RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
NEDD4L-202ENST00000356462 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
NEDD4L-202ENST00000356462 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
NEDD4L-202ENST00000356462 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
NEDD4L-202ENST00000356462 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
NEDD4L-202ENST00000356462 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
NEDD4L-202ENST00000356462 ABCC9O60706 1549 aa25.86■■□□□ 1.73
NEDD4L-202ENST00000356462 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
NEDD4L-202ENST00000356462 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
NEDD4L-202ENST00000356462 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
NEDD4L-202ENST00000356462 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
NEDD4L-202ENST00000356462 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
NEDD4L-202ENST00000356462 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
NEDD4L-202ENST00000356462 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
NEDD4L-202ENST00000356462 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
NEDD4L-202ENST00000356462 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
NEDD4L-202ENST00000356462 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.611e-13■■□□□ 13
NEDD4L-202ENST00000356462 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
NEDD4L-202ENST00000356462 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
NEDD4L-202ENST00000356462 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.58
NEDD4L-202ENST00000356462 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
NEDD4L-202ENST00000356462 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
NEDD4L-202ENST00000356462 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
NEDD4L-202ENST00000356462 NACADO15069 1562 aa24.63■■□□□ 1.53
NEDD4L-202ENST00000356462 WIZO95785 1651 aa24.49■■□□□ 1.51
NEDD4L-202ENST00000356462 HRCP23327 699 aa24.49■■□□□ 1.51
NEDD4L-202ENST00000356462 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
NEDD4L-202ENST00000356462 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
NEDD4L-202ENST00000356462 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
NEDD4L-202ENST00000356462 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
NEDD4L-202ENST00000356462 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
NEDD4L-202ENST00000356462 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
NEDD4L-202ENST00000356462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
NEDD4L-202ENST00000356462 SOGA1O94964 1423 aa23.92■■□□□ 1.42
NEDD4L-202ENST00000356462 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
NEDD4L-202ENST00000356462 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
NEDD4L-202ENST00000356462 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
NEDD4L-202ENST00000356462 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
NEDD4L-202ENST00000356462 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-202ENST00000356462 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
NEDD4L-202ENST00000356462 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
NEDD4L-202ENST00000356462 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
NEDD4L-202ENST00000356462 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.37
NEDD4L-202ENST00000356462 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
NEDD4L-202ENST00000356462 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
NEDD4L-202ENST00000356462 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
NEDD4L-202ENST00000356462 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
NEDD4L-202ENST00000356462 APLP2Q06481 763 aa23.51■■□□□ 1.35
NEDD4L-202ENST00000356462 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
NEDD4L-202ENST00000356462 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
NEDD4L-202ENST00000356462 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
NEDD4L-202ENST00000356462 ITGAEP38570 1179 aa23.36■■□□□ 1.33
NEDD4L-202ENST00000356462 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
NEDD4L-202ENST00000356462 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
NEDD4L-202ENST00000356462 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
NEDD4L-202ENST00000356462 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
NEDD4L-202ENST00000356462 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
NEDD4L-202ENST00000356462 CLIP1P30622 1438 aa23.22■■□□□ 1.31
NEDD4L-202ENST00000356462 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
NEDD4L-202ENST00000356462 EEA1Q15075 1411 aa23.1■■□□□ 1.29
NEDD4L-202ENST00000356462 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
NEDD4L-202ENST00000356462 KANK4Q5T7N3 995 aaPredicted RBP23.04■■□□□ 1.28
NEDD4L-202ENST00000356462 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
NEDD4L-202ENST00000356462 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
NEDD4L-202ENST00000356462 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
NEDD4L-202ENST00000356462 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
NEDD4L-202ENST00000356462 ARID3CA6NKF2 412 aa22.91■■□□□ 1.26
NEDD4L-202ENST00000356462 CUX2O14529 1486 aa22.9■■□□□ 1.26
NEDD4L-202ENST00000356462 CUX1P39880 1505 aa22.89■■□□□ 1.25
NEDD4L-202ENST00000356462 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
NEDD4L-202ENST00000356462 VPS8Q8N3P4 1428 aa22.85■■□□□ 1.25
NEDD4L-202ENST00000356462 NESP48681 1621 aa22.84■■□□□ 1.25
NEDD4L-202ENST00000356462 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
NEDD4L-202ENST00000356462 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
NEDD4L-202ENST00000356462 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
NEDD4L-202ENST00000356462 CFTRP13569 1480 aa22.78■■□□□ 1.24
NEDD4L-202ENST00000356462 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
NEDD4L-202ENST00000356462 KIF21BO75037 1637 aa22.74■■□□□ 1.23
NEDD4L-202ENST00000356462 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
NEDD4L-202ENST00000356462 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
NEDD4L-202ENST00000356462 HMGXB3Q12766 1538 aa22.7■■□□□ 1.23
NEDD4L-202ENST00000356462 IGF1RP08069 1367 aa22.69■■□□□ 1.22
NEDD4L-202ENST00000356462 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
NEDD4L-202ENST00000356462 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
NEDD4L-202ENST00000356462 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
NEDD4L-202ENST00000356462 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
NEDD4L-202ENST00000356462 NEUROD1Q13562 356 aa22.64■■□□□ 1.22
NEDD4L-202ENST00000356462 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.22
NEDD4L-202ENST00000356462 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
NEDD4L-202ENST00000356462 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
NEDD4L-202ENST00000356462 MIER1Q8N108 512 aa22.54■■□□□ 1.2
NEDD4L-202ENST00000356462 FBLN2P98095 1184 aa22.52■■□□□ 1.2
NEDD4L-202ENST00000356462 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.2
NEDD4L-202ENST00000356462 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
NEDD4L-202ENST00000356462 FHOD3Q2V2M9 1422 aa22.51■■□□□ 1.19
NEDD4L-202ENST00000356462 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
NEDD4L-202ENST00000356462 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
NEDD4L-202ENST00000356462 GTF3C3Q9Y5Q9 886 aa22.41■■□□□ 1.18
NEDD4L-202ENST00000356462 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
NEDD4L-202ENST00000356462 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms