RNA–Protein interactions for RNA: ENST00000562583.5

ATXN2L-208, Transcript of ataxin 2 like, humanhuman

TSL 1 (best)

Gene ATXN2L, Length 1,933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2L-208ENST00000562583 NISCHQ9Y2I1 1504 aa42.17■■■■■ 4.34
ATXN2L-208ENST00000562583 CCDC180Q9P1Z9 1646 aa37.04■■■■□ 3.52
ATXN2L-208ENST00000562583 ABCC9O60706 1549 aa35.63■■■■□ 3.3
ATXN2L-208ENST00000562583 ZCCHC6Q5VYS8 1495 aaKnown RBP35.3■■■■□ 3.24
ATXN2L-208ENST00000562583 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
ATXN2L-208ENST00000562583 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
ATXN2L-208ENST00000562583 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
ATXN2L-208ENST00000562583 NACADO15069 1562 aa34.66■■■■□ 3.14
ATXN2L-208ENST00000562583 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.11
ATXN2L-208ENST00000562583 SCRIBQ14160 1630 aa33.98■■■■□ 3.03
ATXN2L-208ENST00000562583 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
ATXN2L-208ENST00000562583 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
ATXN2L-208ENST00000562583 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
ATXN2L-208ENST00000562583 PABPN1Q86U42 306 aaKnown RBP eCLIP33.48■■■□□ 2.951e-7■□□□□ 10.1
ATXN2L-208ENST00000562583 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
ATXN2L-208ENST00000562583 BAZ1AQ9NRL2 1556 aaPredicted RBP32.59■■■□□ 2.81
ATXN2L-208ENST00000562583 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
ATXN2L-208ENST00000562583 EIF4G1Q04637 1599 aaKnown RBP32.55■■■□□ 2.8
ATXN2L-208ENST00000562583 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
ATXN2L-208ENST00000562583 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
ATXN2L-208ENST00000562583 SUPT5HO00267 1087 aaKnown RBP32.3■■■□□ 2.76
ATXN2L-208ENST00000562583 WIZO95785 1651 aa32.24■■■□□ 2.75
ATXN2L-208ENST00000562583 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
ATXN2L-208ENST00000562583 ATAD2BQ9ULI0 1458 aa32.19■■■□□ 2.74
ATXN2L-208ENST00000562583 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
ATXN2L-208ENST00000562583 SMARCA2P51531 1590 aa32.12■■■□□ 2.73
ATXN2L-208ENST00000562583 DNAJC5BQ9UF47 199 aa32.07■■■□□ 2.72
ATXN2L-208ENST00000562583 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
ATXN2L-208ENST00000562583 BAZ1BQ9UIG0 1483 aaKnown RBP31.94■■■□□ 2.7
ATXN2L-208ENST00000562583 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
ATXN2L-208ENST00000562583 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
ATXN2L-208ENST00000562583 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
ATXN2L-208ENST00000562583 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
ATXN2L-208ENST00000562583 CFTRP13569 1480 aa31.13■■■□□ 2.57
ATXN2L-208ENST00000562583 NESP48681 1621 aa31.1■■■□□ 2.57
ATXN2L-208ENST00000562583 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.55
ATXN2L-208ENST00000562583 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
ATXN2L-208ENST00000562583 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
ATXN2L-208ENST00000562583 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
ATXN2L-208ENST00000562583 ABCC8Q09428 1581 aa30.69■■■□□ 2.5
ATXN2L-208ENST00000562583 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
ATXN2L-208ENST00000562583 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
ATXN2L-208ENST00000562583 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
ATXN2L-208ENST00000562583 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
ATXN2L-208ENST00000562583 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
ATXN2L-208ENST00000562583 CUX1P39880 1505 aa30.48■■■□□ 2.47
ATXN2L-208ENST00000562583 SYNJ1O43426 1573 aa30.47■■■□□ 2.47
ATXN2L-208ENST00000562583 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
