RNA–Protein interactions for RNA: ENST00000566946.5

ATXN2L-221, Transcript of ataxin 2 like, humanhuman

TSL 1 (best)

Gene ATXN2L, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2L-221ENST00000566946 NISCHQ9Y2I1 1504 aa45.64■■■■■ 4.9
ATXN2L-221ENST00000566946 CCDC180Q9P1Z9 1646 aa39.56■■■■□ 3.92
ATXN2L-221ENST00000566946 ZCCHC6Q5VYS8 1495 aaKnown RBP38.37■■■■□ 3.73
ATXN2L-221ENST00000566946 DCAF8L2P0C7V8 631 aa37.85■■■■□ 3.65
ATXN2L-221ENST00000566946 DCAF1Q9Y4B6 1507 aa37.65■■■■□ 3.62
ATXN2L-221ENST00000566946 SHROOM4Q9ULL8 1493 aa37.59■■■■□ 3.61
ATXN2L-221ENST00000566946 ABCC9O60706 1549 aa37.42■■■■□ 3.58
ATXN2L-221ENST00000566946 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
ATXN2L-221ENST00000566946 NACADO15069 1562 aa36.85■■■■□ 3.49
ATXN2L-221ENST00000566946 SCRIBQ14160 1630 aa36.58■■■■□ 3.45
ATXN2L-221ENST00000566946 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
ATXN2L-221ENST00000566946 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
ATXN2L-221ENST00000566946 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
ATXN2L-221ENST00000566946 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
ATXN2L-221ENST00000566946 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
ATXN2L-221ENST00000566946 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
ATXN2L-221ENST00000566946 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.261e-7■□□□□ 10.1
ATXN2L-221ENST00000566946 MROH2BQ7Z745 1585 aa35.32■■■■□ 3.24
ATXN2L-221ENST00000566946 BAZ1AQ9NRL2 1556 aaPredicted RBP35.2■■■■□ 3.23
ATXN2L-221ENST00000566946 WIZO95785 1651 aa35.03■■■■□ 3.2
ATXN2L-221ENST00000566946 SMARCA4P51532 1647 aa35.02■■■■□ 3.2
ATXN2L-221ENST00000566946 CHIC1Q5VXU3 224 aa34.8■■■■□ 3.16
ATXN2L-221ENST00000566946 TOP2AP11388 1531 aaKnown RBP34.61■■■■□ 3.13
ATXN2L-221ENST00000566946 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
ATXN2L-221ENST00000566946 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
ATXN2L-221ENST00000566946 EIF4G1Q04637 1599 aaKnown RBP34.35■■■■□ 3.09
ATXN2L-221ENST00000566946 SMARCA2P51531 1590 aa34.35■■■■□ 3.09
ATXN2L-221ENST00000566946 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
ATXN2L-221ENST00000566946 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
ATXN2L-221ENST00000566946 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
ATXN2L-221ENST00000566946 TRIM41Q8WV44 630 aa34.05■■■■□ 3.04
ATXN2L-221ENST00000566946 HMGXB3Q12766 1538 aa33.98■■■■□ 3.03
ATXN2L-221ENST00000566946 CC2D2AQ9P2K1 1620 aa33.8■■■■□ 3
ATXN2L-221ENST00000566946 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
ATXN2L-221ENST00000566946 LOC105371045A0A1W2PR82 267 aa33.56■■■□□ 2.96
ATXN2L-221ENST00000566946 FAM9AQ8IZU1 332 aaPredicted RBP33.52■■■□□ 2.96
ATXN2L-221ENST00000566946 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.94
ATXN2L-221ENST00000566946 CFTRP13569 1480 aa33.39■■■□□ 2.94
ATXN2L-221ENST00000566946 SYNJ1O43426 1573 aa33.28■■■□□ 2.92
ATXN2L-221ENST00000566946 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
ATXN2L-221ENST00000566946 SOGA1O94964 1423 aa33.16■■■□□ 2.9
ATXN2L-221ENST00000566946 EHMT2Q96KQ7 1210 aa33.11■■■□□ 2.89
ATXN2L-221ENST00000566946 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
ATXN2L-221ENST00000566946 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
ATXN2L-221ENST00000566946 DNAJC5BQ9UF47 199 aa33.07■■■□□ 2.88
ATXN2L-221ENST00000566946 RUSC2Q8N2Y8 1516 aa33.04■■■□□ 2.88
ATXN2L-221ENST00000566946 EEA1Q15075 1411 aa33.02■■■□□ 2.88
ATXN2L-221ENST00000566946 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
ATXN2L-221ENST00000566946 CUX1P39880 1505 aa32.99■■■□□ 2.87
