RNA–Protein interactions for RNA: ENST00000471202.5

CHTF18-208, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,494 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-208ENST00000471202 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.68
CHTF18-208ENST00000471202 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
CHTF18-208ENST00000471202 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
CHTF18-208ENST00000471202 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
CHTF18-208ENST00000471202 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
CHTF18-208ENST00000471202 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
CHTF18-208ENST00000471202 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
CHTF18-208ENST00000471202 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
CHTF18-208ENST00000471202 APLP2Q06481 763 aa22.59■■□□□ 1.21
CHTF18-208ENST00000471202 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
CHTF18-208ENST00000471202 ZEB1P37275 1124 aaPredicted RBP22.32■■□□□ 1.16
CHTF18-208ENST00000471202 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
CHTF18-208ENST00000471202 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
CHTF18-208ENST00000471202 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
CHTF18-208ENST00000471202 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
CHTF18-208ENST00000471202 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
CHTF18-208ENST00000471202 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
CHTF18-208ENST00000471202 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
CHTF18-208ENST00000471202 HRCP23327 699 aa22.07■■□□□ 1.12
CHTF18-208ENST00000471202 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
CHTF18-208ENST00000471202 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
CHTF18-208ENST00000471202 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
CHTF18-208ENST00000471202 ABCC9O60706 1549 aa21.8■■□□□ 1.08
CHTF18-208ENST00000471202 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
CHTF18-208ENST00000471202 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
CHTF18-208ENST00000471202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
CHTF18-208ENST00000471202 ITGAEP38570 1179 aa21.41■■□□□ 1.02
CHTF18-208ENST00000471202 NEFLP07196 543 aa21.29■■□□□ 1
CHTF18-208ENST00000471202 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.997e-7■■■■■ 33
CHTF18-208ENST00000471202 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
CHTF18-208ENST00000471202 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
CHTF18-208ENST00000471202 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
CHTF18-208ENST00000471202 MYT1Q01538 1121 aa21.12■□□□□ 0.97
CHTF18-208ENST00000471202 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
CHTF18-208ENST00000471202 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
CHTF18-208ENST00000471202 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.94
CHTF18-208ENST00000471202 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
CHTF18-208ENST00000471202 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
CHTF18-208ENST00000471202 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
CHTF18-208ENST00000471202 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
CHTF18-208ENST00000471202 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
CHTF18-208ENST00000471202 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
CHTF18-208ENST00000471202 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
CHTF18-208ENST00000471202 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
CHTF18-208ENST00000471202 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
CHTF18-208ENST00000471202 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
CHTF18-208ENST00000471202 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
CHTF18-208ENST00000471202 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
CHTF18-208ENST00000471202 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.88
CHTF18-208ENST00000471202 BCANQ96GW7 911 aa20.49■□□□□ 0.87
CHTF18-208ENST00000471202 ANP32CO43423 234 aa20.47■□□□□ 0.87
CHTF18-208ENST00000471202 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
CHTF18-208ENST00000471202 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
CHTF18-208ENST00000471202 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
CHTF18-208ENST00000471202 FBLN2P98095 1184 aa20.31■□□□□ 0.84
CHTF18-208ENST00000471202 SLC4A1APQ9BWU0 796 aaKnown RBP20.25■□□□□ 0.83
CHTF18-208ENST00000471202 CLIP1P30622 1438 aa20.22■□□□□ 0.83
CHTF18-208ENST00000471202 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
CHTF18-208ENST00000471202 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
CHTF18-208ENST00000471202 NACADO15069 1562 aa20.17■□□□□ 0.82
CHTF18-208ENST00000471202 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
CHTF18-208ENST00000471202 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
CHTF18-208ENST00000471202 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
CHTF18-208ENST00000471202 CDK11AQ9UQ88 783 aaPredicted RBP20.14■□□□□ 0.82
CHTF18-208ENST00000471202 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
CHTF18-208ENST00000471202 EEA1Q15075 1411 aa20.13■□□□□ 0.81
CHTF18-208ENST00000471202 MIER1Q8N108 512 aa20.12■□□□□ 0.81
CHTF18-208ENST00000471202 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
CHTF18-208ENST00000471202 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
CHTF18-208ENST00000471202 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
CHTF18-208ENST00000471202 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
CHTF18-208ENST00000471202 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
CHTF18-208ENST00000471202 FKBP8Q14318 412 aa20.05■□□□□ 0.8
CHTF18-208ENST00000471202 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
CHTF18-208ENST00000471202 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.79
CHTF18-208ENST00000471202 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
CHTF18-208ENST00000471202 HIRIP3Q9BW71 556 aaPredicted RBP19.94■□□□□ 0.78
CHTF18-208ENST00000471202 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
CHTF18-208ENST00000471202 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
CHTF18-208ENST00000471202 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
CHTF18-208ENST00000471202 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
CHTF18-208ENST00000471202 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
CHTF18-208ENST00000471202 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
CHTF18-208ENST00000471202 SOGA1O94964 1423 aa19.87■□□□□ 0.77
CHTF18-208ENST00000471202 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
CHTF18-208ENST00000471202 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
CHTF18-208ENST00000471202 MRS2Q9HD23 443 aa19.75■□□□□ 0.75
CHTF18-208ENST00000471202 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
CHTF18-208ENST00000471202 ANP32AP39687 249 aaKnown RBP19.74■□□□□ 0.75
CHTF18-208ENST00000471202 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
CHTF18-208ENST00000471202 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHTF18-208ENST00000471202 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
CHTF18-208ENST00000471202 TSPY4P0CV99 314 aa19.7■□□□□ 0.74
CHTF18-208ENST00000471202 TSPY10P0CW01 314 aa19.7■□□□□ 0.74
CHTF18-208ENST00000471202 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
CHTF18-208ENST00000471202 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
CHTF18-208ENST00000471202 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
CHTF18-208ENST00000471202 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
CHTF18-208ENST00000471202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.741e-6■■□□□ 14.5
CHTF18-208ENST00000471202 IRX6P78412 446 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms