RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
NEDD4L-208ENST00000456173 MYT1Q01538 1121 aa19.95■□□□□ 0.78
NEDD4L-208ENST00000456173 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
NEDD4L-208ENST00000456173 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
NEDD4L-208ENST00000456173 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
NEDD4L-208ENST00000456173 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
NEDD4L-208ENST00000456173 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
NEDD4L-208ENST00000456173 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
NEDD4L-208ENST00000456173 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
NEDD4L-208ENST00000456173 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
NEDD4L-208ENST00000456173 HRCP23327 699 aa19.18■□□□□ 0.66
NEDD4L-208ENST00000456173 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
NEDD4L-208ENST00000456173 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.65
NEDD4L-208ENST00000456173 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
NEDD4L-208ENST00000456173 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-208ENST00000456173 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
NEDD4L-208ENST00000456173 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
NEDD4L-208ENST00000456173 NEFLP07196 543 aa18.66■□□□□ 0.58
NEDD4L-208ENST00000456173 APLP2Q06481 763 aa18.57■□□□□ 0.56
NEDD4L-208ENST00000456173 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
NEDD4L-208ENST00000456173 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
NEDD4L-208ENST00000456173 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
NEDD4L-208ENST00000456173 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
NEDD4L-208ENST00000456173 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
NEDD4L-208ENST00000456173 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
NEDD4L-208ENST00000456173 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
NEDD4L-208ENST00000456173 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
NEDD4L-208ENST00000456173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
NEDD4L-208ENST00000456173 BCANQ96GW7 911 aa18.08■□□□□ 0.48
NEDD4L-208ENST00000456173 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
NEDD4L-208ENST00000456173 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
NEDD4L-208ENST00000456173 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
NEDD4L-208ENST00000456173 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
NEDD4L-208ENST00000456173 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
NEDD4L-208ENST00000456173 EIF5BO60841 1220 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-208ENST00000456173 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
NEDD4L-208ENST00000456173 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
NEDD4L-208ENST00000456173 ZNF316A6NFI3 1004 aaPredicted RBP17.69■□□□□ 0.42
NEDD4L-208ENST00000456173 ATP1B4Q9UN42 357 aaPredicted RBP17.69■□□□□ 0.42
NEDD4L-208ENST00000456173 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
NEDD4L-208ENST00000456173 ITGAEP38570 1179 aa17.62■□□□□ 0.41
NEDD4L-208ENST00000456173 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
NEDD4L-208ENST00000456173 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
NEDD4L-208ENST00000456173 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
NEDD4L-208ENST00000456173 FKBP8Q14318 412 aa17.47■□□□□ 0.39
NEDD4L-208ENST00000456173 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
NEDD4L-208ENST00000456173 NBR1Q14596 966 aa17.44■□□□□ 0.38
NEDD4L-208ENST00000456173 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
NEDD4L-208ENST00000456173 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
NEDD4L-208ENST00000456173 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
NEDD4L-208ENST00000456173 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-208ENST00000456173 ANP32CO43423 234 aa17.31■□□□□ 0.36
NEDD4L-208ENST00000456173 ABCC9O60706 1549 aa17.29■□□□□ 0.36
NEDD4L-208ENST00000456173 MIER1Q8N108 512 aa17.21■□□□□ 0.35
NEDD4L-208ENST00000456173 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
NEDD4L-208ENST00000456173 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
NEDD4L-208ENST00000456173 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
NEDD4L-208ENST00000456173 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
NEDD4L-208ENST00000456173 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
NEDD4L-208ENST00000456173 ARXQ96QS3 562 aa17.04■□□□□ 0.32
NEDD4L-208ENST00000456173 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-208ENST00000456173 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
NEDD4L-208ENST00000456173 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.318e-9■■□□□ 13.9
NEDD4L-208ENST00000456173 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-208ENST00000456173 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-208ENST00000456173 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
NEDD4L-208ENST00000456173 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
NEDD4L-208ENST00000456173 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.3
NEDD4L-208ENST00000456173 ANP32BQ92688 251 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-208ENST00000456173 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
NEDD4L-208ENST00000456173 NEFMP07197 916 aa16.85■□□□□ 0.29
NEDD4L-208ENST00000456173 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
NEDD4L-208ENST00000456173 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
NEDD4L-208ENST00000456173 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
NEDD4L-208ENST00000456173 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
NEDD4L-208ENST00000456173 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-208ENST00000456173 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
NEDD4L-208ENST00000456173 NOP58Q9Y2X3 529 aaKnown RBP16.75■□□□□ 0.27
NEDD4L-208ENST00000456173 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
NEDD4L-208ENST00000456173 NAP1L5Q96NT1 182 aaPredicted RBP16.75■□□□□ 0.27
NEDD4L-208ENST00000456173 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
NEDD4L-208ENST00000456173 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
NEDD4L-208ENST00000456173 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-208ENST00000456173 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-208ENST00000456173 UPF2Q9HAU5 1272 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-208ENST00000456173 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
NEDD4L-208ENST00000456173 TRIM44Q96DX7 344 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-208ENST00000456173 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-208ENST00000456173 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
NEDD4L-208ENST00000456173 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
NEDD4L-208ENST00000456173 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
NEDD4L-208ENST00000456173 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
NEDD4L-208ENST00000456173 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-208ENST00000456173 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.23
NEDD4L-208ENST00000456173 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
NEDD4L-208ENST00000456173 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
NEDD4L-208ENST00000456173 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-208ENST00000456173 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
NEDD4L-208ENST00000456173 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
NEDD4L-208ENST00000456173 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms