RNA–Protein interactions for RNA: ENST00000622285.1

U1.30-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.30-201ENST00000622285 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
U1.30-201ENST00000622285 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
U1.30-201ENST00000622285 ABCC9O60706 1549 aa19.69■□□□□ 0.74
U1.30-201ENST00000622285 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
U1.30-201ENST00000622285 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
U1.30-201ENST00000622285 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
U1.30-201ENST00000622285 NACADO15069 1562 aa19.23■□□□□ 0.67
U1.30-201ENST00000622285 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
U1.30-201ENST00000622285 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
U1.30-201ENST00000622285 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
U1.30-201ENST00000622285 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
U1.30-201ENST00000622285 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
U1.30-201ENST00000622285 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
U1.30-201ENST00000622285 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
U1.30-201ENST00000622285 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
U1.30-201ENST00000622285 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
U1.30-201ENST00000622285 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
U1.30-201ENST00000622285 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
U1.30-201ENST00000622285 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
U1.30-201ENST00000622285 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
U1.30-201ENST00000622285 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
U1.30-201ENST00000622285 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
U1.30-201ENST00000622285 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
U1.30-201ENST00000622285 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
U1.30-201ENST00000622285 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
U1.30-201ENST00000622285 WIZO95785 1651 aa17.75■□□□□ 0.43
U1.30-201ENST00000622285 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
U1.30-201ENST00000622285 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
U1.30-201ENST00000622285 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
U1.30-201ENST00000622285 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
U1.30-201ENST00000622285 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
U1.30-201ENST00000622285 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
U1.30-201ENST00000622285 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
U1.30-201ENST00000622285 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
U1.30-201ENST00000622285 CFTRP13569 1480 aa17.2■□□□□ 0.34
U1.30-201ENST00000622285 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
U1.30-201ENST00000622285 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
U1.30-201ENST00000622285 NESP48681 1621 aa17.1■□□□□ 0.33
U1.30-201ENST00000622285 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
U1.30-201ENST00000622285 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
U1.30-201ENST00000622285 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
U1.30-201ENST00000622285 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
U1.30-201ENST00000622285 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
U1.30-201ENST00000622285 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
U1.30-201ENST00000622285 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
U1.30-201ENST00000622285 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
U1.30-201ENST00000622285 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
U1.30-201ENST00000622285 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
U1.30-201ENST00000622285 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
U1.30-201ENST00000622285 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
U1.30-201ENST00000622285 CUX1P39880 1505 aa16.8■□□□□ 0.28
U1.30-201ENST00000622285 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
U1.30-201ENST00000622285 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
U1.30-201ENST00000622285 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
U1.30-201ENST00000622285 WDR62O43379 1518 aa16.77■□□□□ 0.28
U1.30-201ENST00000622285 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
U1.30-201ENST00000622285 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
U1.30-201ENST00000622285 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
U1.30-201ENST00000622285 SOGA1O94964 1423 aa16.67■□□□□ 0.26
U1.30-201ENST00000622285 CUX2O14529 1486 aa16.64■□□□□ 0.25
U1.30-201ENST00000622285 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
U1.30-201ENST00000622285 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
U1.30-201ENST00000622285 EEA1Q15075 1411 aa16.58■□□□□ 0.24
U1.30-201ENST00000622285 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
U1.30-201ENST00000622285 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
U1.30-201ENST00000622285 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
U1.30-201ENST00000622285 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
U1.30-201ENST00000622285 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
U1.30-201ENST00000622285 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
U1.30-201ENST00000622285 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
U1.30-201ENST00000622285 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
U1.30-201ENST00000622285 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
U1.30-201ENST00000622285 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
U1.30-201ENST00000622285 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
U1.30-201ENST00000622285 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
U1.30-201ENST00000622285 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
U1.30-201ENST00000622285 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
U1.30-201ENST00000622285 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
U1.30-201ENST00000622285 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
U1.30-201ENST00000622285 CUL7Q14999 1698 aa16.37■□□□□ 0.21
U1.30-201ENST00000622285 IGF1RP08069 1367 aa16.37■□□□□ 0.21
U1.30-201ENST00000622285 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
U1.30-201ENST00000622285 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
U1.30-201ENST00000622285 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
U1.30-201ENST00000622285 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
U1.30-201ENST00000622285 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
U1.30-201ENST00000622285 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
U1.30-201ENST00000622285 KIF21BO75037 1637 aa16.3■□□□□ 0.2
U1.30-201ENST00000622285 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
U1.30-201ENST00000622285 FBLN2P98095 1184 aa16.28■□□□□ 0.2
U1.30-201ENST00000622285 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
U1.30-201ENST00000622285 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
U1.30-201ENST00000622285 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
U1.30-201ENST00000622285 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
U1.30-201ENST00000622285 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
U1.30-201ENST00000622285 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
U1.30-201ENST00000622285 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
U1.30-201ENST00000622285 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
U1.30-201ENST00000622285 CHD1O14646 1710 aa16.12■□□□□ 0.17
U1.30-201ENST00000622285 CTTNBP2Q8WZ74 1663 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms