RNA–Protein interactions for RNA: ENST00000357895.9

NEDD4L-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-203ENST00000357895 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
NEDD4L-203ENST00000357895 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
NEDD4L-203ENST00000357895 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
NEDD4L-203ENST00000357895 HRCP23327 699 aa15.73■□□□□ 0.11
NEDD4L-203ENST00000357895 PCGF6Q9BYE7 350 aa15.71■□□□□ 0.1
NEDD4L-203ENST00000357895 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
NEDD4L-203ENST00000357895 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
NEDD4L-203ENST00000357895 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
NEDD4L-203ENST00000357895 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
NEDD4L-203ENST00000357895 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
NEDD4L-203ENST00000357895 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-203ENST00000357895 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
NEDD4L-203ENST00000357895 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
NEDD4L-203ENST00000357895 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
NEDD4L-203ENST00000357895 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
NEDD4L-203ENST00000357895 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
NEDD4L-203ENST00000357895 ZEB1P37275 1124 aaPredicted RBP14.98□□□□□ -0.01
NEDD4L-203ENST00000357895 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
NEDD4L-203ENST00000357895 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
NEDD4L-203ENST00000357895 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-203ENST00000357895 CCER1Q8TC90 406 aaPredicted RBP14.67□□□□□ -0.06
NEDD4L-203ENST00000357895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
NEDD4L-203ENST00000357895 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
NEDD4L-203ENST00000357895 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
NEDD4L-203ENST00000357895 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.08
NEDD4L-203ENST00000357895 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
NEDD4L-203ENST00000357895 NEUROD1Q13562 356 aa14.49□□□□□ -0.09
NEDD4L-203ENST00000357895 ABCC9O60706 1549 aa14.48□□□□□ -0.09
NEDD4L-203ENST00000357895 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
NEDD4L-203ENST00000357895 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
NEDD4L-203ENST00000357895 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
NEDD4L-203ENST00000357895 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
NEDD4L-203ENST00000357895 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
NEDD4L-203ENST00000357895 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
NEDD4L-203ENST00000357895 MYT1Q01538 1121 aa14.25□□□□□ -0.13
NEDD4L-203ENST00000357895 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
NEDD4L-203ENST00000357895 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.14
NEDD4L-203ENST00000357895 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
NEDD4L-203ENST00000357895 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
NEDD4L-203ENST00000357895 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
NEDD4L-203ENST00000357895 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
NEDD4L-203ENST00000357895 APLP2Q06481 763 aa14.08□□□□□ -0.16
NEDD4L-203ENST00000357895 MIER1Q8N108 512 aa14.08□□□□□ -0.16
NEDD4L-203ENST00000357895 WIZO95785 1651 aa14.07□□□□□ -0.16
NEDD4L-203ENST00000357895 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
NEDD4L-203ENST00000357895 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
NEDD4L-203ENST00000357895 ABCC8Q09428 1581 aa14□□□□□ -0.17
NEDD4L-203ENST00000357895 SOGA1O94964 1423 aa13.99□□□□□ -0.17
NEDD4L-203ENST00000357895 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
NEDD4L-203ENST00000357895 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
NEDD4L-203ENST00000357895 NACADO15069 1562 aa13.93□□□□□ -0.18
NEDD4L-203ENST00000357895 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
NEDD4L-203ENST00000357895 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
NEDD4L-203ENST00000357895 GOLGA3Q08378 1498 aa13.85□□□□□ -0.19
NEDD4L-203ENST00000357895 EEA1Q15075 1411 aa13.84□□□□□ -0.19
NEDD4L-203ENST00000357895 CLIP1P30622 1438 aa13.8□□□□□ -0.2
NEDD4L-203ENST00000357895 TOP2AP11388 1531 aaKnown RBP13.78□□□□□ -0.2
NEDD4L-203ENST00000357895 ITGAEP38570 1179 aa13.77□□□□□ -0.21
NEDD4L-203ENST00000357895 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.211e-13■■□□□ 13
NEDD4L-203ENST00000357895 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
NEDD4L-203ENST00000357895 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
NEDD4L-203ENST00000357895 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
NEDD4L-203ENST00000357895 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
NEDD4L-203ENST00000357895 BCANQ96GW7 911 aa13.71□□□□□ -0.21
NEDD4L-203ENST00000357895 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
NEDD4L-203ENST00000357895 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
NEDD4L-203ENST00000357895 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
NEDD4L-203ENST00000357895 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
NEDD4L-203ENST00000357895 NEFLP07196 543 aa13.59□□□□□ -0.23
NEDD4L-203ENST00000357895 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
NEDD4L-203ENST00000357895 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
NEDD4L-203ENST00000357895 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
NEDD4L-203ENST00000357895 FKBP8Q14318 412 aa13.57□□□□□ -0.24
NEDD4L-203ENST00000357895 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
NEDD4L-203ENST00000357895 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
NEDD4L-203ENST00000357895 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
NEDD4L-203ENST00000357895 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
NEDD4L-203ENST00000357895 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
NEDD4L-203ENST00000357895 KIF21BO75037 1637 aa13.51□□□□□ -0.25
NEDD4L-203ENST00000357895 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-203ENST00000357895 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
NEDD4L-203ENST00000357895 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-203ENST00000357895 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
NEDD4L-203ENST00000357895 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
NEDD4L-203ENST00000357895 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
NEDD4L-203ENST00000357895 ANP32CO43423 234 aa13.41□□□□□ -0.26
NEDD4L-203ENST00000357895 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
NEDD4L-203ENST00000357895 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
NEDD4L-203ENST00000357895 BCL11AQ9H165 835 aa13.36□□□□□ -0.27
NEDD4L-203ENST00000357895 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
NEDD4L-203ENST00000357895 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
NEDD4L-203ENST00000357895 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-203ENST00000357895 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.27
NEDD4L-203ENST00000357895 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-203ENST00000357895 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
NEDD4L-203ENST00000357895 IRX6P78412 446 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-203ENST00000357895 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
NEDD4L-203ENST00000357895 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
NEDD4L-203ENST00000357895 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
NEDD4L-203ENST00000357895 HNRNPUQ00839 825 aaKnown RBP eCLIP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms