RNA–Protein interactions for RNA: ENST00000394260.2

PRICKLE4-202, Transcript of prickle planar cell polarity protein 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRICKLE4, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4-202ENST00000394260 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
PRICKLE4-202ENST00000394260 CCDC180Q9P1Z9 1646 aa41.94■■■■■ 4.3
PRICKLE4-202ENST00000394260 ABCC9O60706 1549 aa41.36■■■■■ 4.21
PRICKLE4-202ENST00000394260 RB1CC1Q8TDY2 1594 aa39.69■■■■□ 3.94
PRICKLE4-202ENST00000394260 NACADO15069 1562 aa39.49■■■■□ 3.91
PRICKLE4-202ENST00000394260 MYO15BQ96JP2 1530 aa39.11■■■■□ 3.85
PRICKLE4-202ENST00000394260 DCAF8L2P0C7V8 631 aa38.98■■■■□ 3.83
PRICKLE4-202ENST00000394260 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
PRICKLE4-202ENST00000394260 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
PRICKLE4-202ENST00000394260 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
PRICKLE4-202ENST00000394260 BICRAQ9NZM4 1560 aa38.45■■■■□ 3.75
PRICKLE4-202ENST00000394260 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.741e-7■■■■■ 27.8
PRICKLE4-202ENST00000394260 DNAJC5BQ9UF47 199 aa38.42■■■■□ 3.74
PRICKLE4-202ENST00000394260 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
PRICKLE4-202ENST00000394260 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
PRICKLE4-202ENST00000394260 EIF4G1Q04637 1599 aaKnown RBP37.5■■■■□ 3.59
PRICKLE4-202ENST00000394260 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
PRICKLE4-202ENST00000394260 CECR2Q9BXF3 1484 aa37.29■■■■□ 3.56
PRICKLE4-202ENST00000394260 NCAPD3P42695 1498 aa36.38■■■■□ 3.41
PRICKLE4-202ENST00000394260 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
PRICKLE4-202ENST00000394260 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
PRICKLE4-202ENST00000394260 ATAD2BQ9ULI0 1458 aa36.27■■■■□ 3.4
PRICKLE4-202ENST00000394260 BAZ1AQ9NRL2 1556 aaPredicted RBP36.26■■■■□ 3.39
PRICKLE4-202ENST00000394260 HMGXB3Q12766 1538 aa36.23■■■■□ 3.39
PRICKLE4-202ENST00000394260 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
PRICKLE4-202ENST00000394260 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
PRICKLE4-202ENST00000394260 MROH2BQ7Z745 1585 aa35.89■■■■□ 3.34
PRICKLE4-202ENST00000394260 ERCC6Q03468 1493 aa35.76■■■■□ 3.32
PRICKLE4-202ENST00000394260 CUX2O14529 1486 aa35.7■■■■□ 3.31
PRICKLE4-202ENST00000394260 NESP48681 1621 aa35.61■■■■□ 3.29
PRICKLE4-202ENST00000394260 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
PRICKLE4-202ENST00000394260 WIZO95785 1651 aa35.51■■■■□ 3.28
PRICKLE4-202ENST00000394260 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
PRICKLE4-202ENST00000394260 KIF21AQ7Z4S6 1674 aa35.32■■■■□ 3.24
PRICKLE4-202ENST00000394260 PDS5BQ9NTI5 1447 aa35.3■■■■□ 3.24
PRICKLE4-202ENST00000394260 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
PRICKLE4-202ENST00000394260 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
PRICKLE4-202ENST00000394260 DNAJC5Q9H3Z4 198 aa35.2■■■■□ 3.23
PRICKLE4-202ENST00000394260 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
PRICKLE4-202ENST00000394260 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
PRICKLE4-202ENST00000394260 CFTRP13569 1480 aa34.94■■■■□ 3.18
PRICKLE4-202ENST00000394260 WDR62O43379 1518 aa34.93■■■■□ 3.18
PRICKLE4-202ENST00000394260 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
PRICKLE4-202ENST00000394260 FANCD2Q9BXW9 1451 aa34.85■■■■□ 3.17
PRICKLE4-202ENST00000394260 PRDM2Q13029 1718 aa34.84■■■■□ 3.17
PRICKLE4-202ENST00000394260 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
PRICKLE4-202ENST00000394260 URB2Q14146 1524 aaKnown RBP34.53■■■■□ 3.12
PRICKLE4-202ENST00000394260 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
PRICKLE4-202ENST00000394260 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