ATXN2L-221ENST00000566946 NESP48681 1621 aa32.94■■■□□ 2.86
ATXN2L-221ENST00000566946 CSRNP3Q8WYN3 585 aa32.94■■■□□ 2.86
ATXN2L-221ENST00000566946 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
ATXN2L-221ENST00000566946 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.85
ATXN2L-221ENST00000566946 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
ATXN2L-221ENST00000566946 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
ATXN2L-221ENST00000566946 GOLGA3Q08378 1498 aa32.62■■■□□ 2.81
ATXN2L-221ENST00000566946 FGD5Q6ZNL6 1462 aa32.6■■■□□ 2.81
ATXN2L-221ENST00000566946 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
ATXN2L-221ENST00000566946 UBTFP17480 764 aaKnown RBP32.58■■■□□ 2.81
ATXN2L-221ENST00000566946 DNMBPQ6XZF7 1577 aa32.57■■■□□ 2.8
ATXN2L-221ENST00000566946 KIF21BO75037 1637 aa32.57■■■□□ 2.8
ATXN2L-221ENST00000566946 KIF27Q86VH2 1401 aa32.56■■■□□ 2.8
ATXN2L-221ENST00000566946 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
ATXN2L-221ENST00000566946 URB2Q14146 1524 aaKnown RBP32.46■■■□□ 2.79
ATXN2L-221ENST00000566946 CUX2O14529 1486 aa32.46■■■□□ 2.79
ATXN2L-221ENST00000566946 RAPGEF2Q9Y4G8 1499 aa32.45■■■□□ 2.79
ATXN2L-221ENST00000566946 CEP162Q5TB80 1403 aa32.45■■■□□ 2.78
ATXN2L-221ENST00000566946 KIF21AQ7Z4S6 1674 aa32.44■■■□□ 2.78
ATXN2L-221ENST00000566946 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
ATXN2L-221ENST00000566946 PRXQ9BXM0 1461 aa32.4■■■□□ 2.78
ATXN2L-221ENST00000566946 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
ATXN2L-221ENST00000566946 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
ATXN2L-221ENST00000566946 IGF1RP08069 1367 aa32.3■■■□□ 2.76
ATXN2L-221ENST00000566946 ABCA10Q8WWZ4 1543 aa32.28■■■□□ 2.76
ATXN2L-221ENST00000566946 PCGF6Q9BYE7 350 aa32.25■■■□□ 2.75
ATXN2L-221ENST00000566946 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
ATXN2L-221ENST00000566946 CLIP1P30622 1438 aa32.15■■■□□ 2.74
ATXN2L-221ENST00000566946 CARMIL1Q5VZK9 1371 aa32.13■■■□□ 2.73
ATXN2L-221ENST00000566946 TRIM26Q12899 539 aaPredicted RBP32.11■■■□□ 2.73
ATXN2L-221ENST00000566946 WDR97A6NE52 1622 aa32.1■■■□□ 2.73
ATXN2L-221ENST00000566946 RANGAP1P46060 587 aaPredicted RBP32.08■■■□□ 2.73
ATXN2L-221ENST00000566946 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
ATXN2L-221ENST00000566946 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
ATXN2L-221ENST00000566946 PPARGC1BQ86YN6 1023 aaKnown RBP32.01■■■□□ 2.72
ATXN2L-221ENST00000566946 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
ATXN2L-221ENST00000566946 WDR62O43379 1518 aa31.97■■■□□ 2.71
ATXN2L-221ENST00000566946 ABCA5Q8WWZ7 1642 aa31.97■■■□□ 2.71
ATXN2L-221ENST00000566946 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
ATXN2L-221ENST00000566946 CUL7Q14999 1698 aa31.9■■■□□ 2.7
ATXN2L-221ENST00000566946 VPS8Q8N3P4 1428 aa31.87■■■□□ 2.69
ATXN2L-221ENST00000566946 THOC2Q8NI27 1593 aaKnown RBP31.82■■■□□ 2.68
ATXN2L-221ENST00000566946 IFT140Q96RY7 1462 aa31.82■■■□□ 2.68
ATXN2L-221ENST00000566946 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.683e-12■■■■■ 38.1
ATXN2L-221ENST00000566946 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
ATXN2L-221ENST00000566946 ARHGAP35Q9NRY4 1499 aa31.75■■■□□ 2.67
ATXN2L-221ENST00000566946 TTBK1Q5TCY1 1321 aaPredicted RBP31.72■■■□□ 2.67
ATXN2L-221ENST00000566946 ZNF608Q9ULD9 1512 aaPredicted RBP31.71■■■□□ 2.67
ATXN2L-221ENST00000566946 PBRM1Q86U86 1689 aa31.68■■■□□ 2.66
ATXN2L-221ENST00000566946 GRIN2BQ13224 1484 aa31.65■■■□□ 2.66
ATXN2L-221ENST00000566946 APLP2Q06481 763 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms