RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 NISCHQ9Y2I1 1504 aa53.54■■■■■ 6.16
NEDD4L-225ENST00000589054 ABCC9O60706 1549 aa47.96■■■■■ 5.27
NEDD4L-225ENST00000589054 CCDC180Q9P1Z9 1646 aa47.81■■■■■ 5.24
NEDD4L-225ENST00000589054 RB1CC1Q8TDY2 1594 aa45.51■■■■■ 4.88
NEDD4L-225ENST00000589054 NACADO15069 1562 aa45.25■■■■■ 4.83
NEDD4L-225ENST00000589054 DCAF8L2P0C7V8 631 aa45.22■■■■■ 4.83
NEDD4L-225ENST00000589054 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
NEDD4L-225ENST00000589054 PABPN1Q86U42 306 aaKnown RBP eCLIP44.77■■■■■ 4.761e-13■■□□□ 13
NEDD4L-225ENST00000589054 MYO15BQ96JP2 1530 aa44.66■■■■■ 4.74
NEDD4L-225ENST00000589054 UNC13AQ9UPW8 1703 aa44.52■■■■■ 4.72
NEDD4L-225ENST00000589054 ZCCHC6Q5VYS8 1495 aaKnown RBP44.39■■■■■ 4.7
NEDD4L-225ENST00000589054 BICRAQ9NZM4 1560 aa44.36■■■■■ 4.69
NEDD4L-225ENST00000589054 DCAF1Q9Y4B6 1507 aa44.15■■■■■ 4.66
NEDD4L-225ENST00000589054 SCRIBQ14160 1630 aa43.72■■■■■ 4.59
NEDD4L-225ENST00000589054 SHROOM4Q9ULL8 1493 aa43.54■■■■■ 4.56
NEDD4L-225ENST00000589054 CC2D2AQ9P2K1 1620 aa43.26■■■■■ 4.52
NEDD4L-225ENST00000589054 EIF4G1Q04637 1599 aaKnown RBP43.18■■■■■ 4.5
NEDD4L-225ENST00000589054 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
NEDD4L-225ENST00000589054 NCAPD3P42695 1498 aa41.88■■■■■ 4.29
NEDD4L-225ENST00000589054 ATAD2BQ9ULI0 1458 aa41.79■■■■■ 4.28
NEDD4L-225ENST00000589054 SMARCA4P51532 1647 aa41.69■■■■■ 4.27
NEDD4L-225ENST00000589054 SMARCA2P51531 1590 aa41.54■■■■■ 4.24
NEDD4L-225ENST00000589054 HMGXB3Q12766 1538 aa41.48■■■■■ 4.23
NEDD4L-225ENST00000589054 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
NEDD4L-225ENST00000589054 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
NEDD4L-225ENST00000589054 BAZ1BQ9UIG0 1483 aaKnown RBP41.31■■■■■ 4.2
NEDD4L-225ENST00000589054 NESP48681 1621 aa41.28■■■■■ 4.2
NEDD4L-225ENST00000589054 PEG3Q9GZU2 1588 aa41.28■■■■■ 4.2
NEDD4L-225ENST00000589054 ERCC6Q03468 1493 aa41.27■■■■■ 4.2
NEDD4L-225ENST00000589054 DNAJC5Q9H3Z4 198 aa41.18■■■■■ 4.18
NEDD4L-225ENST00000589054 CUX2O14529 1486 aa41.15■■■■■ 4.18
NEDD4L-225ENST00000589054 LAMC3Q9Y6N6 1575 aa40.8■■■■■ 4.12
NEDD4L-225ENST00000589054 WIZO95785 1651 aa40.78■■■■■ 4.12
NEDD4L-225ENST00000589054 THOC2Q8NI27 1593 aaKnown RBP40.71■■■■■ 4.11
NEDD4L-225ENST00000589054 CADPSQ9ULU8 1353 aa40.62■■■■■ 4.09
NEDD4L-225ENST00000589054 PDS5BQ9NTI5 1447 aa40.6■■■■■ 4.09
NEDD4L-225ENST00000589054 KIF21AQ7Z4S6 1674 aa40.59■■■■■ 4.09
NEDD4L-225ENST00000589054 RSF1Q96T23 1441 aaPredicted RBP40.51■■■■■ 4.08
NEDD4L-225ENST00000589054 MRC2Q9UBG0 1479 aa40.27■■■■■ 4.04
NEDD4L-225ENST00000589054 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
NEDD4L-225ENST00000589054 CFTRP13569 1480 aa40.17■■■■■ 4.02
NEDD4L-225ENST00000589054 WDR62O43379 1518 aa40.16■■■■■ 4.02
NEDD4L-225ENST00000589054 FANCD2Q9BXW9 1451 aa40.13■■■■■ 4.02
NEDD4L-225ENST00000589054 CEP164Q9UPV0 1460 aa40.11■■■■■ 4.01
NEDD4L-225ENST00000589054 CCDC88BA6NC98 1476 aa39.87■■■■□ 3.97
NEDD4L-225ENST00000589054 URB2Q14146 1524 aaKnown RBP39.86■■■■□ 3.97
NEDD4L-225ENST00000589054 PRDM2Q13029 1718 aa39.54■■■■□ 3.92
NEDD4L-225ENST00000589054 TRIM41Q8WV44 630 aa39.41■■■■□ 3.9
NEDD4L-225ENST00000589054 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
NEDD4L-225ENST00000589054 ZNF608Q9ULD9 1512 aaPredicted RBP39.39■■■■□ 3.9
NEDD4L-225ENST00000589054 OSCARQ8IYS5 282 aa39.38■■■■□ 3.89