ATXN2L-208ENST00000562583 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
ATXN2L-208ENST00000562583 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
ATXN2L-208ENST00000562583 TOPBP1Q92547 1522 aa30.4■■■□□ 2.46
ATXN2L-208ENST00000562583 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
ATXN2L-208ENST00000562583 TOP2BQ02880 1626 aa30.39■■■□□ 2.45
ATXN2L-208ENST00000562583 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
ATXN2L-208ENST00000562583 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
ATXN2L-208ENST00000562583 WDR62O43379 1518 aa30.32■■■□□ 2.44
ATXN2L-208ENST00000562583 FGD5Q6ZNL6 1462 aa30.24■■■□□ 2.43
ATXN2L-208ENST00000562583 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
ATXN2L-208ENST00000562583 CUX2O14529 1486 aa30.1■■■□□ 2.41
ATXN2L-208ENST00000562583 RAD54L2Q9Y4B4 1467 aa30.1■■■□□ 2.41
ATXN2L-208ENST00000562583 SOGA1O94964 1423 aa30.08■■■□□ 2.41
ATXN2L-208ENST00000562583 TARBP1Q13395 1621 aaKnown RBP29.99■■■□□ 2.39
ATXN2L-208ENST00000562583 IFT140Q96RY7 1462 aa29.97■■■□□ 2.39
ATXN2L-208ENST00000562583 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
ATXN2L-208ENST00000562583 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
ATXN2L-208ENST00000562583 WDR97A6NE52 1622 aa29.92■■■□□ 2.38
ATXN2L-208ENST00000562583 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
ATXN2L-208ENST00000562583 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
ATXN2L-208ENST00000562583 FAM9AQ8IZU1 332 aaPredicted RBP29.84■■■□□ 2.37
ATXN2L-208ENST00000562583 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
ATXN2L-208ENST00000562583 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.363e-12■■■■■ 38.1
ATXN2L-208ENST00000562583 ABCA5Q8WWZ7 1642 aa29.77■■■□□ 2.36
ATXN2L-208ENST00000562583 EEA1Q15075 1411 aa29.75■■■□□ 2.35
ATXN2L-208ENST00000562583 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
ATXN2L-208ENST00000562583 EIF4G3O43432 1585 aaKnown RBP29.72■■■□□ 2.35
ATXN2L-208ENST00000562583 CSRNP3Q8WYN3 585 aa29.67■■■□□ 2.34
ATXN2L-208ENST00000562583 IGF1RP08069 1367 aa29.67■■■□□ 2.34
ATXN2L-208ENST00000562583 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
ATXN2L-208ENST00000562583 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
ATXN2L-208ENST00000562583 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
ATXN2L-208ENST00000562583 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
ATXN2L-208ENST00000562583 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
ATXN2L-208ENST00000562583 CARMIL1Q5VZK9 1371 aa29.49■■■□□ 2.31
ATXN2L-208ENST00000562583 CUL7Q14999 1698 aa29.45■■■□□ 2.3
ATXN2L-208ENST00000562583 EHMT2Q96KQ7 1210 aa29.45■■■□□ 2.3
ATXN2L-208ENST00000562583 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
ATXN2L-208ENST00000562583 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
ATXN2L-208ENST00000562583 KIF21BO75037 1637 aa29.41■■■□□ 2.3
ATXN2L-208ENST00000562583 LOC105371045A0A1W2PR82 267 aa29.41■■■□□ 2.3
ATXN2L-208ENST00000562583 FHAD1B1AJZ9 1412 aa29.41■■■□□ 2.3
ATXN2L-208ENST00000562583 RAPGEF2Q9Y4G8 1499 aa29.4■■■□□ 2.3
ATXN2L-208ENST00000562583 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
ATXN2L-208ENST00000562583 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
ATXN2L-208ENST00000562583 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
ATXN2L-208ENST00000562583 FBLN2P98095 1184 aa29.26■■■□□ 2.27
ATXN2L-208ENST00000562583 GRIN2AQ12879 1464 aa29.24■■■□□ 2.27
ATXN2L-208ENST00000562583 UBTFP17480 764 aaKnown RBP29.21■■■□□ 2.27
ATXN2L-208ENST00000562583 CHD1O14646 1710 aa29.17■■■□□ 2.26
ATXN2L-208ENST00000562583 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
ATXN2L-208ENST00000562583 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms