Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 PSMF1-210ENST00000484891 4030 ntTSL 26.52□□□□□ -1.372e-8■■■■□ 26.6
SUB1P53999 VAT1-209ENST00000592388 478 ntTSL 55.31□□□□□ -1.562e-8■■■■□ 26.6
SUB1P53999 CLASP2-219ENST00000487553 825 ntTSL 35.04□□□□□ -1.61e-7■■■■□ 26.6
SUB1P53999 NEDD8-208ENST00000560427 654 ntTSL 210□□□□□ -0.818e-8■■■■□ 26.6
SUB1P53999 NEDD8-204ENST00000526430 286 ntTSL 38.24□□□□□ -1.098e-8■■■■□ 26.6
SUB1P53999 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-7■■■■□ 26.6
SUB1P53999 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.432e-7■■■■□ 26.6
SUB1P53999 HSPA9-213ENST00000524109 1175 ntTSL 57.44□□□□□ -1.224e-7■■■■□ 26.6
SUB1P53999 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.112e-8■■■■□ 26.5
SUB1P53999 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.382e-8■■■■□ 26.5
SUB1P53999 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.682e-8■■■■□ 26.5
SUB1P53999 SPDYA-205ENST00000462832 2081 ntTSL 23.07□□□□□ -1.922e-8■■■■□ 26.5
SUB1P53999 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.487e-7■■■■□ 26.5
SUB1P53999 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.37■□□□□ 0.692e-6■■■■□ 26.5
SUB1P53999 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.242e-6■■■■□ 26.5
SUB1P53999 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.45□□□□□ -0.262e-6■■■■□ 26.5
SUB1P53999 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC10.94□□□□□ -0.662e-6■■■■□ 26.5
SUB1P53999 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.952e-6■■■■□ 26.5
SUB1P53999 UBC-204ENST00000536661 624 ntTSL 211.11□□□□□ -0.631e-34■■■■□ 26.5
SUB1P53999 UBC-211ENST00000542416 517 ntTSL 46.44□□□□□ -1.381e-34■■■■□ 26.5
SUB1P53999 PSMA4-215ENST00000559934 2741 ntTSL 1 (best)17.5■□□□□ 0.397e-18■■■■□ 26.5
SUB1P53999 PSMA4-207ENST00000558635 736 ntTSL 1 (best)8.02□□□□□ -1.137e-18■■■■□ 26.5
SUB1P53999 PSMA4-216ENST00000559948 710 ntTSL 56.35□□□□□ -1.397e-18■■■■□ 26.5
SUB1P53999 PSMA4-208ENST00000558639 733 ntTSL 35.75□□□□□ -1.497e-18■■■■□ 26.5
SUB1P53999 PSMA4-203ENST00000557929 635 ntTSL 55.75□□□□□ -1.497e-18■■■■□ 26.5
SUB1P53999 PSMA4-210ENST00000559146 674 ntTSL 25.69□□□□□ -1.57e-18■■■■□ 26.5
SUB1P53999 PSMA4-217ENST00000560033 570 ntTSL 45.65□□□□□ -1.57e-18■■■■□ 26.5
SUB1P53999 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.522e-29■■■■□ 26.4
SUB1P53999 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.219e-7■■■■□ 26.4
SUB1P53999 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.34□□□□□ -0.596e-7■■■■□ 26.4
SUB1P53999 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.34□□□□□ -0.596e-7■■■■□ 26.4
SUB1P53999 SNHG8-203ENST00000602520 327 ntTSL 25.24□□□□□ -1.576e-7■■■■□ 26.4
SUB1P53999 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.63□□□□□ -1.676e-7■■■■□ 26.4
SUB1P53999 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.779e-7■■■■□ 26.4
SUB1P53999 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.93□□□□□ -0.342e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.092e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.992e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.952e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.92e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.872e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.352e-9■■■■□ 26.4
SUB1P53999 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.352e-9■■■■□ 26.4
SUB1P53999 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.02□□□□□ -0.495e-8■■■■□ 26.4
SUB1P53999 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.313e-6■■■■□ 26.4
SUB1P53999 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.32□□□□□ -0.123e-17■■■■□ 26.4
SUB1P53999 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.092e-7■■■■□ 26.3
SUB1P53999 CORO1C-206ENST00000546705 577 ntTSL 310.26□□□□□ -0.772e-7■■■■□ 26.3
SUB1P53999 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.582e-7■■■■□ 26.3
SUB1P53999 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.82e-7■■■■□ 26.3
SUB1P53999 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.451e-8■■■■□ 26.3
SUB1P53999 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.461e-7■■■■□ 26.3