NEDD4L-225ENST00000589054 IFT140Q96RY7 1462 aa39.31■■■■□ 3.88
NEDD4L-225ENST00000589054 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
NEDD4L-225ENST00000589054 ABCC8Q09428 1581 aa39.18■■■■□ 3.86
NEDD4L-225ENST00000589054 AQRO60306 1485 aaKnown RBP eCLIP39.04■■■■□ 3.843e-8■■■■□ 24.8
NEDD4L-225ENST00000589054 TARBP1Q13395 1621 aaKnown RBP39.03■■■■□ 3.84
NEDD4L-225ENST00000589054 POLA1P09884 1462 aaPredicted RBP39.02■■■■□ 3.84
NEDD4L-225ENST00000589054 EIF4G3O43432 1585 aaKnown RBP39.02■■■■□ 3.84
NEDD4L-225ENST00000589054 RAD54L2Q9Y4B4 1467 aa38.95■■■■□ 3.83
NEDD4L-225ENST00000589054 SOGA1O94964 1423 aa38.84■■■■□ 3.81
NEDD4L-225ENST00000589054 SUPT5HO00267 1087 aaKnown RBP38.83■■■■□ 3.81
NEDD4L-225ENST00000589054 TDRD9Q8NDG6 1382 aaKnown RBP38.82■■■■□ 3.81
NEDD4L-225ENST00000589054 RIMBP3CA6NJZ7 1639 aa38.82■■■■□ 3.81
NEDD4L-225ENST00000589054 RIMBP3BA6NNM3 1639 aa38.82■■■■□ 3.81
NEDD4L-225ENST00000589054 RIMBP3Q9UFD9 1639 aa38.82■■■■□ 3.81
NEDD4L-225ENST00000589054 CUX1P39880 1505 aa38.8■■■■□ 3.8
NEDD4L-225ENST00000589054 FGD5Q6ZNL6 1462 aa38.78■■■■□ 3.8
NEDD4L-225ENST00000589054 ARHGEF11O15085 1522 aa38.73■■■■□ 3.79
NEDD4L-225ENST00000589054 FBLN2P98095 1184 aa38.7■■■■□ 3.79
NEDD4L-225ENST00000589054 CHD1O14646 1710 aa38.68■■■■□ 3.78
NEDD4L-225ENST00000589054 SNAPC4Q5SXM2 1469 aa38.56■■■■□ 3.76
NEDD4L-225ENST00000589054 CYB5RLQ6IPT4 315 aa38.52■■■■□ 3.76
NEDD4L-225ENST00000589054 WDR97A6NE52 1622 aa38.45■■■■□ 3.75
NEDD4L-225ENST00000589054 GRIN2BQ13224 1484 aa38.43■■■■□ 3.74
NEDD4L-225ENST00000589054 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
NEDD4L-225ENST00000589054 CHMP7Q8WUX9 453 aaPredicted RBP38.4■■■■□ 3.74
NEDD4L-225ENST00000589054 MAGI1Q96QZ7 1491 aaPredicted RBP38.39■■■■□ 3.74
NEDD4L-225ENST00000589054 GAPVD1Q14C86 1478 aa38.34■■■■□ 3.73
NEDD4L-225ENST00000589054 CLASP1Q7Z460 1538 aa38.33■■■■□ 3.73
NEDD4L-225ENST00000589054 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.72
NEDD4L-225ENST00000589054 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
NEDD4L-225ENST00000589054 ABCA5Q8WWZ7 1642 aa38.23■■■■□ 3.71
NEDD4L-225ENST00000589054 PBRM1Q86U86 1689 aa38.2■■■■□ 3.71
NEDD4L-225ENST00000589054 SYNJ1O43426 1573 aa38.19■■■■□ 3.7
NEDD4L-225ENST00000589054 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
NEDD4L-225ENST00000589054 TOP2BQ02880 1626 aa38.11■■■■□ 3.69
NEDD4L-225ENST00000589054 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
NEDD4L-225ENST00000589054 TRHP20396 242 aaPredicted RBP37.98■■■■□ 3.67
NEDD4L-225ENST00000589054 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
NEDD4L-225ENST00000589054 ADAMTS12P58397 1594 aa37.93■■■■□ 3.66
NEDD4L-225ENST00000589054 NUP160Q12769 1436 aa37.87■■■■□ 3.65
NEDD4L-225ENST00000589054 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
NEDD4L-225ENST00000589054 ERCC6L2Q5T890 1561 aa37.85■■■■□ 3.65
NEDD4L-225ENST00000589054 FHAD1B1AJZ9 1412 aa37.85■■■■□ 3.65
NEDD4L-225ENST00000589054 ERICH3Q5RHP9 1530 aa37.78■■■■□ 3.64
NEDD4L-225ENST00000589054 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
NEDD4L-225ENST00000589054 JPH4Q96JJ6 628 aa37.52■■■■□ 3.6
NEDD4L-225ENST00000589054 IGF1RP08069 1367 aa37.5■■■■□ 3.59
NEDD4L-225ENST00000589054 PRG4Q92954 1404 aaPredicted RBP37.49■■■■□ 3.59
NEDD4L-225ENST00000589054 KIF27Q86VH2 1401 aa37.37■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms