202 4494 ntTSL 213.17□□□□□ -0.32e-7■■■□□ 16.7
LSM11P83369 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.42e-7■■■□□ 16.7
LSM11P83369 ACADVL-222ENST00000579894 429 ntTSL 212.09□□□□□ -0.472e-6■■■□□ 16.7
LSM11P83369 TTC3-223ENST00000492275 769 ntTSL 322.78■■□□□ 1.242e-18■■■□□ 16.7
LSM11P83369 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.72■■□□□ 1.232e-18■■■□□ 16.7
LSM11P83369 ANKRD28-203ENST00000439830 592 ntTSL 521.87■■□□□ 1.092e-18■■■□□ 16.7
LSM11P83369 TTC3-210ENST00000450533 2451 ntTSL 1 (best)20.99■□□□□ 0.952e-18■■■□□ 16.7
LSM11P83369 TTC3-212ENST00000463216 842 ntTSL 520.96■□□□□ 0.952e-18■■■□□ 16.7
LSM11P83369 TTC3-224ENST00000494243 861 ntTSL 520.78■□□□□ 0.922e-18■■■□□ 16.7
LSM11P83369 TTC3-217ENST00000481605 1540 ntTSL 520.32■□□□□ 0.842e-18■■■□□ 16.7
LSM11P83369 TTC3-209ENST00000438055 3606 ntTSL 515.85■□□□□ 0.132e-18■■■□□ 16.7
LSM11P83369 TTC3-207ENST00000418766 3771 ntTSL 515.53■□□□□ 0.082e-18■■■□□ 16.7
LSM11P83369 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.131e-7■■■□□ 16.7
LSM11P83369 TTC3-219ENST00000485402 3626 ntTSL 514.05□□□□□ -0.162e-18■■■□□ 16.7
LSM11P83369 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC9.1□□□□□ -0.958e-10■■■□□ 16.7
LSM11P83369 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.972e-18■■■□□ 16.7
LSM11P83369 TTC3-216ENST00000479930 8998 ntTSL 1 (best)8.24□□□□□ -1.092e-18■■■□□ 16.7
LSM11P83369 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.492e-18■■■□□ 16.7
LSM11P83369 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.682e-18■■■□□ 16.7
LSM11P83369 FASTK-213ENST00000482806 1826 ntTSL 520.75■□□□□ 0.912e-8■■■□□ 16.7
LSM11P83369 FASTK-215ENST00000489884 1751 ntTSL 1 (best)19.97■□□□□ 0.792e-8■■■□□ 16.7
LSM11P83369 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.79■□□□□ 0.762e-8■■■□□ 16.7
LSM11P83369 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-8■■■□□ 16.7
LSM11P83369 FASTK-207ENST00000466855 1894 ntTSL 518.67■□□□□ 0.582e-8■■■□□ 16.7
LSM11P83369 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.43■□□□□ 0.542e-8■■■□□ 16.7
LSM11P83369 FASTK-206ENST00000465272 457 ntTSL 217.1■□□□□ 0.332e-8■■■□□ 16.7
LSM11P83369 FASTK-209ENST00000469237 1904 ntTSL 516.96■□□□□ 0.32e-8■■■□□ 16.7
LSM11P83369 FASTK-214ENST00000483953 1178 ntTSL 516.51■□□□□ 0.232e-8■■■□□ 16.7
LSM11P83369 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.3■□□□□ 0.22e-8■■■□□ 16.7
LSM11P83369 FASTK-203ENST00000459800 449 ntTSL 215.53■□□□□ 0.082e-8■■■□□ 16.7
LSM11P83369 FASTK-204ENST00000460980 1521 ntTSL 514.14□□□□□ -0.152e-8■■■□□ 16.7
LSM11P83369 FASTK-208ENST00000467237 3011 ntTSL 1 (best)13.99□□□□□ -0.172e-8■■■□□ 16.7
LSM11P83369 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.04□□□□□ -0.482e-8■■■□□ 16.7
LSM11P83369 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.61■□□□□ 0.731e-6■■■□□ 16.7
LSM11P83369 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.52■□□□□ 0.563e-7■■■□□ 16.7
LSM11P83369 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.65□□□□□ -0.063e-7■■■□□ 16.7
LSM11P83369 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.173e-7■■■□□ 16.7
LSM11P83369 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.93□□□□□ -0.343e-7■■■□□ 16.7
LSM11P83369 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.11□□□□□ -0.633e-7■■■□□ 16.7
LSM11P83369 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC9.72□□□□□ -0.853e-7■■■□□ 16.7
LSM11P83369 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.11□□□□□ -0.953e-7■■■□□ 16.7
LSM11P83369 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.973e-7■■■□□ 16.7
LSM11P83369 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.073e-7■■■□□ 16.7
LSM11P83369 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.61□□□□□ -1.193e-7■■■□□ 16.7
LSM11P83369 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.23e-7■■■□□ 16.7
Retrieved 100 of 11,495 protein–RNA pairs in 55.8 ms