SUB1P53999 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC10.53□□□□□ -0.721e-7■■■■□ 26.3
SUB1P53999 B2M-206ENST00000559720 1220 ntTSL 56.58□□□□□ -1.366e-10■■■■□ 26.2
SUB1P53999 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.76□□□□□ -0.695e-7■■■■□ 26.2
SUB1P53999 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.95□□□□□ -0.54e-7■■■■□ 26.2
SUB1P53999 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.651e-6■■■■□ 26.2
SUB1P53999 ESYT1-206ENST00000550515 716 ntTSL 28.45□□□□□ -1.062e-8■■■■□ 26.2
SUB1P53999 COX5B-203ENST00000491989 611 ntTSL 36.4□□□□□ -1.381e-9■■■■□ 26.2
SUB1P53999 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.98■□□□□ 0.635e-8■■■■□ 26.1
SUB1P53999 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.135e-8■■■■□ 26.1
SUB1P53999 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.18■□□□□ 0.025e-8■■■■□ 26.1
SUB1P53999 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.1□□□□□ -0.155e-8■■■■□ 26.1
SUB1P53999 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.285e-8■■■■□ 26.1
SUB1P53999 TMEM208-212ENST00000567193 915 ntTSL 212□□□□□ -0.492e-7■■■■□ 26
SUB1P53999 TMEM208-204ENST00000563168 1525 ntTSL 211.63□□□□□ -0.552e-7■■■■□ 26
SUB1P53999 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.05□□□□□ -0.642e-7■■■■□ 26
SUB1P53999 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.752e-7■■■■□ 26
SUB1P53999 TMEM208-203ENST00000562235 775 ntTSL 210.23□□□□□ -0.772e-7■■■■□ 26
SUB1P53999 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC9.39□□□□□ -0.912e-7■■■■□ 26
SUB1P53999 ZNHIT3-202ENST00000612728 1981 ntTSL 1 (best)10.59□□□□□ -0.712e-6■■■■□ 26
SUB1P53999 ZNHIT3-206ENST00000619446 819 ntTSL 37.66□□□□□ -1.182e-6■■■■□ 26
SUB1P53999 ZNHIT3-210ENST00000620863 881 ntTSL 26.5□□□□□ -1.372e-6■■■■□ 26
SUB1P53999 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.372e-6■■■■□ 26
SUB1P53999 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC6.3□□□□□ -1.42e-6■■■■□ 26
SUB1P53999 ZNHIT3-205ENST00000617922 4420 ntTSL 25.41□□□□□ -1.542e-6■■■■□ 26
SUB1P53999 ZNHIT3-203ENST00000616269 616 ntTSL 35.29□□□□□ -1.562e-6■■■■□ 26
SUB1P53999 ZNHIT3-212ENST00000622312 567 ntTSL 45.23□□□□□ -1.572e-6■■■■□ 26
SUB1P53999 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.91□□□□□ -1.622e-6■■■■□ 26
SUB1P53999 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.576e-10■■■■□ 26
SUB1P53999 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.786e-10■■■■□ 26
SUB1P53999 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.786e-10■■■■□ 26
SUB1P53999 TMEM219-207ENST00000570255 926 ntTSL 29.03□□□□□ -0.966e-10■■■■□ 26
SUB1P53999 TMEM219-206ENST00000569481 443 ntTSL 38.23□□□□□ -1.096e-10■■■■□ 26
SUB1P53999 RPS3-213ENST00000529285 550 ntTSL 515.89■□□□□ 0.133e-33■■■■□ 26
SUB1P53999 RPS3-212ENST00000529173 1373 ntTSL 510.8□□□□□ -0.683e-33■■■■□ 26
SUB1P53999 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.223e-33■■■■□ 26
SUB1P53999 RPS3-207ENST00000526608 710 ntTSL 5 BASIC6.39□□□□□ -1.393e-33■■■■□ 26
SUB1P53999 ANXA7-201ENST00000372919 2174 ntTSL 1 (best)9.91□□□□□ -0.821e-6■■■■□ 26
SUB1P53999 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.161e-6■■■■□ 26
SUB1P53999 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.291e-6■■■■□ 26
SUB1P53999 EML2-205ENST00000586195 1952 ntTSL 216.78■□□□□ 0.281e-6■■■■□ 26
SUB1P53999 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.131e-6■■■■□ 26
SUB1P53999 EML2-215ENST00000588308 2062 ntTSL 215.26■□□□□ 0.031e-6■■■■□ 26
SUB1P53999 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.231e-6■■■■□ 26
SUB1P53999 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.824e-10■■■■□ 26
SUB1P53999 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.051e-6■■■■□ 26
SUB1P53999 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.124e-10■■■■□ 26
SUB1P53999 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.24□□□□□ -0.294e-10■■■■□ 26
SUB1P53999 EGFL7-207ENST00000492862 723 ntTSL 513.2□□□□□ -0.35e-8■■■■□ 26
SUB1P53999 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.334e-10■■■■□ 26
Retrieved 100 of 11,644 protein–RNA pairs in 121.1 ms