PRICKLE4-202ENST00000394260 IFT140Q96RY7 1462 aa34.2■■■■□ 3.07
PRICKLE4-202ENST00000394260 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
PRICKLE4-202ENST00000394260 ZNF608Q9ULD9 1512 aaPredicted RBP34.01■■■■□ 3.04
PRICKLE4-202ENST00000394260 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
PRICKLE4-202ENST00000394260 OSCARQ8IYS5 282 aa33.97■■■■□ 3.03
PRICKLE4-202ENST00000394260 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
PRICKLE4-202ENST00000394260 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
PRICKLE4-202ENST00000394260 WDR97A6NE52 1622 aa33.79■■■■□ 3
PRICKLE4-202ENST00000394260 CUX1P39880 1505 aa33.73■■■□□ 2.99
PRICKLE4-202ENST00000394260 AQRO60306 1485 aaKnown RBP eCLIP33.72■■■□□ 2.99
PRICKLE4-202ENST00000394260 FGD5Q6ZNL6 1462 aa33.71■■■□□ 2.99
PRICKLE4-202ENST00000394260 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
PRICKLE4-202ENST00000394260 SOGA1O94964 1423 aa33.7■■■□□ 2.99
PRICKLE4-202ENST00000394260 CHD1O14646 1710 aa33.7■■■□□ 2.98
PRICKLE4-202ENST00000394260 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
PRICKLE4-202ENST00000394260 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
PRICKLE4-202ENST00000394260 RIMBP3CA6NJZ7 1639 aa33.6■■■□□ 2.97
PRICKLE4-202ENST00000394260 RIMBP3BA6NNM3 1639 aa33.6■■■□□ 2.97
PRICKLE4-202ENST00000394260 RIMBP3Q9UFD9 1639 aa33.6■■■□□ 2.97
PRICKLE4-202ENST00000394260 TDRD9Q8NDG6 1382 aaKnown RBP33.53■■■□□ 2.96
PRICKLE4-202ENST00000394260 ARHGEF11O15085 1522 aa33.5■■■□□ 2.95
PRICKLE4-202ENST00000394260 MAGI1Q96QZ7 1491 aaPredicted RBP33.47■■■□□ 2.95
PRICKLE4-202ENST00000394260 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
PRICKLE4-202ENST00000394260 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
PRICKLE4-202ENST00000394260 PBRM1Q86U86 1689 aa33.43■■■□□ 2.94
PRICKLE4-202ENST00000394260 ABCA10Q8WWZ4 1543 aa33.41■■■□□ 2.94
PRICKLE4-202ENST00000394260 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
PRICKLE4-202ENST00000394260 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
PRICKLE4-202ENST00000394260 FBLN2P98095 1184 aa33.37■■■□□ 2.93
PRICKLE4-202ENST00000394260 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
PRICKLE4-202ENST00000394260 GAPVD1Q14C86 1478 aa33.34■■■□□ 2.93
PRICKLE4-202ENST00000394260 SYNJ1O43426 1573 aa33.32■■■□□ 2.92
PRICKLE4-202ENST00000394260 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
PRICKLE4-202ENST00000394260 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
PRICKLE4-202ENST00000394260 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
PRICKLE4-202ENST00000394260 CHMP7Q8WUX9 453 aaPredicted RBP33.24■■■□□ 2.91
PRICKLE4-202ENST00000394260 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
PRICKLE4-202ENST00000394260 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
PRICKLE4-202ENST00000394260 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
PRICKLE4-202ENST00000394260 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
PRICKLE4-202ENST00000394260 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
PRICKLE4-202ENST00000394260 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
PRICKLE4-202ENST00000394260 NUP160Q12769 1436 aa32.89■■■□□ 2.86
PRICKLE4-202ENST00000394260 CEP170Q5SW79 1584 aa32.88■■■□□ 2.85
PRICKLE4-202ENST00000394260 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
PRICKLE4-202ENST00000394260 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
PRICKLE4-202ENST00000394260 CUL7Q14999 1698 aa32.66■■■□□ 2.82
PRICKLE4-202ENST00000394260 KIF27Q86VH2 1401 aa32.64■■■□□ 2.82
PRICKLE4-202ENST00000394260 RUSC2Q8N2Y8 1516 aa32.62■■■□□ 2.81
PRICKLE4-202ENST00000394260 TRHP20396 242 aaPredicted RBP32.62■■■□□ 2.81
PRICKLE4-202ENST00000394260 IGF1RP08069 1367 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms