RNA–Protein interactions for RNA: ENST00000464728.5

CHTF18-207, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,088 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-207ENST00000464728 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
CHTF18-207ENST00000464728 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
CHTF18-207ENST00000464728 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
CHTF18-207ENST00000464728 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
CHTF18-207ENST00000464728 ABCC9O60706 1549 aa24.26■■□□□ 1.47
CHTF18-207ENST00000464728 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
CHTF18-207ENST00000464728 PABPN1Q86U42 306 aaKnown RBP eCLIP23.68■■□□□ 1.387e-7■■■■■ 33
CHTF18-207ENST00000464728 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
CHTF18-207ENST00000464728 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
CHTF18-207ENST00000464728 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
CHTF18-207ENST00000464728 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
CHTF18-207ENST00000464728 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
CHTF18-207ENST00000464728 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
CHTF18-207ENST00000464728 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
CHTF18-207ENST00000464728 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
CHTF18-207ENST00000464728 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
CHTF18-207ENST00000464728 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
CHTF18-207ENST00000464728 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
CHTF18-207ENST00000464728 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
CHTF18-207ENST00000464728 APLP2Q06481 763 aa22.7■■□□□ 1.22
CHTF18-207ENST00000464728 NACADO15069 1562 aa22.67■■□□□ 1.22
CHTF18-207ENST00000464728 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
CHTF18-207ENST00000464728 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
CHTF18-207ENST00000464728 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.2
CHTF18-207ENST00000464728 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
CHTF18-207ENST00000464728 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
CHTF18-207ENST00000464728 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
CHTF18-207ENST00000464728 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
CHTF18-207ENST00000464728 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
CHTF18-207ENST00000464728 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
CHTF18-207ENST00000464728 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
CHTF18-207ENST00000464728 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
CHTF18-207ENST00000464728 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
CHTF18-207ENST00000464728 ITGAEP38570 1179 aa21.91■■□□□ 1.1
CHTF18-207ENST00000464728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
CHTF18-207ENST00000464728 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
CHTF18-207ENST00000464728 FBLN2P98095 1184 aa21.88■■□□□ 1.09
CHTF18-207ENST00000464728 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
CHTF18-207ENST00000464728 WIZO95785 1651 aa21.74■■□□□ 1.07
CHTF18-207ENST00000464728 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
CHTF18-207ENST00000464728 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
CHTF18-207ENST00000464728 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
CHTF18-207ENST00000464728 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
CHTF18-207ENST00000464728 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
CHTF18-207ENST00000464728 SMARCA4P51532 1647 aa21.52■■□□□ 1.03
CHTF18-207ENST00000464728 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
CHTF18-207ENST00000464728 HRCP23327 699 aa21.48■■□□□ 1.03
CHTF18-207ENST00000464728 FAM50AQ14320 339 aaKnown RBP21.48■■□□□ 1.03
CHTF18-207ENST00000464728 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
CHTF18-207ENST00000464728 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
CHTF18-207ENST00000464728 SOGA1O94964 1423 aa21.42■■□□□ 1.02
CHTF18-207ENST00000464728 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CHTF18-207ENST00000464728 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
CHTF18-207ENST00000464728 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
CHTF18-207ENST00000464728 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
CHTF18-207ENST00000464728 CLIP1P30622 1438 aa21.24■□□□□ 0.99
CHTF18-207ENST00000464728 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CHTF18-207ENST00000464728 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
CHTF18-207ENST00000464728 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
CHTF18-207ENST00000464728 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
CHTF18-207ENST00000464728 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
CHTF18-207ENST00000464728 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
CHTF18-207ENST00000464728 CUX2O14529 1486 aa21.17■□□□□ 0.98
CHTF18-207ENST00000464728 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
CHTF18-207ENST00000464728 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
CHTF18-207ENST00000464728 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
CHTF18-207ENST00000464728 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
CHTF18-207ENST00000464728 ZNF777Q9ULD5 760 aaPredicted RBP21.1■□□□□ 0.97
CHTF18-207ENST00000464728 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
CHTF18-207ENST00000464728 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
CHTF18-207ENST00000464728 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
CHTF18-207ENST00000464728 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
CHTF18-207ENST00000464728 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
CHTF18-207ENST00000464728 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
CHTF18-207ENST00000464728 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
CHTF18-207ENST00000464728 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
CHTF18-207ENST00000464728 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
CHTF18-207ENST00000464728 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
CHTF18-207ENST00000464728 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
CHTF18-207ENST00000464728 CHIC2Q9UKJ5 165 aa20.91■□□□□ 0.94
CHTF18-207ENST00000464728 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
CHTF18-207ENST00000464728 MTUS2Q5JR59 1369 aa20.89■□□□□ 0.94
CHTF18-207ENST00000464728 NESP48681 1621 aa20.87■□□□□ 0.93
CHTF18-207ENST00000464728 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
CHTF18-207ENST00000464728 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.92
CHTF18-207ENST00000464728 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
CHTF18-207ENST00000464728 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.91
CHTF18-207ENST00000464728 CFTRP13569 1480 aa20.76■□□□□ 0.91
CHTF18-207ENST00000464728 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
CHTF18-207ENST00000464728 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
CHTF18-207ENST00000464728 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHTF18-207ENST00000464728 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
CHTF18-207ENST00000464728 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
CHTF18-207ENST00000464728 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
CHTF18-207ENST00000464728 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
CHTF18-207ENST00000464728 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
CHTF18-207ENST00000464728 IGF1RP08069 1367 aa20.67■□□□□ 0.9
CHTF18-207ENST00000464728 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
CHTF18-207ENST00000464728 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CHTF18-207ENST00000464728 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms